mRNA_H-paniculata_contig1826.4454.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1826.4454.1
Unique NamemRNA_H-paniculata_contig1826.4454.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: D8LC96_ECTSI (Peroxisomal membrane protein PEX16 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC96_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 1.030e-143
Identity = 256/515 (49.71%), Postives = 316/515 (61.36%), Query Frame = 3
Query:  168 PGVSKRAWSYTDFVRANPAGARTVESLLQYTGFFAPARLADRDVAIESGYALASLAAMAHDRILL---------GNSDDPPPLDVCLNTDDYDDISSNLNDIAGGDTAESSARLDANQKRRYSQMTVFADRMRVALSVLAHVQIVTEKIAGQYGGERRRRQTITYVETLKAISRLILLACTKEMVIGGGKYVRGGGRKKSPQCRRDATSTRNSFAWDSRSGNSASDAE------------APEIYTGKRSGVRLVVPPRGRVLWAGSGGLSTVGGSEFVDGACYYRRRGGSNACECESDVIDQSSKSSFNGDTVCGSCGVGVARPQHLWQNPAGSRTEDDVRDGDGGEEETGVSHAWLMAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGG--GSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHFYTSAS 1643
            P  S+  W Y +FVR NP  ARTVE+LL+Y+GFFAPAR ADRD++IESGYAL+SLAA+AHD+IL+         G  D         N D  D    +   IA G    SS RLD   + R S  TV A RMRVAL+++A+VQIV EK+A Q+GG RRR+Q I Y+ETLKA++RL+LLACT+EMV+GGG YV GG R+  P   R+          +    N A  +E             PE+YTGKRSGV+L+VPPR  V+W+G G  +  GG   +         G S          D SS SSF G   C + G G+     +      S      R+  GG+       AWLMAGEV++ILRPL YS+GCAA+G  SWRPWL+SLGMDA A+ CT RAGG  G++ALL P+G  G+                VPVLPYL++ Q  ELRRRK+LW LYLMRSPAFE+L EPV R AAG+F+GVP+ GG+A YALNMLLYVQRHHFYTSAS
Sbjct:    8 PRASEEGWCYANFVRHNPTAARTVETLLRYSGFFAPARFADRDLSIESGYALSSLAALAHDQILIHGQGGGLGRGGQDGG-----AANDDGLDGGQVHALGIAPG----SSIRLDPKNRERPSSTTVVAQRMRVALAMIANVQIVVEKLAAQHGGPRRRQQAIVYLETLKALARLLLLACTREMVVGGGSYVSGGNRRTPPLGNRNKAGAWREVDLNGARLNQAQSSEFAVDRPPSPPCPPPEVYTGKRSGVKLIVPPRASVVWSGRGRSNRSGGVSRLAATASSPSCGSSRRSADGVFQNDSSSSSSFRG---CANGGQGIGTGGSMEAASDESCVWRQRREAQGGQ-------AWLMAGEVIHILRPLAYSYGCAATGERSWRPWLISLGMDAAAFACTARAGGSSGAMALLTPIGEAGSSG--------------VPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A835Z8Q5_9STRA (Peroxisomal membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q5_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.670e-52
Identity = 156/487 (32.03%), Postives = 218/487 (44.76%), Query Frame = 3
Query:  195 YTDFVRANPAGARTVESLLQYTGFFAPARLADRDVAIESGYALASLAAMAHDRILLGNSDDPPPLDVCLNTDDYDDISSNLNDIAGGDTAESSARLDANQKRRYSQMTVFADRMRVALSVLAHVQIVTEKIAGQYGGERRRRQTITYVETLKAISRLILLACTKEMVIGGGKYVRGG----GRKKSPQCRRDATSTRNSFAWD-SRSGNSASDAEAPEIYTGKRSGVRLVVPPRGRVLWAGSGGLST-VGGSEFVDGACYYRRRGGSNACECESDVIDQSSKSSFNGDTVCGSCGVGVARPQHLWQNPAGSRTEDDVRDGD----------GGEEETGVSHAWLMAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLL 1607
            Y+ FV+ANP  A  +ES+L+Y+GF APA+  +R++ +E+GYA +SLA + HD I                                     ++ +    Q+            +R AL VLAH+++V EK+A   GG  RRRQ IT +E  KA+ RL +LA T+EM++ GG +  G     G+  + +      ST      D + +G       AP +Y GKR G +  +P R +     + GL     GS      C   + G               S +   G   C  CG+  A       + AG   E+D  DG+          G         AWL+ GE ++ +RP  YS  C   G  +W PWL+S+ +D  +  CT RA                 +  G  GNG A          L   Q  ELRRRK+ W+LYL+R+PAFE+L  P    AAG F GVP+ GGLASYAL MLL
Sbjct:   10 YSAFVKANPGTANLLESVLRYSGFLAPAQFGERELLVEAGYAASSLAGLLHDGI-------------------------------------NAPQQQHQQRSTGGHEEGVVATLRTALVVLAHIEVVAEKVAAASGGAVRRRQLITAIEVAKAVMRLTILALTREMLLAGGHHAPGAPPLRGQTIAGRVGSRVLSTVGLGLEDRAENGTGHGPPPAPVMYQGKRCGRKYALPARAQARHGSAPGLRLGANGSAPALNGCSSAQNG---------------SHTDMYGAASC--CGLQHAACGGGHGDGAGWMAEED-EDGELERHRRWLHAGRAPAPPPPKAWLLLGEGLHAIRPAAYSAACGRLGEAAWAPWLLSMSVDVASRACTARA----------------VEVRGGRGNGGA----------LTPEQRAELRRRKVQWVLYLLRTPAFELLLGPAATGAAGAFGGVPVLGGLASYALQMLL 415          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A1Y1I5V1_KLENI (Peroxisomal membrane protein PEX16 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5V1_KLENI)

HSP 1 Score: 89.7 bits (221), Expect = 3.200e-15
Identity = 59/156 (37.82%), Postives = 81/156 (51.92%), Query Frame = 3
Query: 1176 LMAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHFYTSAS 1643
            L AGEV+  +RPLVY       G   W+PWL+SLG+DA            S+AL+        RD  G    G            L + + +E+ RR++L LLYLMRSP FE++T+P   +   +   VPL G L S AL +   VQ ++FYT+AS
Sbjct:  444 LTAGEVLYAMRPLVYVLAMRKWGARKWKPWLLSLGVDAA-----------SMALIAAGDEVLKRDARGKGKEGEGG---------LTEQERSEMARRRVLLLLYLMRSPVFEMVTKPPAEAVGRVLWPVPLLGALTSKALEIFEGVQGYYFYTAAS 579          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A061RB81_9CHLO (Peroxisomal membrane protein PEX16 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RB81_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 5.350e-14
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 3
Query: 1176 LMAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVG-VLGNGVASIETVPVLPYLN--DTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHFYTSAS 1643
            L+ GEV+++ RP+VY       GV SWRPWL+SL +DA +            A LL LG   +  R   V      S++    L  ++    +  E +RRKL  +LYL+RSP FE  T+PV  +  G    VPL G +   AL +L+ VQR+  YTSAS
Sbjct:  242 LVLGEVMHLARPMVYCWLLRRYGVRSWRPWLISLLIDAAS------------ARLLSLGNCLSNPRPSSVYKERFTSLQYSRSLSAISWSSVEVKERQRRKLALILYLIRSPCFESATKPVLYNLNGFAGRVPLIGFVTEKALEILIGVQRYFTYTSAS 388          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A061S6T6_9CHLO (Peroxisomal membrane protein PEX16 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S6T6_9CHLO)

HSP 1 Score: 85.1 bits (209), Expect = 5.380e-14
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 3
Query: 1176 LMAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVG-VLGNGVASIETVPVLPYLN--DTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHFYTSAS 1643
            L+ GEV+++ RP+VY       GV SWRPWL+SL +DA +            A LL LG   +  R   V      S++    L  ++    +  E +RRKL  +LYL+RSP FE  T+PV  +  G    VPL G +   AL +L+ VQR+  YTSAS
Sbjct:  283 LVLGEVMHLARPMVYCWLLRRYGVRSWRPWLISLLIDAAS------------ARLLSLGNCLSNPRXSSVYKERFTSLQYSRSLSAISWSSVEVKERQRRKLALILYLIRSPCFESATKPVLYNLNGFAGRVPLIGFVTEKALEILIGVQRYFTYTSAS 429          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A7R9U860_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U860_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.190e-13
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 3
Query: 1176 LMAGEVVNILRPLVYSH-------------GCAASGVHSWRPWLVSLG---MDALAYTCTTRAGGGSVAL----LLPLG---RDGNRDRVGV-LGNGVASIETVPVLPYLNDT-QTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHFYTSAS 1643
            L+ GE+++ILRP ++               G      +S+  WL+  G   MD L+     R+ G ++A     LL LG    +  R   G   G G+ + E       +    Q  ELRRRK+ WLLYL+RSP F+++ EPV ++   +    PL G L++YA+ +L+++Q HHFYTS S
Sbjct:  171 LLLGEILHILRPFLFCVIERLVLRRQLRRLGKGEGPPNSYGSWLLLAGSFWMDFLS----DRSSGAALARREVDLLELGVRSAESLRSTTGPRTGTGILTREASLTRAMMRFAEQKEELRRRKMQWLLYLLRSPLFQLICEPVAKTTDKVLGRAPLIGSLSNYAMQLLMHIQSHHFYTSGS 347          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A1W0AC00_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC00_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.970e-13
Identity = 54/156 (34.62%), Postives = 76/156 (48.72%), Query Frame = 3
Query: 1179 MAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYAL-NMLLYVQRHHFYTSAS 1643
            +AGEV++ILRP++Y+  C      SW P+L S   + L   C++                           G+     + V P + +    ELRRRK+  LLYL+R+P F   T+P+  + A     VPL G L  +A+ N L Y QR HFYTSAS
Sbjct:  192 LAGEVLHILRPVIYAILCQRKTEQSWIPFLASFSTEILGIACSSA--------------------------GLEHSNKLSVDPLVAE----ELRRRKMCLLLYLLRNPFFSSATQPLADNVANATKPVPLLGRLLQFAIDNGLHYYQRRHFYTSAS 317          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A067BFH5_SAPPC (Peroxisomal membrane protein PEX16 n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BFH5_SAPPC)

HSP 1 Score: 80.9 bits (198), Expect = 5.450e-13
Identity = 52/156 (33.33%), Postives = 72/156 (46.15%), Query Frame = 3
Query: 1179 MAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYAL-NMLLYVQRHHFYTSAS 1643
            + GE+++ILRP+VY+  C      SW P+L S   + L   C++                             A  +  P +       T E RRRK+   LYL+R+P F  +T P+  S A     VP+ G L  +A+ N LLY QR HFYTSAS
Sbjct:  204 LTGEILHILRPVVYAVLCQRKSEQSWVPFLASFSTEVLGLLCSSAE---------------------------APTKATPAV-------TEEFRRRKMCLFLYLLRNPLFSSVTNPLADSVANATQPVPVLGRLIQFAIDNGLLYYQRRHFYTSAS 325          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: A0A1V9ZIW7_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIW7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.960e-13
Identity = 51/156 (32.69%), Postives = 70/156 (44.87%), Query Frame = 3
Query: 1179 MAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYAL-NMLLYVQRHHFYTSAS 1643
            + GE+++ILRP++Y+  C      SW P+L S   + L   C++R                                  P     +   T E RRRK+   LYL+R+P F  +T P+    A     VPL G L  +A+ N LLY QR HFYTSAS
Sbjct:  226 LTGELLHILRPVIYAVLCQRKTEQSWLPFLASFSTEVLGILCSSRE---------------------------------PSAKKASPAATEEWRRRKMCLFLYLLRNPFFSNVTHPLAEGVANATQPVPLLGRLVQFAIENGLLYYQRRHFYTSAS 348          
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Match: W7TST8_9STRA (Peroxisomal membrane protein PEX16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.110e-12
Identity = 132/546 (24.18%), Postives = 205/546 (37.55%), Query Frame = 3
Query:  192 SYTDFVRANPAGARTVESLLQYTGFFAPARLADR---DVAIESGYALASLAAMAHDRILLGNSDDPPPLDVCLNTDDYDDISSNLNDIAGGDTAESSARLDANQKRRYSQMTVFADRMRVALSVLAHVQIVTEKIAGQYGGERRRRQTITYVETLKAISRLILLACTKEMVIGGGKYVRGGGRKKSPQCRRDATSTRNSFAWDSRSGNSASDAEAPEI---YTGKRSGVRLVVPPRGRVLWAGSGGLSTVGGSEFVDGACYYRRRGGSNACECESDVIDQSSKSSFNGDTVCGSCG--VG-VARPQHLW--QNPAGSRTEDDVRDG---------DGGEEETGVSHAW---------------LMAGEVVNILRPLVYSH------------GCAASG-----------VHSWRPW----LVSLGMDALAYTCTTRAGGGSVALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLWLLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHFYTSAS 1643
            SY  FVR +    R +E L++   FF P+R  +    ++  E   A +++  + +D +LLG  + P                                            +    DR+ + L +++H +++ EKI+ + G +      + ++E LK + RL L++  ++        +  GGR   P   R   S R S         S++  E   +    +G  SGV         +L      ++    +E  +G  + R R         S+        S+NGD   GS    +G + R    W   +P+ S        G          G  E   V   W               L+AGE+++ILRPLV +             G A +            +HS  P     L+   MD ++Y CTT                      G L  G  +++          +   ELRRRK LWLLYL+R+P FE LT PV R+  G    +PL GGLASY+   L+Y+QRH   TS S
Sbjct:    6 SYISFVRNHALFVRPLEGLIRTVTFFLPSRFYENGNGEIVSEGALAASNVMTLVNDLVLLGPRNTP-------------------------------------------LLPKEEDRLGLTLLLISHTEVLAEKISMRLG-DGTDHLVVLWLEALKVLLRLRLVSLQQQHGGNANVVLLDGGRA-IPTFHRPVESARPS---------SSTPGETSSLGVKNSGATSGVEEDQEDEEVLLRVLPEEVARPKRAECREGQEWKRGRRTGRKFRYFSE--------SYNGDDDYGSNRHLIGDLTRCNARWTLSSPSPSSASSSTESGASTSPSAPTTGDCEGVAVGIEWTREERPEVAQARARLLLAGEILHILRPLVLASLRWALARRRRVKGRAVAAPPMGRSLRRGPLHSAAPESLLVLLPALMDLVSYQCTT----------------------GALNGGDNALK---------QSCEDELRRRKNLWLLYLLRTPVFEGLTHPVTRAVDGSLVRLPLVGGLASYSYQALIYIQRHFTLTSGS 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1826.4454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC96_ECTSI1.030e-14349.71Peroxisomal membrane protein PEX16 n=2 Tax=Ectocar... [more]
A0A835Z8Q5_9STRA4.670e-5232.03Peroxisomal membrane protein-domain-containing pro... [more]
A0A1Y1I5V1_KLENI3.200e-1537.82Peroxisomal membrane protein PEX16 n=1 Tax=Klebsor... [more]
A0A061RB81_9CHLO5.350e-1438.36Peroxisomal membrane protein PEX16 n=1 Tax=Tetrase... [more]
A0A061S6T6_9CHLO5.380e-1438.36Peroxisomal membrane protein PEX16 (Fragment) n=1 ... [more]
A0A7R9U860_9STRA1.190e-1333.70Peroxisomal membrane protein PEX16 n=1 Tax=Pinguio... [more]
A0A1W0AC00_9STRA4.970e-1334.62Peroxisomal membrane protein PEX16 n=1 Tax=Thraust... [more]
A0A067BFH5_SAPPC5.450e-1333.33Peroxisomal membrane protein PEX16 n=3 Tax=Saprole... [more]
A0A1V9ZIW7_9STRA6.960e-1332.69Peroxisomal membrane protein PEX16 n=1 Tax=Achlya ... [more]
W7TST8_9STRA1.110e-1224.18Peroxisomal membrane protein PEX16 n=2 Tax=Monodop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1826contigH-paniculata_contig1826:5014..8762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.0
Seed ortholog evalue7.3e-121
Seed eggNOG ortholog2880.D8LC96
Preferred namePEX16
KEGG koko:K13335
KEGG TC3.A.20.1,9.A.17.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005783,GO:0005789,GO:0006082,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007276,GO:0007283,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016557,GO:0016558,GO:0017038,GO:0019752,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0022615,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0031984,GO:0032501,GO:0032504,GO:0032581,GO:0032787,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042579,GO:0042760,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045046,GO:0045184,GO:0046394,GO:0046395,GO:0046907,GO:0048137,GO:0048232,GO:0048609,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072330,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0098588,GO:0098805,GO:0098827,GO:0106101,GO:1901575,GO:1901576
EggNOG free text desc.ER-dependent peroxisome localization
EggNOG OGsKOG4546@1,KOG4546@2759
Ec32 ortholog descriptionPeroxisome membrane protein, Pex16
Ec32 orthologEc-14_005580.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons4
Model size1646
Cds size1518
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1826.4454.1prot_H-paniculata_contig1826.4454.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1826 5014..8634 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929418.9067814-CDS-H-paniculata_contig1826:5013..59491622929418.9067814-CDS-H-paniculata_contig1826:5013..5949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 5014..5949 -
1691480853.2373643-CDS-H-paniculata_contig1826:5013..59491691480853.2373643-CDS-H-paniculata_contig1826:5013..5949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 5014..5949 -
1622929418.9249692-CDS-H-paniculata_contig1826:6390..66011622929418.9249692-CDS-H-paniculata_contig1826:6390..6601Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 6391..6601 -
1691480853.249931-CDS-H-paniculata_contig1826:6390..66011691480853.249931-CDS-H-paniculata_contig1826:6390..6601Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 6391..6601 -
1622929418.9453537-CDS-H-paniculata_contig1826:7094..73181622929418.9453537-CDS-H-paniculata_contig1826:7094..7318Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 7095..7318 -
1691480853.2620177-CDS-H-paniculata_contig1826:7094..73181691480853.2620177-CDS-H-paniculata_contig1826:7094..7318Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 7095..7318 -
1622929418.9633698-CDS-H-paniculata_contig1826:8487..86341622929418.9633698-CDS-H-paniculata_contig1826:8487..8634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 8488..8634 -
1691480853.2755857-CDS-H-paniculata_contig1826:8487..86341691480853.2755857-CDS-H-paniculata_contig1826:8487..8634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1826 8488..8634 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929418.9784791-UTR-H-paniculata_contig1826:8634..87621622929418.9784791-UTR-H-paniculata_contig1826:8634..8762Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1826 8635..8762 -
1691480853.2838347-UTR-H-paniculata_contig1826:8634..87621691480853.2838347-UTR-H-paniculata_contig1826:8634..8762Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1826 8635..8762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1826.4454.1

>prot_H-paniculata_contig1826.4454.1 ID=prot_H-paniculata_contig1826.4454.1|Name=mRNA_H-paniculata_contig1826.4454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=506bp
MMQRQRSQGVRNAPGVSKRAWSYTDFVRANPAGARTVESLLQYTGFFAPA
RLADRDVAIESGYALASLAAMAHDRILLGNSDDPPPLDVCLNTDDYDDIS
SNLNDIAGGDTAESSARLDANQKRRYSQMTVFADRMRVALSVLAHVQIVT
EKIAGQYGGERRRRQTITYVETLKAISRLILLACTKEMVIGGGKYVRGGG
RKKSPQCRRDATSTRNSFAWDSRSGNSASDAEAPEIYTGKRSGVRLVVPP
RGRVLWAGSGGLSTVGGSEFVDGACYYRRRGGSNACECESDVIDQSSKSS
FNGDTVCGSCGVGVARPQHLWQNPAGSRTEDDVRDGDGGEEETGVSHAWL
MAGEVVNILRPLVYSHGCAASGVHSWRPWLVSLGMDALAYTCTTRAGGGS
VALLLPLGRDGNRDRVGVLGNGVASIETVPVLPYLNDTQTTELRRRKLLW
LLYLMRSPAFEILTEPVGRSAAGLFDGVPLFGGLASYALNMLLYVQRHHF
YTSAS*
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mRNA from alignment at H-paniculata_contig1826:5014..8762-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1826.4454.1 ID=mRNA_H-paniculata_contig1826.4454.1|Name=mRNA_H-paniculata_contig1826.4454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3749bp|location=Sequence derived from alignment at H-paniculata_contig1826:5014..8762- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGAAAAACAAAATATTAGTCTCCTGCGGGAAGGTGACAGTTGGGACAGTT GGGACGGTTTGAAGCCCACTGAAGTCGGGTTGCTGCCGTTTTTCACTTGC TCACTACAAAAGATCTGCGTTGCTGATCATGATGCAGCGGCAGCGATCCC AAGGCGTTCGCAACGCCCCTGGAGTCTCGAAGAGAGCATGGTCCTATACC GATTTTGTGCGGGCTAACCCTGCTGGAGCGCGGACTGTAGAGAGTCTGCT TCAATATACAGGTTTCTTCGCTCCTGTGAGTTCTTCTTGCTGTAAGCATA ATAGTGAGAACCCTGGCGAGTCCTGCGAATAGGCGCAGGTCAGTTTAGTG GTTAATTGCAATTTTTCATCACTTAGCGTAACTGACTAGATGTCTTGGTG ACCTTTCGTGCAAGACATGAACGTGCAGTGCAGATGCGGCCCCGCCAGTA AGGAACCCTCGTTTGTGTCAAGGGTCAACACCTTAGTTAGGGTGGTGGGT TGAGCTATCTTTCTTATTCGCTACTTTCTCATTCATAAGCGCAAAGAAAA GGGCGTTTTCTTATGAGCCGTTTCAACTGAAGGGAAACAAGATGAGAAGC TCTTTTTTTTCAACCTAAACGCCTAATAGTTCTAGTGCGGACCTGTCTTT TAGTACCGAAATTGCTCTGTGACCAAGATGTAAAATTGAATGCGCTACGC CCAAAAACATCAGCCGAAAATAGGCTGTTCCGAATAACCCTTCACTAAAA TTAAAACAACTCGTCATCGAAACTGGATATTTGCTTCCCCCTTCAGTTGA AACCGCTCTACATCTTTGTTTCTTAGAGCTGTTCTAAACGCGTAAGTGTA TCTTTCTACTCTTATCCCTTCTTTCCGCTTTCCTCCTTTTTTGCTCTTCT GATAATTCCGTCGGAAGAGTCGAAATATGTTTCTTTCGGCTCTGAAATTT CGAAAATTCGAAGAGAAAACAAACTGCTTCAAGTATTCCAACAACTTGTG TGCGACGAAGTTCGCTGCAGTGCTGTCGTGATGTCTTAATTTGTTCAGGG GCAAAATCGCTCAGATTTGGGTACCATGCCGTAGAAGCTTTCGGAAACTC CACAAACCATAACTCTTCCGAATGTATGAATCGCTGGGGGAGGTCGGGGT CAAGTTAATCACGATGCTGCGAGGCTATTCTGCCGAAGGAACATAAGCCG ACACAAACAATAGAGCTCAACTTAACGTGAAGCAGGTTCACCCTCATTGT GCCCTCTACAGTTAACTTCCAAAATTAGGGGGAGTCTAGTTCGATTGAAG TGTATTTCTATTCTCTTTGTTTTAGATACGACCAAGGACAACTACAAACT AGAGGAATGTTTCTTCCCTTGTTTTTGACAACTGGTGCACTATTAGTATA GATAGTTGTTTGTCTTAACACTCGCTGCACTCGTTCGTGTCCAGGCTCGG CTTGCCGACAGGGATGTTGCCATCGAGTCCGGCTATGCTTTGGCAAGCCT CGCGGCCATGGCCCACGATCGAATTCTTCTGGGCAATAGCGACGATCCTC CGCCACTGGATGTATGCCTAAACACAGACGACTACGACGATATTTCATCA AACTTGAATGATATCGCTGGTGGTGACACGGCGGAATCAAGCGCACGACT AGATGCTAATCAGAAAAGGTGATGTTTCTATTTTCCCTCGTTCCCCCAAC AGATTTGTTCTTACAGTGCGCATGTTCACATCGTTGCACTACACTATATG GAGCAAGGATGCGCTCTTGTGCTGTCCAGTGTAGGGTTGTCGAGATCTGT AGAGGGCACTCGAAAGGCTCCAGACTGCCCCTCCTTGTCTTGAAATATAT CGAGTTGATAAATCTGGAGAGCACATGGATGTGACCCGCCTTTGAGCTAC CCATGACTATCGTGATCTTCGGCAATGCGTACAAAACAAGATCTACGAAA CGGACCATTTTCAAACACTAGTGACAATCGGTTGACTGGATACTGCAATG ATGAACCGCTCATCTGCGCGCATTAATGTTTTAACACCACCTCCAGGCTA TGCTACCTCGTTGTCTGGCTACGTTTCAAAGATTCGCTGCTTTGTTCCTA AAACGCTCACACAATATTCTGTCGTTCCACTGCTTTCCTCAAATCCTTTT TATTTCGTCAGGAGATATTCACAGATGACCGTGTTCGCAGACCGGATGCG GGTAGCTCTTTCCGTACTCGCGCACGTGCAAATCGTGACCGAGAAAATAG CAGGCCAGTACGGAGGCGAGCGAAGGAGGCGCCAGACAATCACCTACGTA GAAACCCTCAAAGCTATTAGTCGACTCATACTGCTTGCCTGCACCAAAGA AATGGTCATAGGCGGAGGAAAGGTGCGGTTTCAGACGCTGTTGCCGTTGT TGCTGTCGTTGTTGCGTTCCGTTCTTTATTGTTCGTACTTGGAGAGAGGA TATATTTATTTTGTCCAATGCCCCAATTTGGTCGTTTCTACATTTAAAAG TAACATTGTGGTGATGCTTTTTGCAGTGGATGGCATATACACAGTGCTGC CTGGAGTTGACAAGCATGCCTCGATTTCTATCCGGCAGCGGCGTAGGGCG CTGAGATGATCAAAAGCGCGCAATCAAAATTAGAAACCTATTCAACATCT AGGATTGTGGAACCAGTCCTCCCTTGCATATTTTTTTTCATGAGTCAAGT AGCTATTTGTGCAATGGTTTCCTGGCGAAGTTGATACATATATTTCATCC CGGGCAAACTGACGTGGTTATACCACTGCCTCGTTCACGTATCCAATGTT TCCCGTTTCACAGTACGTACGCGGAGGAGGGCGAAAAAAATCCCCGCAAT GTAGAAGAGACGCGACGAGCACCCGAAATTCTTTCGCGTGGGACTCCCGT TCTGGTAACTCTGCTTCCGACGCTGAGGCCCCCGAAATTTACACGGGAAA ACGCAGTGGTGTGAGGCTAGTGGTGCCGCCAAGGGGTCGCGTTCTCTGGG CTGGCAGTGGAGGGCTGTCTACTGTTGGCGGCTCCGAGTTTGTTGACGGT GCTTGTTACTACAGGCGAAGAGGAGGGTCCAACGCTTGTGAATGCGAAAG CGATGTCATCGACCAGTCGTCTAAATCTAGCTTCAACGGAGACACTGTGT GTGGTAGCTGTGGTGTTGGAGTGGCACGGCCACAGCATCTGTGGCAAAAT CCCGCAGGGAGCCGAACCGAGGACGACGTACGCGATGGCGATGGAGGCGA GGAAGAGACAGGTGTCTCGCATGCGTGGCTGATGGCGGGCGAAGTTGTGA ACATCCTACGACCGCTTGTGTATAGTCATGGTTGCGCTGCATCGGGGGTG CACTCGTGGCGGCCGTGGCTTGTTTCTCTAGGCATGGACGCCTTGGCATA CACTTGCACGACGCGAGCCGGCGGCGGCAGTGTTGCTCTTTTGCTTCCGC TGGGGAGGGATGGGAATCGGGATCGAGTTGGTGTCCTCGGAAACGGGGTT GCGTCCATCGAGACAGTACCAGTGTTACCGTACCTAAATGATACACAGAC GACGGAGCTGCGGCGGCGCAAACTGCTGTGGCTACTATACTTGATGCGAT CGCCGGCGTTCGAAATCTTGACCGAGCCGGTTGGTAGGAGCGCCGCCGGC TTGTTTGATGGCGTACCGCTGTTTGGCGGCCTTGCAAGTTATGCCCTAAA CATGCTGCTCTATGTTCAGCGGCATCACTTCTACACGTCCGCATCTTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig1826:5014..8762-

>mRNA_H-paniculata_contig1826.4454.1 ID=mRNA_H-paniculata_contig1826.4454.1|Name=mRNA_H-paniculata_contig1826.4454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3036bp|location=Sequence derived from alignment at H-paniculata_contig1826:5014..8762- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCAGCGGCAGCGATCCCAAGGCGTTCGCAACGCCCCTGGAGTCTC
GAAGAGAGCATGGTCCTATACCGATTTTGTGCGGGCTAACCCTGCTGGAG
CGCGGACTGTAGAGAGTCTGCTTCAATATACAGGTTTCTTCGCTCCTATG
ATGCAGCGGCAGCGATCCCAAGGCGTTCGCAACGCCCCTGGAGTCTCGAA
GAGAGCATGGTCCTATACCGATTTTGTGCGGGCTAACCCTGCTGGAGCGC
GGACTGTAGAGAGTCTGCTTCAATATACAGGTTTCTTCGCTCCTGCTCGG
CTTGCCGACAGGGATGTTGCCATCGAGTCCGGCTATGCTTTGGCAAGCCT
CGCGGCCATGGCCCACGATCGAATTCTTCTGGGCAATAGCGACGATCCTC
CGCCACTGGATGTATGCCTAAACACAGACGACTACGACGATATTTCATCA
AACTTGAATGATATCGCTGGTGGTGACACGGCGGAATCAAGCGCACGACT
AGATGCTAATCAGAAAAGGCTCGGCTTGCCGACAGGGATGTTGCCATCGA
GTCCGGCTATGCTTTGGCAAGCCTCGCGGCCATGGCCCACGATCGAATTC
TTCTGGGCAATAGCGACGATCCTCCGCCACTGGATGTATGCCTAAACACA
GACGACTACGACGATATTTCATCAAACTTGAATGATATCGCTGGTGGTGA
CACGGCGGAATCAAGCGCACGACTAGATGCTAATCAGAAAAGGAGATATT
CACAGATGACCGTGTTCGCAGACCGGATGCGGGTAGCTCTTTCCGTACTC
GCGCACGTGCAAATCGTGACCGAGAAAATAGCAGGCCAGTACGGAGGCGA
GCGAAGGAGGCGCCAGACAATCACCTACGTAGAAACCCTCAAAGCTATTA
GTCGACTCATACTGCTTGCCTGCACCAAAGAAATGGTCATAGGCGGAGGA
AAGGAGATATTCACAGATGACCGTGTTCGCAGACCGGATGCGGGTAGCTC
TTTCCGTACTCGCGCACGTGCAAATCGTGACCGAGAAAATAGCAGGCCAG
TACGGAGGCGAGCGAAGGAGGCGCCAGACAATCACCTACGTAGAAACCCT
CAAAGCTATTAGTCGACTCATACTGCTTGCCTGCACCAAAGAAATGGTCA
TAGGCGGAGGAAAGTACGTACGCGGAGGAGGGCGAAAAAAATCCCCGCAA
TGTAGAAGAGACGCGACGAGCACCCGAAATTCTTTCGCGTGGGACTCCCG
TTCTGGTAACTCTGCTTCCGACGCTGAGGCCCCCGAAATTTACACGGGAA
AACGCAGTGGTGTGAGGCTAGTGGTGCCGCCAAGGGGTCGCGTTCTCTGG
GCTGGCAGTGGAGGGCTGTCTACTGTTGGCGGCTCCGAGTTTGTTGACGG
TGCTTGTTACTACAGGCGAAGAGGAGGGTCCAACGCTTGTGAATGCGAAA
GCGATGTCATCGACCAGTCGTCTAAATCTAGCTTCAACGGAGACACTGTG
TGTGGTAGCTGTGGTGTTGGAGTGGCACGGCCACAGCATCTGTGGCAAAA
TCCCGCAGGGAGCCGAACCGAGGACGACGTACGCGATGGCGATGGAGGCG
AGGAAGAGACAGGTGTCTCGCATGCGTGGCTGATGGCGGGCGAAGTTGTG
AACATCCTACGACCGCTTGTGTATAGTCATGGTTGCGCTGCATCGGGGGT
GCACTCGTGGCGGCCGTGGCTTGTTTCTCTAGGCATGGACGCCTTGGCAT
ACACTTGCACGACGCGAGCCGGCGGCGGCAGTGTTGCTCTTTTGCTTCCG
CTGGGGAGGGATGGGAATCGGGATCGAGTTGGTGTCCTCGGAAACGGGGT
TGCGTCCATCGAGACAGTACCAGTGTTACCGTACCTAAATGATACACAGA
CGACGGAGCTGCGGCGGCGCAAACTGCTGTGGCTACTATACTTGATGCGA
TCGCCGGCGTTCGAAATCTTGACCGAGCCGGTTGGTAGGAGCGCCGCCGG
CTTGTTTGATGGCGTACCGCTGTTTGGCGGCCTTGCAAGTTATGCCCTAA
ACATGCTGCTCTATGTTCAGCGGCATCACTTCTACACGTCCGCATCTTGA
TACGTACGCGGAGGAGGGCGAAAAAAATCCCCGCAATGTAGAAGAGACGC
GACGAGCACCCGAAATTCTTTCGCGTGGGACTCCCGTTCTGGTAACTCTG
CTTCCGACGCTGAGGCCCCCGAAATTTACACGGGAAAACGCAGTGGTGTG
AGGCTAGTGGTGCCGCCAAGGGGTCGCGTTCTCTGGGCTGGCAGTGGAGG
GCTGTCTACTGTTGGCGGCTCCGAGTTTGTTGACGGTGCTTGTTACTACA
GGCGAAGAGGAGGGTCCAACGCTTGTGAATGCGAAAGCGATGTCATCGAC
CAGTCGTCTAAATCTAGCTTCAACGGAGACACTGTGTGTGGTAGCTGTGG
TGTTGGAGTGGCACGGCCACAGCATCTGTGGCAAAATCCCGCAGGGAGCC
GAACCGAGGACGACGTACGCGATGGCGATGGAGGCGAGGAAGAGACAGGT
GTCTCGCATGCGTGGCTGATGGCGGGCGAAGTTGTGAACATCCTACGACC
GCTTGTGTATAGTCATGGTTGCGCTGCATCGGGGGTGCACTCGTGGCGGC
CGTGGCTTGTTTCTCTAGGCATGGACGCCTTGGCATACACTTGCACGACG
CGAGCCGGCGGCGGCAGTGTTGCTCTTTTGCTTCCGCTGGGGAGGGATGG
GAATCGGGATCGAGTTGGTGTCCTCGGAAACGGGGTTGCGTCCATCGAGA
CAGTACCAGTGTTACCGTACCTAAATGATACACAGACGACGGAGCTGCGG
CGGCGCAAACTGCTGTGGCTACTATACTTGATGCGATCGCCGGCGTTCGA
AATCTTGACCGAGCCGGTTGGTAGGAGCGCCGCCGGCTTGTTTGATGGCG
TACCGCTGTTTGGCGGCCTTGCAAGTTATGCCCTAAACATGCTGCTCTAT
GTTCAGCGGCATCACTTCTACACGTCCGCATCTTGA
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