prot_H-paniculata_contig18256.4452.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18256.4452.1
Unique Nameprot_H-paniculata_contig18256.4452.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length254
Homology
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 3.610e-49
Identity = 108/307 (35.18%), Postives = 160/307 (52.12%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNAK-------------------------------------------------LRSMGSTPTISDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK-TLQLSQDKYVPSILDRFNM----SSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITY 252
            RW++++KA G+ KARL+VQGW Q HGIDCG ++APV R  SQ +L+A+A  + + +   DV  AFL +                                                  ++ +G T  +SDPCVY  G+  TY +L ++VDD  + G T  ++ D+  QL +KF  TD G   L+LGME+ ++   + +SQ KYV +ILD++ M     +  P   P+I+ +P  A      L     K Y  I  SL FLT  TR++I ++V+   R M+ PT QH+V  KRVLR+LRG PD+ + +
Sbjct:  940 RWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENA----IYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKF 1242          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 4.250e-49
Identity = 110/278 (39.57%), Postives = 154/278 (55.40%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDV---QVAFLNAKLRSMGSTP-----TI-------------SDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            +WVF+ KADG FK R+V QGW+Q  G+DCGS++APVCR++S R++  +    +      D     V  LN  L  +  +P     TI             SDPCVY    N   I L+L+VDD+L+ G     +  V  +L  +F  TD GE SL+L ME+ R++   TL +SQ+ Y  SIL+RF MS   PT  P   ++ S     D+LLD   T++Y  I  SL ++ Q  R+DI ++  Q AR M+ P++ H+VA K  LR+L G  D SITY 
Sbjct:  559 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYK 836          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 2.390e-48
Identity = 112/305 (36.72%), Postives = 157/305 (51.48%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFL------------------------------NAKLRSMGSTP-----TI-------------SDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            +WVF+ KADG FK R+V QGW+Q  G+DCGS++APVCR++S R++  +    +      DV  AFL                              N  L  +  +P     TI             SDPCVY    N   I L+L+VDD+L+ G     +  V  +L  +F  TD GE SL+LGME+ R++   TL +SQ+ Y  SIL+RF +S   PT  P   ++ S     D+LLD   T++Y  I  SL ++ Q  R+DI ++  Q AR M+ P++ H+VA K  LR+L G  D SITY 
Sbjct: 1201 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYK 1505          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.920e-47
Identity = 102/265 (38.49%), Postives = 149/265 (56.23%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNAKL-RSMGSTPTISDPCVYSKGS-------NHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            ++VF+ K DG FKARLVV G  Q  G D G S+APVCR+ S R+  A+    +W IY  D+  AFLNA   R +   P    P   +K S        +  ++L+++VDDIL+TG   +L+     +L ++F  TD GEV  ILG++V R+    TL +SQ+ YV ++L+RF M   NP   P    + S     D +L     K Y ++  S+ +L QCTRFD+ ++ +Q ++  S P Q ++ A K VLR+LRG P + I Y 
Sbjct:   28 KFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDIVGAFLNALCDRDVYVRPA---PGTSAKNSATGEPMVGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYK 289          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.770e-45
Identity = 104/305 (34.10%), Postives = 150/305 (49.18%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNAK------------------------------------------------LRSMGSTPTISDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            +WVF+ KA G FK RLV QGW+Q  G+DCG+++APVCR +S R+L  +A   +  +   DV  AFL A                                                 L  +G  P  SD CVY    +   + L+L+VDD+L+ G   + +  +  +L  +F  TD GEV L+LGME+ R++   TL +SQ+ Y  SIL+RF MS   PT  P   ++ S     D+LL    T+ Y  I   L ++ Q  R+DI ++  Q  R M+ P++ H+VA K  LR++ G  D  ITY 
Sbjct:  509 KWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLSEEETRRYQGIVGCLIYIAQVLRYDIMYATGQLTRPMAKPSKIHMVAAKHTLRYVAGTTDFRITYG 813          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5JST7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST7_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 7.520e-43
Identity = 103/277 (37.18%), Postives = 143/277 (51.62%), Query Frame = 0
Query:    5 FEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNA---------------------------KL-RSM-GSTPTISDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNKTLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISI 250
            F  K DG FKARLVV G  Q  G D G S+AP CR+ S R+  A+    +W IY  DV  AFLNA                           KL RS+ G + T SDPCVY   S +  ++L++ VDDIL+TG   +L+     +L ++F  TD GE     G       TL + Q+ YV ++L+R+ M   NP   P    + S     D +L     K Y ++  S+ +L QCTRFD+ F+V+Q ++  S P Q ++ A K VLR+LRG P ++I
Sbjct:   31 FNNKLDGRFKARLVVGGHRQEPGQDYGRSYAPSCRIRSIRVTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGELIVYKLERSLYGLSQTQSDPCVYVYTSGNIIVILTVNVDDILITGGDQQLVDQKKKELTDRFDMTDMGERDYEQG-------TLAMPQEHYVNTLLERYGMQEANPVSTPGYGAEISTNQPQDQILGPRDKKIYQSMMGSILYLAQCTRFDLSFAVLQLSKACSNPVQVNMTAAKHVLRYLRGNPVLTI 300          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.750e-41
Identity = 101/289 (34.95%), Postives = 146/289 (50.52%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNAKL---------------RSMGSTPTI-----------------SDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            ++VF+   DG FKARLVV G+ Q  G D G S+APVCR+   R+  A+    +W IY  DV  AFLNA                  S    P +                 SDPCVY   S +  ++L+++VDDIL+TG   +L+     +L ++F  TD GEV  ILG++V R+    TL +SQ+ YV ++L+RF M   NP                D +L     K Y ++  S+  L QCTRFD+ ++ +Q ++  S P Q ++ A K  +R+LRG P + I Y 
Sbjct:   28 KFVFKKDLDGRFKARLVVGGYRQEPGQDYGRSYAPVCRIGGIRMTCAIGCHHNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANP----------------DQILGPTDKKIYQSMTGSILNLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHDVRYLRGNPVLPIVYK 300          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 2.190e-41
Identity = 107/305 (35.08%), Postives = 149/305 (48.85%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFL------------------------------NAKLRSMGSTP-----TI-------------SDPCVYSKGSNHTYIMLSLFVDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            +WVF+ KADG FK R+V QGW+Q  G+DCGS++APVCR++S R++  +    +      DV  AFL                              N  L  +  +P     TI             SDPCVY    N   I L+L+VDD+L+ G     +  V  +L  +F  TD GE SL+LGME+ R++   TL +SQ+ Y  SIL+RF MS   PT  P   ++ S      +LLD   T++Y  I  S  ++    ++         AR M+ P++ H+VA K  LRFL G  D SITY 
Sbjct: 1366 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQYT------WLARPMAKPSKVHMVAAKHTLRFLVGTIDFSITYK 1664          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.130e-40
Identity = 100/271 (36.90%), Postives = 136/271 (50.18%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNAKLRSMGSTPTISDPCVYSKGSNHTYIML--SLF------------VDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            +WVF+ KADG FK RLV QGW+Q  G+DCGS++APVCRL+S R+L  +    +  +   DV  AF  A +             V  K      + L  SL+            +D  LV   +     D C  L   F  TD GEV L+LGME+ R+    TL +SQ  Y  SIL+RF MS   PT  P   ++ S     D+LL    T+ Y  I   L ++ Q  R+DI ++  Q AR M  P++ H+VA K  LR++ G  +  ITY 
Sbjct:  100 KWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDTCVYL---FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYATGQLARPMEKPSKIHMVAAKHTLRYVAGTTNFRITYK 367          
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Match: A0A6H5KER0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KER0_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 7.150e-39
Identity = 96/265 (36.23%), Postives = 140/265 (52.83%), Query Frame = 0
Query:    2 RWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALATAKDWTIYARDVQVAFLNAKLRSMGSTPTISDPCVYSKGSNHTYIMLSLFVDDI--LVTGPT------DKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNK---TLQLSQDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI--SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISITYS 253
            +WVF+ K DG FK RLV QGW+Q  G+DCGS++APVCRL+S R+L  +A   +  +   DV  AFL A +        +  P  +    N    ++      +  L   P       D  L+++ +  + KF  TD GEV L+LGME  R +   TL +SQ+ Y  SIL+RF MS   PT  P   ++ S     D+LL    T+ Y  I   L ++ Q  R+DI ++  Q AR M+ P++ H++A K  LR++ G  D  IT+ 
Sbjct:  529 KWVFKRKEDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILEK---LFVEQPLGFEVRDNDGGDLVMQLQKSLYGLAQSPRNWFHTIDPFLVEIGFVPL-KFKMTDMGEVKLVLGMETKRERNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRPYQGIVGCLMYIAQLLRYDIMYATSQLARPMAKPSKIHMMAAKHTLRYVAGSTDFRITFK 789          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18256.4452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE3.610e-4935.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNH5_9PHAE4.250e-4939.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE2.390e-4836.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGS8_9PHAE3.920e-4738.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL37_9PHAE1.770e-4534.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JST7_9PHAE7.520e-4337.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDK0_9PHAE1.750e-4134.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J842_9PHAE2.190e-4135.08Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KPN4_9PHAE2.130e-4036.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KER0_9PHAE7.150e-3936.23CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 84..173
e-value: 3.2E-14
score: 53.2
coord: 2..72
e-value: 1.3E-19
score: 70.9
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 97..244
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 97..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18256contigH-paniculata_contig18256:4261..5169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18256.4452.1mRNA_H-paniculata_contig18256.4452.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18256 3817..5193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18256.4452.1 ID=prot_H-paniculata_contig18256.4452.1|Name=mRNA_H-paniculata_contig18256.4452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp
MRWVFEVKADGIFKARLVVQGWSQNHGIDCGSSFAPVCRLESQRLLLALA
TAKDWTIYARDVQVAFLNAKLRSMGSTPTISDPCVYSKGSNHTYIMLSLF
VDDILVTGPTDKLLMDVCYQLMNKFTTTDFGEVSLILGMEVVRNKTLQLS
QDKYVPSILDRFNMSSVNPTKRPDIKTDPSAASNGDSLLDAAATKEYHAI
SLFFLTQCTRFDICFSVIQAARFMSAPTQQHLVAVKRVLRFLRGYPDISI
TYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like