prot_H-paniculata_contig18127.4392.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A131XNF9_9ACAR (Putative polyprotein (Fragment) n=1 Tax=Hyalomma excavatum TaxID=257692 RepID=A0A131XNF9_9ACAR) HSP 1 Score: 94.7 bits (234), Expect = 3.770e-20 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFSHFSRDMPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISGRVKK 122
+ +RT+ ++A E ++++ +DI AAYLN + E +++ P F + +D VCLL+KS YGL+QSGR WN TLD + G+ RS +P +Y S+ K ++V V DDL+I +K
Sbjct: 909 LKSIRTLLAIAVERNWKIHQVDITAAYLNGTLKETVYMEQPQTFVEYEKDE--VCLLKKSLYGLRQSGREWNFTLDKLLKSEGMTRSKADPCVYISK-----KQLIVGVYVDDLLIIAEDEK 1023
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A0S7FQF2_9TELE (POLX (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FQF2_9TELE) HSP 1 Score: 90.5 bits (223), Expect = 7.760e-20 Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFSHFSRD-MPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
M+ +R + LAA++D EL +D+ AYL+AP+ E+F+ P F + VC L KS YGLKQSGRNWN L DF++ I ++ + Y +S++ E+ IL+ + DDLII+
Sbjct: 1 MTSVRVLMQLAAQYDLELHQMDVKTAYLHAPIDCEIFLEQPEGFEVVTETGEKLVCKLNKSLYGLKQSGRNWNKMLHDFLIEIDFVQNPAD-YCVYSKENEHERVILI-IWVDDLIIAA 117
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A7D9JQ57_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JQ57_PARCT) HSP 1 Score: 90.1 bits (222), Expect = 8.970e-20 Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFSHFSRDMP-FVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
MS +R + A ++D + +D+ AYLNAP+ E+F+ P + ++ VC L KS YGLKQSGRNWNN L D+++ +S +P +Y R+ G + ++ + DDLIIS
Sbjct: 56 MSSIRILLQQAIQNDMLVHQMDVKTAYLNAPIDCEIFIEQPEGYERVGQNGERLVCKLNKSLYGLKQSGRNWNNMLHDYVMKESFTQSLADPCVYI-RNGGTNECTIIIIWVDDLIISA 173
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A6S7HC66_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HC66_PARCT) HSP 1 Score: 90.5 bits (223), Expect = 1.830e-19 Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFS-HFSRDMPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
MS +RT+ ++D + +D+ AYLNAP+ EL++ P F H VC L+KS YGLKQSGRNWNN L +++ G +S +P +Y R + ++ ++V V D++II+
Sbjct: 19 MSSIRTLLQRVVQNDMIIHQMDVKTAYLNAPIDCELYMEQPEGFEEHGENGEKLVCKLKKSLYGLKQSGRNWNNLLHEYLQKEGFTQSQADPCVYV-RMIDSKRCVIVIVWVDNIIIAA 136
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A6S7HTI9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HTI9_PARCT) HSP 1 Score: 91.7 bits (226), Expect = 4.510e-19 Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFS-HFSRDMPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
MS +RT+ ++D + +D+ AYLNAP+ EL++ P F H VC L KS YGLKQSGRNWNN L +++ G +S +P +Y R + ++ ++V V DD+II+
Sbjct: 873 MSSIRTLLQRVVQNDMIIHQMDVKTAYLNAPIDCELYMEQPEGFEEHGENGEKLVCKLNKSLYGLKQSGRNWNNLLHEYLQKEGFTQSQADPCVYV-RMIDSKRCVIVIVWVDDIIIAA 990
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A6S7K9T5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K9T5_PARCT) HSP 1 Score: 89.0 bits (219), Expect = 5.740e-19 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFS-HFSRDMPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
MS +RT+ ++D + +D+ AYLNAP+ EL++ P F H VC L KS YGLKQSGRNWNN L + + G +S +P +Y R + ++ ++V V DD+II+
Sbjct: 1 MSSIRTLLQRVMQNDMIIHQMDVKTAYLNAPIDCELYMEQPEGFEEHGENGEKLVCKLNKSLYGLKQSGRNWNNLLHENLQKEGFTQSQADPCVYV-RIIDSKRCVIVIVWVDDIIIAA 118
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A0S7FUV3_9TELE (COPIA n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FUV3_9TELE) HSP 1 Score: 90.5 bits (223), Expect = 7.230e-19 Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFSHFSRD-MPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
M+ +R + LAA++D EL +D+ AYL+AP+ E+F+ P F + VC L KS YGLKQSGRNWN L DF++ I ++ + Y +S++ E+ IL+ + DDLII+
Sbjct: 1 MTSVRVLMQLAAQYDLELHQMDVKTAYLHAPIDCEIFLEQPEGFEVVTETGEKLVCKLNKSLYGLKQSGRNWNKMLHDFLIEIDFVQNPAD-YCVYSKENEHERVILI-IWVDDLIIAA 117
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A6B0V3E7_IXORI (Putative polyprotein (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0V3E7_IXORI) HSP 1 Score: 85.9 bits (211), Expect = 3.130e-18 Identity = 43/119 (36.13%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFSHFSRDMPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISGR 119
+ +RT+ ++A E ++++ +DI AAYLN + E +++ P FS +D VCLL+KS YGL+QS + WN TLD + G+ RS +P +Y S+ E+ ++V V D L++
Sbjct: 61 LKSIRTLLAIAVERNWKIHQVDITAAYLNGTLKEAVYMEQPQPFSDCKKDE--VCLLKKSLYGLRQSAKEWNLTLDKLLKLQGMTRSKADPCVYVSK----ERRLIVGVYVDGLLVIAE 173
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.720e-18 Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFSHFSRD-MPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISGR 119
++ +R + ++A D EL+ +D+D AYL + + E+++V+ P + + VC LRKS YGLKQSGRNW+ +D + G G S+ +P LY E ++V + DDLII+G
Sbjct: 64 ITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEMLVIV-LYVDDLIIAGN 182
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Match: A0A7D9K6W0_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9K6W0_PARCT) HSP 1 Score: 89.0 bits (219), Expect = 3.770e-18 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 0
Query: 1 MSMLRTVFSLAAEHDFELEGLDIDAAYLNAPVIEELFVRLPSEFS-HFSRDMPFVCLLRKSQYGLKQSGRNWNNTLDDFIVGIGLDRSTTNPYLYFSRDVGEEKYILVAVCADDLIISG 118
MS +R + ++D + +D+ AYLNAP+ EL++ P F H VC L KS YGLKQSGRNWNN L +++ G +S +P +Y R + ++ ++V V DD+II+
Sbjct: 264 MSSIRALLQRVVQNDMIIHQMDVKTAYLNAPIDCELYMEQPEGFEEHGENGEKLVCKLNKSLYGLKQSGRNWNNLLHEYLQKEGFIQSQADPCVYV-RMIDSKRCVIVIVWVDDIIIAA 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18127.4392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig18127.4392.1 ID=prot_H-paniculata_contig18127.4392.1|Name=mRNA_H-paniculata_contig18127.4392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|