prot_H-paniculata_contig18271.4463.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18271.4463.1
Unique Nameprot_H-paniculata_contig18271.4463.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length241
Homology
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 9.380e-53
Identity = 100/242 (41.32%), Postives = 148/242 (61.16%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLV-LAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD++ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:   88 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 327          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 4.270e-52
Identity = 99/241 (41.08%), Postives = 147/241 (61.00%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + +   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L   ++T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER   L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  456 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERR-PLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 694          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 8.870e-52
Identity = 100/241 (41.49%), Postives = 147/241 (61.00%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  457 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 695          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.920e-51
Identity = 98/241 (40.66%), Postives = 145/241 (60.17%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            RR + AG  R+++PKLEE+     Q+G AV G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     +  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:    4 RRLIAAGTVREWKPKLEEIFREADQFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 242          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 1.370e-50
Identity = 94/232 (40.52%), Postives = 141/232 (60.78%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQ 231
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC++A N+ KR  I+ + A   P +  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R  ++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+
Sbjct:   81 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVE 310          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 5.000e-49
Identity = 97/241 (40.25%), Postives = 144/241 (59.75%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+ P      P+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  478 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAIKVIAE 716          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 6.280e-41
Identity = 76/194 (39.18%), Postives = 116/194 (59.79%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH 195
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+   Q  HW++  DC+N  N+ KR AI+ + A   P L   +A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T E++     L  EL  +G+ +N  K+ A+PP  H
Sbjct:  134 RRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 326          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.640e-39
Identity = 69/164 (42.07%), Postives = 104/164 (63.41%), Query Frame = 0
Query:    2 RRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENL 165
            RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+
Sbjct:   89 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENI 252          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.020e-38
Identity = 80/195 (41.03%), Postives = 116/195 (59.49%), Query Frame = 0
Query:   48 LRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            L  W++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  142 LGQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 334          
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.770e-37
Identity = 79/196 (40.31%), Postives = 115/196 (58.67%), Query Frame = 0
Query:   47 QLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 240
            Q  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T E +     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P  TDA+V+  A  V+ E
Sbjct:  528 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIETDAYVEDIAMKVITE 721          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL14_9PHAE9.380e-5341.32Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE4.270e-5241.08Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE8.870e-5241.49Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE2.920e-5140.66Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE1.370e-5040.52Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE5.000e-4940.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE6.280e-4139.18Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L4Y4_9PHAE1.640e-3942.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE2.020e-3841.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE2.770e-3740.31Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 100..199
e-value: 2.9E-5
score: 25.9
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 115..192
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 21..190
e-value: 1.9E-13
score: 50.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..211
score: 11.868

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18271contigH-paniculata_contig18271:2878..3600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18271.4463.1mRNA_H-paniculata_contig18271.4463.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18271 2878..3618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18271.4463.1 ID=prot_H-paniculata_contig18271.4463.1|Name=mRNA_H-paniculata_contig18271.4463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
MRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRH
WLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMD
TGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYL
DDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSHTPSER
EIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom