mRNA_H-paniculata_contig17768.4243.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A6H5KUL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL2_9PHAE) HSP 1 Score: 322 bits (824), Expect = 2.690e-102 Identity = 176/255 (69.02%), Postives = 200/255 (78.43%), Query Frame = 1
Query: 1 QVKPTLDDKVSLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGR---VMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQDSLPKPK------------KKGKPSEPTAALTA-SDISAAKYLIGAPSDVSL 717
+V PTLDDK SL+IVMCVVFLGDTARGIFFPTLW YV++MGGDRITLGY VGAFS GR VMISPYFG LSTKHGYR VLM ASG+I GA+AY LA A+LI AQI++GVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPF+GGFLSF++ +RI ++G ++VL FTAPA+VM +A +L LL VF+DS+PK K KK P T A A S SAAKYL+GAPS+VSL
Sbjct: 160 KVSPTLDDKASLVIVMCVVFLGDTARGIFFPTLWKYVQAMGGDRITLGYSVGAFSFGRQVAVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYALAWTTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLSFLIKDRRIPLLGEFLVLTSFTAPAYVMVVAALLLFTLLKLVFEDSIPKGKSTKTSKQVKASTKKSTPLVKTEAEIAYSSGSAAKYLMGAPSEVSL 414
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: D8LGE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE0_ECTSI) HSP 1 Score: 303 bits (776), Expect = 6.050e-97 Identity = 166/240 (69.17%), Postives = 187/240 (77.92%), Query Frame = 1
Query: 46 MCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGR---VMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQDSLPKPK------------KKGKPSEPTAALTA-SDISAAKYLIGAPSDVSL 717
MCVVFLGDTARGIFFPTLW YV++MGGDRITLGY VGAFSLGR VMISPYFG LSTKHGYR VLM ASG+I GA+AY LA A+LI AQI++GVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPF+GGFLSF++ +RI ++G ++VL FTAPA+VM +A +L LL VF+DS+P K KK P T A A S SAAKYL+GAPSDVSL
Sbjct: 1 MCVVFLGDTARGIFFPTLWKYVQAMGGDRITLGYSVGAFSLGRQVAVMISPYFGGLSTKHGYRKVLMVASGVIALGALAYALAWTTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLSFLIKDRRIPLLGEFLVLTSFTAPAYVMIVAALVLFALLKLVFEDSIPNGKPTKTSKQVKVSTKKSTPLVKTEAEMAYSSGSAAKYLMGAPSDVSL 240
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: D8LI50_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI50_ECTSI) HSP 1 Score: 254 bits (648), Expect = 5.390e-77 Identity = 133/239 (55.65%), Postives = 174/239 (72.80%), Query Frame = 1
Query: 1 QVKPTLDDKVSLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQDSLPKPKKKGKPSEPTAALTASDISAAKYLIGAPSDVSL 717
+V+PTLDDK S +V+ V L DTARGIFFPTLWT+V +GGD+I LGYCVGAFSLGR ++SP FGR+ST+HGYR L+ ++ ++ G + Y +AD+ ++ +Q+ LGVGSGTLGVTR YVADK+T EQRTYLLAYTTAVQYAGFT MP LGGF S++L I ++G +++L QFTAPAF +AA + +L LL+ VFQD + + KP++ T S+AK L G S V+L
Sbjct: 84 EVRPTLDDKASFAVVLGDVLLVDTARGIFFPTLWTHVSQLGGDKIALGYCVGAFSLGRTLMSPVFGRMSTEHGYRRALLISTALVSFGTLFYAVADSVFTVFLSQVFLGVGSGTLGVTRGYVADKTTKEQRTYLLAYTTAVQYAGFTVMPSLGGFFSYLLGSTEIPLLGRFLMLTQFTAPAFFVAAMSTVLFLLLWFVFQDGIEQ-----KPAKTT--------SSAKELSGTASGVTL 309
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: D7FUX3_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX3_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.760e-68 Identity = 117/214 (54.67%), Postives = 156/214 (72.90%), Query Frame = 1
Query: 31 SLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQDSLPKPKKKGKPSEPTAALTASDI 672
S IV+ + L DTARGIFFPTLWT+V +GGD+I LGYCVGAFSLGR ++SP FGR+ST+HGYR + ++ +I ++ Y +AD+ ++ +Q+ LG+GSGTLGVTRAYVADK+T EQRTYLLAYTT+VQYAG T MP LGGF S++L I ++G +++L QFTAPAF +AA + +L LL+ VFQD + + K S + TAS +
Sbjct: 14 SRSIVLGNLLLIDTARGIFFPTLWTHVIQLGGDKIALGYCVGAFSLGRTLLSPVFGRMSTEHGYRRAFLISTVLIPFASLFYAVADSVLTVFLSQLFLGMGSGTLGVTRAYVADKTTKEQRTYLLAYTTSVQYAGLTVMPILGGFFSYLLGSTEIPLLGRFLLLTQFTAPAFFVAAMSTVLFLLLWSVFQDGIEQKPAKTSSSGKELSGTASGV 227
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A7S3UZ09_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ09_HETAK) HSP 1 Score: 197 bits (500), Expect = 7.470e-57 Identity = 106/219 (48.40%), Postives = 144/219 (65.75%), Query Frame = 1
Query: 22 DKVSLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQDSLPKPKKK--GKPSEPTAALTASDI 672
D VS +++ VVF+GDTARG+ FPTLW V +GG +T G+ V AFS GRV+ SP+FG++ST +GY+ VL A+ ++ G Y A N LIA Q+++G+GSGTLGVTRAYVAD ST RT L+AY TA+QY GFT P +GG LS++L + + ++ + L Q+TAPA +MAA A + LL G F+D +P + PS P AL AS +
Sbjct: 45 DWVSFLVIGFVVFIGDTARGLMFPTLWPLVSKLGGTELTQGFTVAAFSFGRVLSSPHFGKMSTDYGYKKVLTFAACVMIAGCFLYATAQNCYWLIAGQVVIGLGSGTLGVTRAYVADNSTKRSRTVLMAYLTALQYGGFTVTPCVGGLLSYLLGDRELSLLPG-LSLTQYTAPALLMAALALVAIALLAGPFRDYVPAERAALARPPSRP--ALPASSV 260
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A7R9U9D1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D1_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.450e-51 Identity = 97/195 (49.74%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 31 SLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMI----VGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQD 603
S ++ VV LGD+ARG+ FPTLW V+S+GGDR T G+ VGAFSLGR + SP+ GR S + G++ L S II G + Y A + +SL+ AQIL+GVGSG+LGVTRAYVA+ S+P RT LLAY TAVQY GFTC PF+G L+ + G +++ G V+++F AP F+ A A + + LL VF +
Sbjct: 93 SAAVICAVVLLGDSARGVMFPTLWPLVESLGGDRSTNGFMVGAFSLGRAISSPFIGRASVRMGFQRTLSLCSLIICLGGLLYGTATSISSLLVAQILIGVGSGSLGVTRAYVAELSSPSTRTVLLAYLTAVQYCGFTCTPFIGALLT-QIFGDGVLLGRDRAGHEWVVDKFNAPGFLTAIWAMVNAVLLLVVFAE 286
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A7S1XVC4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVC4_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.350e-50 Identity = 95/191 (49.74%), Postives = 125/191 (65.45%), Query Frame = 1
Query: 31 SLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQD 603
S +I+ VV LGD+ARGI FPTLW V+S+GGDR GY VG+FS GR + SP GR S KHGY++ L S +I G Y A N LIA QIL+G+GSG+LGVTRAYVA+ S+P RT LLAY TAVQY GFTC PF+G L+++ G + + V +++F AP + + A + LL+ F++
Sbjct: 119 SALIICLVVLLGDSARGIMFPTLWPLVQSLGGDRTVHGYTVGSFSFGRALASPCIGRWSGKHGYKATLGICSLVICLGGFVYATARNLPMLIAGQILIGIGSGSLGVTRAYVAELSSPASRTVLLAYLTAVQYCGFTCTPFIGAILTYIFGGGYT--IANLVEVDKFNAPGYFTSLWAISNAILLFVAFRE 307
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A836C8M5_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M5_9STRA) HSP 1 Score: 175 bits (443), Expect = 4.770e-48 Identity = 100/210 (47.62%), Postives = 134/210 (63.81%), Query Frame = 1
Query: 16 LDDKVSLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVL------HGKRIMIVGSWVVL--NQFTAPAFVMAASAAILSGLLYGVFQDSLPKPK 621
L D SL ++ VV +GDTARGI FPTL +YV MGG++ TLG V FSLGRV+ SP G+ ST++G R VL A + GAI Y LA + A LIAAQ+++G+GSGTLGVTR YVAD++ +RT +LA TAVQY GF C P LG L + G + G WV L +QFTAP +++A ++A ++ L++ +D+ P K
Sbjct: 50 LADYKSLATILTVVLIGDTARGIVFPTLSSYVILMGGNKSTLGAAVAGFSLGRVIASPLLGKWSTQYGCRRVLAAALSALSLGAILYALASSTAWLIAAQVMMGLGSGTLGVTRGYVADRTPNARRTGMLAMLTAVQYGGFACTPLLGAMLCRAIGDGAWGFGHHFAL-GGWVRLEWSQFTAPGYLLAGASAAVALLVWLCLEDAAPAAK 258
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A7S2V0P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0P8_9STRA) HSP 1 Score: 172 bits (435), Expect = 7.520e-47 Identity = 99/214 (46.26%), Postives = 133/214 (62.15%), Query Frame = 1
Query: 7 KPTLDDKVSLMIVMCV----VFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNASLIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFLSFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYG-VFQDSLPKPKKKGK 633
+PT D + M CV V +GD ARG+ FPTLW V+S+GGDR T GYCV AFS GR+ SPYFG+LST+ GY+ VL+ A I G + Y A + L+ Q ++G G+GTLGVTRAYVAD ++ QRT +AY TA+QYAGFT P LG + +L G G + V ++F+APA+ AA+L GLL F + +P +++ K
Sbjct: 55 EPTKDGGIKNMKSFCVIAYMVLVGDAARGLMFPTLWPLVESLGGDRSTQGYCVAAFSFGRIFASPYFGQLSTEKGYKDVLLIAIAITVVGCLTYAHATSTWLLMVGQCVMGFGAGTLGVTRAYVADNTSSAQRTTYIAYITALQYAGFTVCPSLGAAFTLLL-GDDTYSWGPFQV-SKFSAPAY-FHIGAALLGGLLLQFAFDNYIPTARQRAK 265
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Match: A0A7S1ZB43_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB43_TRICV) HSP 1 Score: 167 bits (424), Expect = 4.170e-45 Identity = 96/199 (48.24%), Postives = 119/199 (59.80%), Query Frame = 1
Query: 16 LDDKVSLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCVGAFSLGRVMISPYFGRLSTKHGYRSVLMGASGIIFCGAIAYVLADNNAS---LIAAQILLGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFLGGFL-SFVLHGKRIMIVGSWVVLNQFTAPAFVMAASAAILSGLLYGVFQ 600
+ DK IV V+ +GD +RG+FFPT+W V+ +GGD +TLGY V AFS GR+M SP FG S HGY L+ + I+ G + Y N A LI Q +LGVGSGTLGVTRA+VAD + RT +A+ TAVQYAGFT PF G F + G R + G + VLN FTAPA+ MA I LL FQ
Sbjct: 136 ISDKTGFFIVCLVILIGDMSRGVFFPTMWPLVQHVGGDTVTLGYSVAAFSFGRIMSSPLFGSWSVTHGYTKTLILSVSILAMGTLLYSQVYNVAKPEFLIFGQTILGVGSGTLGVTRAFVADVTPNRNRTTYMAWLTAVQYAGFTVTPFFGAFFYKIFMDGDRELRSGIF-VLNGFTAPAYFMALICFITLILLVTKFQ 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17768.4243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17768.4243.1 >prot_H-paniculata_contig17768.4243.1 ID=prot_H-paniculata_contig17768.4243.1|Name=mRNA_H-paniculata_contig17768.4243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp QVKPTLDDKVSLMIVMCVVFLGDTARGIFFPTLWTYVKSMGGDRITLGYCback to top mRNA from alignment at H-paniculata_contig17768:2903..4785+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17768.4243.1 ID=mRNA_H-paniculata_contig17768.4243.1|Name=mRNA_H-paniculata_contig17768.4243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1883bp|location=Sequence derived from alignment at H-paniculata_contig17768:2903..4785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17768:2903..4785+ >mRNA_H-paniculata_contig17768.4243.1 ID=mRNA_H-paniculata_contig17768.4243.1|Name=mRNA_H-paniculata_contig17768.4243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig17768:2903..4785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |