prot_H-paniculata_contig17688.4215.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17688.4215.1
Unique Nameprot_H-paniculata_contig17688.4215.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A2I0JPZ3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JPZ3_PUNGR)

HSP 1 Score: 55.5 bits (132), Expect = 1.510e-7
Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    3 LYKRKTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSVVAIQD 58
            ++KRK G DGKVE YK RLVA GNRQ + ++++E   P     S +IML++ A  D
Sbjct:  145 VFKRKIGADGKVETYKARLVAKGNRQRQEVNYKETFSPVAMLKSIRIMLAITAHYD 200          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.460e-7
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT +DGK+EK+K RLVA G  QI ++D+   S P P++AS K+ML+V
Sbjct:   54 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAV 100          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5JSU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU1_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.480e-7
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT +DGK+EK+K RLVA G  QI ++D+   S P P++AS K+ML+V
Sbjct:  361 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAV 407          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.490e-7
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT +DGK+EK+K RLVA G  QI ++D+   S P P++AS K+ML+V
Sbjct: 1443 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAV 1489          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5KUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV5_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.400e-7
Identity = 24/47 (51.06%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT ++GK++K+K RLVA G  QI ++D+   S P P++ASTK+ML+V
Sbjct:  750 KTNKEGKIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASTKLMLAV 796          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5KFJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ3_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 8.110e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT +DGK+EK+K RLVA G  +I ++D+   S P P++AS K+ML+V
Sbjct:  172 KTNKDGKIEKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAV 218          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5KU29_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU29_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 8.580e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT ++GK+EK+K RLVA G  QI ++D+   S P P++AS K+ML+V
Sbjct:  172 KTNKEGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAV 218          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A8J5YZ71_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YZ71_9ROSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.250e-6
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    3 LYKRKTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSVVA 55
            +YK KT ++GKVEKYK RLVA G +QI  +D+ E  FP     + ++++++ A
Sbjct:  157 VYKTKTNKEGKVEKYKARLVAKGYKQIYGVDYDEVFFPVARIDTIRLLMAIAA 209          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5KVP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.190e-6
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    7 KTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            KT ++GK++K+K RLVA G  QI ++D+   S P P++AS K+ML+V
Sbjct:  132 KTNKEGKIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAV 178          
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.210e-6
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    4 YKRKTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIMLSV 53
            Y  KT ++GKV+K+K RL+A G  QI ++D+   S P P++AS K+ML+V
Sbjct:  350 YSWKTNKEGKVDKFKARLLARGFSQIPNVDYFHSSSPCPSSASIKLMLAV 399          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17688.4215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I0JPZ3_PUNGR1.510e-748.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE2.460e-753.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSU1_9PHAE2.480e-753.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LGF7_9PHAE2.490e-753.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUV5_9PHAE3.400e-751.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFJ3_9PHAE8.110e-751.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KU29_9PHAE8.580e-751.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5YZ71_9ROSI1.250e-643.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KVP5_9PHAE2.190e-648.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K164_9PHAE2.210e-648.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17688contigH-paniculata_contig17688:2613..2786 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17688.4215.1mRNA_H-paniculata_contig17688.4215.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17688 2590..2786 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17688.4215.1 ID=prot_H-paniculata_contig17688.4215.1|Name=mRNA_H-paniculata_contig17688.4215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MMLYKRKTGEDGKVEKYKCRLVANGNRQIKSIDFQEGSFPTPAAASTKIM
LSVVAIQD
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