prot_H-paniculata_contig17560.4172.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A8F0FD95_9PHAE (Cytochrome c oxidase subunit 1 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FD95_9PHAE) HSP 1 Score: 104 bits (259), Expect = 9.070e-25 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLGNNQLYN 52
RWLFSTNHKDIGTAYI+FGGVSGI+GTGMS+ IRIQLMSPGN FLGNNQLYN
Sbjct: 18 RWLFSTNHKDIGTAYIIFGGVSGIIGTGMSIFIRIQLMSPGNTFLGNNQLYN 69
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A8D5NJG3_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=Chordariaceae TaxID=66220 RepID=A0A8D5NJG3_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 5.920e-21 Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLG-NNQLYN 52
RWLFSTNHKDIGT Y++FGG SG++GT MS+LIR+QL SPGN FLG N+QLYN
Sbjct: 30 RWLFSTNHKDIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYN 82
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A8F0K0Q8_9PHAE (Cytochrome c oxidase subunit 1 n=5 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0Q8_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.640e-19 Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLG-NNQLYN 52
RWLFSTNHKDIGT Y++FGG SG++GT MS+++R+QLMSPGN FLG N+QLYN
Sbjct: 29 RWLFSTNHKDIGTLYLIFGGFSGVLGTAMSVIVRLQLMSPGNQFLGGNHQLYN 81
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 9.260e-19 Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLG-NNQLYN 52
RWLFSTNHKDIGT Y++FGG SG++GT MS+LIR+QL SPGN FLG N+QLYN
Sbjct: 30 RWLFSTNHKDIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYN 82
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A0S2I710_SACJA (Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina japonica TaxID=88149 RepID=A0A0S2I710_SACJA) HSP 1 Score: 87.4 bits (215), Expect = 9.290e-19 Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLG-NNQLYN 52
RWLFSTNHKDIGT Y++FGG SG++GT MS+LIR+QL SPGN FLG N+QLYN
Sbjct: 29 RWLFSTNHKDIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYN 81
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A2Z5XCH3_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=16 Tax=Chordariaceae TaxID=66220 RepID=A0A2Z5XCH3_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.060e-18 Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLG-NNQLYN 52
RWLFSTNHKDIG+ Y++FGG SG++GT MS+LIR+QL SPGN FLG N+QLYN
Sbjct: 30 RWLFSTNHKDIGSLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYN 82
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: Q2TUB0_DICDH (Cytochrome c oxidase subunit 1 n=32 Tax=Phaeophyceae TaxID=2870 RepID=Q2TUB0_DICDH) HSP 1 Score: 86.3 bits (212), Expect = 2.330e-18 Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLGNN-QLYN 52
RWLFSTNHKDIGT Y++FGG SG++GTGMS+LIR+QL SP N FL NN QLYN
Sbjct: 28 RWLFSTNHKDIGTLYLLFGGFSGVLGTGMSVLIRLQLASPSNQFLSNNHQLYN 80
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A5K7TLP3_9PHAE (Cytochrome c oxidase subunit 1 n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A5K7TLP3_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.420e-18 Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFLG-NNQLYN 52
RWLFSTNHKDIGT Y++FGG SG++GT MS+LIR+QL SPGN FLG N+QLYN
Sbjct: 34 RWLFSTNHKDIGTLYLIFGGFSGVLGTTMSVLIRLQLASPGNDFLGGNHQLYN 86
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: A0A7S1BPC9_9STRA (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPC9_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.160e-18 Identity = 36/53 (67.92%), Postives = 45/53 (84.91%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFL-GNNQLYN 52
RWLFSTNHKDIGT Y++FG SG+ GT +S+LIR++LM PGN+ L GN+QLYN
Sbjct: 6 RWLFSTNHKDIGTLYLIFGAFSGVAGTTLSVLIRMELMQPGNLILSGNHQLYN 58
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Match: K9ZWM2_9STRA (Cytochrome c oxidase subunit 1 n=17 Tax=Ochrophyta TaxID=2696291 RepID=K9ZWM2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.350e-18 Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0
Query: 1 RWLFSTNHKDIGTAYIVFGGVSGIVGTGMSMLIRIQLMSPGNVFL-GNNQLYN 52
RWLFSTNHKDIGT Y++FGGV+GI GT +S+LIR++L PGN FL GNNQLYN
Sbjct: 20 RWLFSTNHKDIGTLYLIFGGVAGIAGTTLSVLIRLELAQPGNQFLSGNNQLYN 72 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17560.4172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig17560.4172.1 ID=prot_H-paniculata_contig17560.4172.1|Name=mRNA_H-paniculata_contig17560.4172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bpback to top |