mRNA_H-paniculata_contig1812.4387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 238 bits (606), Expect = 7.950e-73 Identity = 119/260 (45.77%), Postives = 161/260 (61.92%), Query Frame = 1
Query: 1 LQRWLKEMADTRVKRRITPSLSLMHRMNQVDAILDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRPDPSRDFDGKIGIWHICVIKSAQ-------------SNSAWRER--------------ELDVTIEVEWYQEWYKDSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLV 699
++RW ++ + RI PSLS + +++D I D+ + +H+DE+WFYL+R++++V + GE+ G V H+SH+PK++ I A +RPDP+ DFDGKIGIW ICVI++AQ + S WRE E D TI+ EWY++WY D L+PA+KEKMPWL + +V QQDGA+ HTGK P LN G RGW V+LVTQPAQSPDLN+ND+G FASLK RVW +ID LV
Sbjct: 105 VRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 150 bits (380), Expect = 6.000e-38 Identity = 100/293 (34.13%), Postives = 154/293 (52.56%), Query Frame = 1
Query: 55 PSLSLMHRMNQVDAILDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRPDPSRD----FDGKIGIWHICVIKSAQSNSAWRERELDVT----IEVEWYQEWYKDSLVPALKEKMPWLEGE---EMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKIDPEAFDA 900
P L+ +++ +V+ IL+ N F F+ IHIDE WFYL R + ++LPGE ST + K+H+ KV+F+CAT+RP + FDGKIGIW V + A+ +S R + VT ++ E Y+ + ++PA+ EK W G E+ Q+D A H + ++ +GWN+ + TQP SPD+NV D+G F S++S +++R ID L+ V+ +D TL + SL L G N+ +L H R G+LP S+ DP+ +A
Sbjct: 235 PLLTAKNKLKRVEWILEHIDDNG-RFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEK--WPRGSSTPEIFIQEDNAKPHKAT-IREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTLPISIICDPDRINA 522
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.110e-34 Identity = 96/303 (31.68%), Postives = 152/303 (50.17%), Query Frame = 1
Query: 46 RITPSLSLMH---RMNQVDAILDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRPD----PSRDFDGKIGIWHICVIKSAQSNSAWRERELDVT----IEVEWYQEWYKDSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKIDPE---AFDAAVER 912
R+ P L+ H RM V L A + + T+HIDE WFY+ +Q R ++ +E V + + + K HI KV+F+ A +RP R +DG+IG+W + A +S R+R DVT + + Y+ + D ++PA++ K P + ++ QQD A H + P + GR GW + L +QPAQSPDLNV D+G F +++S + T+D LV V ++ + L++ +L + K G ND +L H + + G LP ++ D + A DA ER
Sbjct: 7 RLKPMLTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEGPLPTRLECDEDVCAAVDAMEER 307
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 140 bits (353), Expect = 2.550e-34 Identity = 89/262 (33.97%), Postives = 133/262 (50.76%), Query Frame = 1
Query: 130 FRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRP----DPSRDFDGKIGIWHICVIKSAQSNSAWRERELDVT-----IEVEWYQEWYKDSLVPALKEKMP--WLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKID 882
F + TIHIDE WFYL + ++ GE ST + K I KV+F+CA +RP D + FDGKIGIW V + AQ NS R R VT + YQ+ + ++PA++EK P W + + Q+D A H + + E R+ GWN+ + TQP SPD NV D+G FAS+++ +++R ID L+ V+ L + SL + +K G N +L+H ++ + +LP S+ D
Sbjct: 226 FEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPHHLRSRAA-VREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEALVETSTIALNSIFLSLQCALEESIKVQGNNSYKLRHMGKEKLLKEDNLPVSITCD 484
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 136 bits (342), Expect = 4.640e-33 Identity = 93/306 (30.39%), Postives = 150/306 (49.02%), Query Frame = 1
Query: 10 WLKEMADTRVKRRITPSLSLMHRMNQV----DAILDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRP----DPSRDFDGKIGIWHICVIKSAQSNSAWREREL-------DVTIEVEWYQEWYKDSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKID 882
W+KE I PSL+ ++++ +V + Q + R+ ++S +HIDE WFY+ + DR ++LP E+ + + K +I KV+F+CA SRP D +DGK+GI+ + AQ S R R VT EV ++ + ++PA+K K P +++ QQD AT H M G+ + L+ QPA SPD N+ D+G F +++S + + T+D LV V S + TL R+ SL ++L GGN ++ H QR LP ++++
Sbjct: 118 WVKEGKLRPHTNAIKPSLTNINKLARVRWSLSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEV--MRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITA-MDPDFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDRLQRTVGLPNVLEVE 419
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.420e-32 Identity = 95/320 (29.69%), Postives = 156/320 (48.75%), Query Frame = 1
Query: 1 LQRWLKEMADTRVKRRITPSLSLMHRM---NQVDAILDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRPDPS----RDFDGKIGIWHICVIKSAQSNSAWRERELDVTIEVEW----YQEWYKDSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTE------TKERQRRGSLPKSVKIDPEAFDAAVE 909
L R +K R R+ P L+ HR+ N + + + R + +HIDE WFY I Q +R L +E + Q K HI KV+F+CA +RP + +DGK+G+W + A+ S R+R VT+ + Y+ + D ++PA++ + P G + QQD A H D P L GR GWN+ L+ QPAQSPD NV D+G F +++S + TID L++ V+ ++ L++ +L + +++ G N +L H + T+ + R S + V + E+ ++ +E
Sbjct: 117 LWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFY-ITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKDMQFKTRVTELRPSCDEDVLLAIESMESRLE 434
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D) HSP 1 Score: 134 bits (338), Expect = 5.990e-32 Identity = 89/293 (30.38%), Postives = 150/293 (51.19%), Query Frame = 1
Query: 49 ITPSLSLMHRMNQVDAILDQAARNRI----TFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRPDPSRD----FDGKIGIWHICVIKSAQSNSAWRERELDVTIEVEWYQEWYK--------DSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKI 879
I PS++ H+ ++ IL + + F S + IHIDE WFY+ R+ R ++L GEE Q+ +++ KV+F+C +RP + FDGK+GI+ A+ +S RER TIE++ K D L+PA++ K PW ++++ QQD + H + L+ ++ G+N+ L+ QP QSPDLNV D+G F +++S ++ ++ LV+ VK Y+A+D + L ++L GGN+ + H + G LP +V++
Sbjct: 234 IKPSVTAAHKTQRIQWILSKIIPRTVHSGPKFSSLYNVIHIDEKWFYMSRKTQRYYLLAGEEEPYRA-TQNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERG---TIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLDAATQE-GFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEILGVKGGNNYKSPHKGKAKMDNLGLLPDTVEV 521
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF) HSP 1 Score: 133 bits (334), Expect = 6.340e-32 Identity = 86/282 (30.50%), Postives = 139/282 (49.29%), Query Frame = 1
Query: 106 QAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRP----DPSRDFDGKIGIWHICVIKSAQSNSAWREREL-------DVTIEVEWYQEWYKDSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKIDPEAFDAAVERWI 918
Q + R+ ++S +HIDE WFY+ + DR ++LP E+ + K I KV+F+CA SRP D +DGK+GI+ + Q S R R VT EV ++ + ++PA+K + P +++ QQD AT H M + + G+ + L+ QPA SPD N+ D+G F +++S + + T+D LV V S + TL R+ SL ++L+ GGN ++ H QR LP ++++ E V +W+
Sbjct: 154 QITQGRVPYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEV--MRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITA-MDPEFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVE-EGVVREVLQWL 430
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.540e-32 Identity = 92/302 (30.46%), Postives = 149/302 (49.34%), Query Frame = 1
Query: 46 RITPSLSLMHRMNQVD---AILDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTEVQHKSHIPKVIFICATSRP----DPSRDFDGKIGIWHICVIKSAQSNSAWRERELDVTIEV----EWYQEWYKDSLVPALKEKMPWLEGEEMVAQQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKIDPEAFDAAVERWI 918
R+ P ++ H+ ++V+ A + + ++ + +HIDE WFYL R ++ E+ V + K HI KV+F+ A +RP R +DGKIG+W + AQ S RER VT V + Y+E+ + ++P +K+ P + QQD A H D + G GW++ LV QPA SPD NV D+G F S+++ RE ID LV V +D D + L++ +L + LK G N +L H++ + R G + + V DP+ ++V+ ++
Sbjct: 132 RLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDED-VPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVD-DAAVTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLPHSKKDKTARLGPVARVV-CDPDTKRSSVKMYL 430
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Match: A0A0W8C4B7_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C4B7_PHYNI) HSP 1 Score: 129 bits (323), Expect = 3.880e-31 Identity = 92/326 (28.22%), Postives = 154/326 (47.24%), Query Frame = 1
Query: 37 VKRRITPSLSLMHRMNQVDAI------LDQAARNRITFRSDFQTIHIDEAWFYLIRQRDRVHILPGEERVGSTE-----VQHKSHIPKVIFICATSRPDPSRDFDGKIGIWHICVIKSAQSNSAWRE------RELDVTIEVEWYQEWYKDSLVPALKEKMPWLEGEEMVA--------QQDGATLHTGKDMPRKLNELGRDRGWNVDLVTQPAQSPDLNVNDMGVFASLKSRVWRERYGTIDGLVEGVKSMYDAFDAATLERMRQSLFTRYNQVLKAPGGNDVQLQHTETKERQRRGSLPKSVKIDPEAFDAAVERWIDGNEERC 939
++R +T + L+ ++ D + + Q+ + F + T+H+DE WFY+ + +V++L G++ + VQ K HI KV+F+CA +RP ++DGK+G+W + Q S R+ R + +T EV Y+ + ++PA+K K W+ E + QQD A H D P L G GW++ QPAQSPDLNV D G F +++S T + L+ V+ + + TL + S+ +++ GGN L H + + R G LP S+ DP + A + + + C
Sbjct: 11 LRRSLTQTRPLLTEKHKTDRLKWCLLHVTQSTDRQPVFAPMYDTVHVDEKWFYVKKIGQKVYLLTGQDGTPCEDAPVQFVQSKRHILKVMFLCAVARP--RGNWDGKVGMWPVVEKYVTQRRSVNRDAGVEELRPISMTREV--YRRMLLEDVIPAIKAKWEWVRDEGLGVPLVSPIWVQQDNAKPHVLPDDPEVL-VAGCAGGWSILFRNQPAQSPDLNVLDCGFFNAIQSLQSVTVPRTAEDLISEVERAFASTTTTTLNKTFLSVQLIMQSIMRHNGGNAFGLSHIQKDKLLRAGELPDSLSCDPALYRATLAKVVPQRATTC 331 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1812.4387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1812.4387.1 >prot_H-paniculata_contig1812.4387.1 ID=prot_H-paniculata_contig1812.4387.1|Name=mRNA_H-paniculata_contig1812.4387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=306bp MADTRVKRRITPSLSLMHRMNQVDAILDQAARNRITFRSDFQTIHIDEAWback to top mRNA from alignment at H-paniculata_contig1812:7470..8408- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1812.4387.1 ID=mRNA_H-paniculata_contig1812.4387.1|Name=mRNA_H-paniculata_contig1812.4387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=939bp|location=Sequence derived from alignment at H-paniculata_contig1812:7470..8408- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1812:7470..8408- >mRNA_H-paniculata_contig1812.4387.1 ID=mRNA_H-paniculata_contig1812.4387.1|Name=mRNA_H-paniculata_contig1812.4387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at H-paniculata_contig1812:7470..8408- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |