prot_H-paniculata_contig1809.4371.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1809.4371.1
Unique Name	prot_H-paniculata_contig1809.4371.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	582

Homology

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BLAST of mRNA_H-paniculata_contig1809.4371.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 5.200e-168
Identity = 322/651 (49.46%), Postives = 402/651 (61.75%), Query Frame = 0

Query:    3 SWTKGDRKARRELERALACDNDDHVTRFALLRLLANKGEWVAAEDLLSGPEVEAKLLADPTTHVACLSSLGEAYLVLWKARGQY------SQGENGQGGGTNNACELEWRLDVSGDRREILHKAQGFLEEALTAPENVNDPVLRAQV-------------------------------------------AFCKEARGDCSGALSIYAGIITDCPLSPGTSAVIFRTSVLLAHVGRFDECVRYLEFIEGDPPRGCSQLLLEALHYICNVTIGLELKVSKRIPALREAYHNEFDAGRMGTGFDREKVPWDRLPAWPCMWQELGERSLRRGDYYLGVMMSSQALLIKEDASTLVSTGEMLWVLGDVKRALEYCERAYAADASYAGAKRRLAGWAPEKWKERIAKEEDRRRAVAEMQRLAARSGKKADAMIARRGQREKARVFKMWRRLHYKFKHMAYRRASAADEGAVTA----------------QHTRKRQNEGVTNSTGXXXXXXXXXXXXXXXXXXVSVSTLSSESTQSQKHTTGRLGGAARWSPAVAPSGGTVTTGFPGSTTSQQEKVHFPTPSAEQAEQAGRANFQACFRMERAKLLGMDKGVNNGGVGVGRVGGVAATDNN------MAPVEAGATAVREAMMGGG 582
            +WTKGD +A+++LE++L+ D DDHVTRFAL+RLLA+K E  AAE+LL GP VE +LLADP T VA LSSLG AYL+LW+ARG+       S+   GQG  T    E+  RLDVS +R ++LH+AQ FLEEAL +PEN+NDP +RAQV                                           AFCKEARGD   AL++YA II+D  LSPG SAVIFRTSVLLA+VGR DECVRYLEFIEG PP+GCS LL++AL Y C V++GLE+KVS+R+  LREAY++E+ AGRMG GF R+++PWDRLP W  MW+ELG  S+R G+YY G+ M SQA L ++D  T+V T EMLWVLG+ KRAL  CERAYAAD  + GA+RRL+GWAP+KWKERI KEE+RR A+ EM+RLA  S KKADAM+ARR +REKAR  + WRRLH K KH   R  S   E A T                 + +    +   + S+ XXXXXXXXXXXXXXXXXX      SS S + Q   +     +A  +P   P                     FP PSA +A +AGR+NF ACFR E  + +   +                AT+++      MA V+  A A+ EAM GGG
Sbjct:    4 AWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEI--RLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHR--RSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEP---------------------FPVPSAAEAAEAGRSNFSACFRAETERAMRRKR---------------EATEHHGEMPMDMASVKVAAEAIHEAMRGGG 614

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1809.4371.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1809.4371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L576_9PHAE	5.200e-168	49.46	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 262..342

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1809	contig	H-paniculata_contig1809:7625..13621 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1809.4371.1	mRNA_H-paniculata_contig1809.4371.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1809 7625..13621 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1809.4371.1 ID=prot_H-paniculata_contig1809.4371.1|Name=mRNA_H-paniculata_contig1809.4371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=582bp
MSSWTKGDRKARRELERALACDNDDHVTRFALLRLLANKGEWVAAEDLLS
GPEVEAKLLADPTTHVACLSSLGEAYLVLWKARGQYSQGENGQGGGTNNA
CELEWRLDVSGDRREILHKAQGFLEEALTAPENVNDPVLRAQVAFCKEAR
GDCSGALSIYAGIITDCPLSPGTSAVIFRTSVLLAHVGRFDECVRYLEFI
EGDPPRGCSQLLLEALHYICNVTIGLELKVSKRIPALREAYHNEFDAGRM
GTGFDREKVPWDRLPAWPCMWQELGERSLRRGDYYLGVMMSSQALLIKED
ASTLVSTGEMLWVLGDVKRALEYCERAYAADASYAGAKRRLAGWAPEKWK
ERIAKEEDRRRAVAEMQRLAARSGKKADAMIARRGQREKARVFKMWRRLH
YKFKHMAYRRASAADEGAVTAQHTRKRQNEGVTNSTGSSSSSSFSSSSSS
SPFSGVSVSTLSSESTQSQKHTTGRLGGAARWSPAVAPSGGTVTTGFPGS
TTSQQEKVHFPTPSAEQAEQAGRANFQACFRMERAKLLGMDKGVNNGGVG
VGRVGGVAATDNNMAPVEAGATAVREAMMGGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf