mRNA_H-paniculata_contig18053.4358.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: D8LS60_ECTSI (Pantoate--beta-alanine ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS60_ECTSI) HSP 1 Score: 345 bits (886), Expect = 9.760e-117 Identity = 178/225 (79.11%), Postives = 201/225 (89.33%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAGRRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVGEAGAVVSVALRLGTVRLIDNIVLPPL 675
+DLD YPRQL+ DLELL EGLVDLVFAP+R EMYS HRIYVDP+GFDDLPEGVARPGFFRGVATVVTKLLNVVQPD A+FGQKDALQC+LVKRLVEDLN PV VVVS+T RE DGLAMSSRN YMS +ERAAAP V+ +L AAA+ RQR A AGR A+R+EL+ AAE V++AQPL+TSVDYLSVGSP TMEEL+E+G+AGAVVSVA+RLG+VRLIDN+VLPPL
Sbjct: 125 EDLDRYPRQLEQDLELLGGEGLVDLVFAPTREEMYSPDHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDLAFFGQKDALQCVLVKRLVEDLNMPVTVVVSETTREADGLAMSSRNAYMSAEERAAAPAVYLSLRAAADARQREADAGRNASREELVAAAEEVISAQPLITSVDYLSVGSPATMEELEEIGQAGAVVSVAVRLGSVRLIDNVVLPPL 349
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: A0A835YM10_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM10_9STRA) HSP 1 Score: 246 bits (629), Expect = 4.060e-78 Identity = 137/230 (59.57%), Postives = 164/230 (71.30%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAGRRATRQ------ELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVGEAGAVVSVALRLGTVRLIDNIVLPP 672
+D D YPRQL+ D+ LL EGL DLVFAP+ MY H +YVDP G + L EG ARPGFFRGVATVV KL NVVQPD AYFGQKDALQC++++R+V DLNFP++V V T R+ DGLA+SSRN Y++ DERAAAPVV RAL AA QR AA A +L A LAA+PLV +V+Y+SVG TM EL+ V AGAVVSVA+++G VRLIDN+VL P
Sbjct: 95 EDFDKYPRQLEKDVALLHKEGLADLVFAPTSAVMYGPHHCVYVDPHGVEALSEGAARPGFFRGVATVVAKLFNVVQPDAAYFGQKDALQCVVIRRMVADLNFPLKVRVLPTARDADGLALSSRNAYLTPDERAAAPVVHRALLAARAAWQRGVAAAAAAXXXXXXXXADLEAVARAELAAEPLVAAVEYVSVGCRETMAELESVTAAGAVVSVAVKVGGVRLIDNMVLGP 324
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: A0A485LIB8_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIB8_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.050e-69 Identity = 124/228 (54.39%), Postives = 161/228 (70.61%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAE-----TRQRAAAAGRRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEV-GEAGAVVSVALRLGTVRLIDNIVL 666
+D D YPR L+ DL LL VD+VF P+R MYS S R YVDP GF+D+PEG RPGFFRGVATVVTKL N+V P A+FGQKDA+QC+++KRL++DLNFP+E+ V DT RE GLAMS+RN Y++ DER A+ V+++ L+AAAE T R AA RAT E V +PL+ S+ Y+S+ S TMEEL +V + GA++S+A+++G RLIDNIVL
Sbjct: 93 EDFDKYPRTLEADLALLKRHN-VDIVFTPTRDSMYSPSFRTYVDPEGFNDVPEGQCRPGFFRGVATVVTKLFNIVTPTHAFFGQKDAVQCVVIKRLIDDLNFPIELNVLDTCREESGLAMSTRNQYLTPDERLASAVIYKGLKAAAEHFQTSTAPRIPAAALRAT-------IESVYKTEPLLQSIQYISIASKETMEELDDVVKDEGAIISIAVKVGKCRLIDNIVL 312
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: A0A1V9Z4S1_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4S1_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.870e-69 Identity = 122/223 (54.71%), Postives = 153/223 (68.61%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAGRRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVG-EAGAVVSVALRLGTVRLIDNIVL 666
+D D YPR + D+ L ++G VD+VF P+ MY HR YVDP GFDD+PEG RPGFFRGVATVV KL N+V P A+FGQKDA+QC+++KRL+EDLNFP+++ V DT+RE DGLAMS+RN Y+S ER+AA V++ L A AA G L E + A+PLV + Y+SVGS TMEEL EV AGAV+SVA+ +G RLIDNIVL
Sbjct: 89 EDFDKYPRTFEADMAALRAQG-VDIVFVPTTSVMYLPDHRTYVDPTGFDDVPEGTCRPGFFRGVATVVAKLFNIVAPTHAFFGQKDAVQCVVIKRLIEDLNFPIDLRVLDTKREADGLAMSTRNQYLSPSERSAAKVLYAGLRQAKIDFD--AAPGPTIPAAVLRATIETIYRAEPLVGEIQYISVGSKETMEELDEVDTNAGAVISVAVTVGKCRLIDNIVL 308
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: A0A7S2ESW5_TRICV (Pantoate--beta-alanine ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ESW5_TRICV) HSP 1 Score: 222 bits (565), Expect = 7.890e-69 Identity = 126/226 (55.75%), Postives = 157/226 (69.47%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQ--RAAAAGRRAT--RQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVGEAGAVVSVALRLGTVRLIDNIVL 666
+DLD YPRQL+ D ELLA G VD +FAP MY +H YVDP GFDD EG +RPG FRGVATVVTKL N+V+PD AYFGQKDA QC+ ++R+ DL+ V V V DT RE DGLAMSSRN Y++ +ER AAPVV+R+L AA + + R G +A EL VL ++ LV+ V Y++V S TM L+EVGE GAV+S+A ++G+VRLIDNIVL
Sbjct: 74 EDLDRYPRQLERDTELLAESG-VDHLFAPDGDAMYGENHVTYVDPTGFDDTSEGRSRPGHFRGVATVVTKLFNIVRPDVAYFGQKDAAQCVAIRRIASDLDMDVRVEVLDTVREGDGLAMSSRNAYLTDEERRAAPVVYRSLVAARDVMRGRRGEEGGSKAKVKASELEGVVREVLGSERLVSEVQYVAVDSKETMRPLEEVGEEGAVISLACKVGSVRLIDNIVL 298
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: A0A2D4CFE5_PYTIN (Pantoate--beta-alanine ligase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFE5_PYTIN) HSP 1 Score: 219 bits (559), Expect = 1.750e-68 Identity = 123/223 (55.16%), Postives = 151/223 (67.71%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAGRRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVG-EAGAVVSVALRLGTVRLIDNIVL 666
+D YPR D+ LL SEG VD VF PS MYS HR YV P GFDDLPEG RPG FRGVATVVTKL NVVQP A+FGQKDA QC+L+KRLVEDLN ++V V RE DGLA+S+RN Y+S +ERAAAP V+R L A E Q AA A + + + + A+PL+ + Y+S+GS TMEE++E+ + GA++SVAL+LG RLID I L
Sbjct: 37 EDYSKYPRTFDSDMALLRSEG-VDYVFVPSADAMYSKHHRCYVTPEGFDDLPEGRCRPGHFRGVATVVTKLFNVVQPTHAFFGQKDAAQCVLIKRLVEDLNMDIQVEVVPVCREQDGLALSTRNQYLSKEERAAAPAVYRGLRIAKE--QFAAQADATVSAESIRSIIRDEYEAEPLIKEIQYISIGSKETMEEIEEIRTDEGAIISVALKLGNCRLIDTITL 256
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: K0SVB4_THAOC (Pantoate--beta-alanine ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVB4_THAOC) HSP 1 Score: 219 bits (559), Expect = 6.360e-68 Identity = 117/223 (52.47%), Postives = 154/223 (69.06%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAG-RRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVGEAGAVVSVALRLGTVRLIDNIVL 666
+DLD YPRQL+ D++LL+ G V VF PS MY +H YVDP GFD+ EG++RPGFFRGVATVVTKL N+VQP AYFGQKDA+QC L+KR+ EDL+ + + + DT RE DGLAMSSRN Y+S +ER AP+V+ +L AA E + G + +L E VL +PLVT V Y+++ TM+ + +VG+ G V+S+A +G+VRLIDNIVL
Sbjct: 76 EDLDRYPRQLEKDVKLLSEVG-VSHVFTPSADSMYKKNHVTYVDPCGFDNTMEGISRPGFFRGVATVVTKLFNIVQPTSAYFGQKDAVQCALIKRITEDLDMDINIKIMDTVREDDGLAMSSRNAYLSEEERRRAPIVYTSLMAAREVFDSRLSRGVETVSADDLREVVEGVLETEPLVTEVQYVAIDDTTTMQPISDVGDGGCVISLACVVGSVRLIDNIVL 297
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: T0QY43_SAPDV (Pantoate--beta-alanine ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QY43_SAPDV) HSP 1 Score: 219 bits (559), Expect = 8.080e-68 Identity = 122/228 (53.51%), Postives = 154/228 (67.54%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAA-----AETRQRAAAAGRRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVGEA-GAVVSVALRLGTVRLIDNIVL 666
+D D YPR + D+ L +G VD+VFAP+ MY HR YVDPVGFDD+PEG RPGFFRGVATVV KL N+V P A+FGQKDA+QC+++KRL+EDLNFP+ + V DT RE DGLAMS+RN Y+S DER A+ +++ L A A T AA RAT E + +PLV + Y+S+GS TMEEL +V GAV+SVA+++G RLIDNIVL
Sbjct: 87 EDFDKYPRTFEADMAKLREQG-VDIVFAPTTATMYLPDHRSYVDPVGFDDVPEGQCRPGFFRGVATVVAKLFNIVSPTHAFFGQKDAVQCVVIKRLIEDLNFPITLRVMDTMREDDGLAMSTRNQYLSPDERVASSILYAGLRQAKADFDAATTATLPAATLRAT-------IERIYRTEPLVGEIQYISIGSKATMEELVDVDTTQGAVISVAVKVGACRLIDNIVL 306
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: B8C9Z7_THAPS (Pantoate--beta-alanine ligase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9Z7_THAPS) HSP 1 Score: 217 bits (552), Expect = 2.650e-67 Identity = 119/223 (53.36%), Postives = 152/223 (68.16%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAG-RRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVGEAGAVVSVALRLGTVRLIDNIVL 666
+DLD YPRQL+ D ELL G VD +FAPS MY +H YV+P+GFD EG++RPG FRGVAT+VTKL N+VQP AYFGQKDA+QC+L++R+ EDL+ V V + DT RE DGLAMSSRN Y+S +ER A VV+++L AA E + A G T +L VL +PL+T V Y++V TM+ ++ VG G V+S+A LG VRLIDNIVL
Sbjct: 43 EDLDKYPRQLERDAELLGKIG-VDHIFAPSSDTMYGKNHVTYVEPMGFDKTTEGISRPGHFRGVATIVTKLFNIVQPTNAYFGQKDAVQCVLIRRIAEDLDMDVNVQIMDTVREEDGLAMSSRNAYLSDEEREKAHVVYKSLCAAREVYESRLARGMEEVTADDLREVVRAVLETEPLITEVQYVAVDDLETMQPVERVGNDGCVISLACILGPVRLIDNIVL 264
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Match: A0A1Z5JY74_FISSO (Pantoate--beta-alanine ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JY74_FISSO) HSP 1 Score: 218 bits (554), Expect = 2.670e-67 Identity = 118/223 (52.91%), Postives = 162/223 (72.65%), Query Frame = 1
Query: 1 QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDCAYFGQKDALQCILVKRLVEDLNFPVEVVVSDTRREVDGLAMSSRNTYMSHDERAAAPVVFRALEAAAETRQRAAAAGRRATRQELITAAEVVLAAQPLVTSVDYLSVGSPLTMEELQEVG-EAGAVVSVALRLGTVRLIDNIVL 666
+D + YPRQLQ D + LA+ G VD +FAPS +MY H YVDP GFDD EG +RPG FRGVAT+VTKL N+VQP AYFGQKDA QC+L++R+V+DLN V V+V+DT RE DGLAMSSRNTY++ ER AAP+V+++L AA + +A A +E + E VL ++PL++ + Y+S+ + TM+ L++V E GA++S+A +LG+VRLIDNI++
Sbjct: 70 EDFEKYPRQLQIDSDKLAALG-VDYLFAPSVNDMYGKDHVTYVDPEGFDDTSEGKSRPGHFRGVATIVTKLFNIVQPTNAYFGQKDAAQCVLIRRIVDDLNMDVNVIVADTVRESDGLAMSSRNTYLTPTERRAAPIVYQSLCAARTLVLASESAVESAVVRETV---ESVLRSEPLISEIQYVSIDNKSTMQSLEQVNREDGALISLACKLGSVRLIDNIII 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18053.4358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18053.4358.1 >prot_H-paniculata_contig18053.4358.1 ID=prot_H-paniculata_contig18053.4358.1|Name=mRNA_H-paniculata_contig18053.4358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp QDLDSYPRQLQGDLELLASEGLVDLVFAPSRGEMYSASHRIYVDPVGFDDback to top mRNA from alignment at H-paniculata_contig18053:158..3961+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18053.4358.1 ID=mRNA_H-paniculata_contig18053.4358.1|Name=mRNA_H-paniculata_contig18053.4358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3804bp|location=Sequence derived from alignment at H-paniculata_contig18053:158..3961+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18053:158..3961+ >mRNA_H-paniculata_contig18053.4358.1 ID=mRNA_H-paniculata_contig18053.4358.1|Name=mRNA_H-paniculata_contig18053.4358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig18053:158..3961+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |