mRNA_H-paniculata_contig17483.4136.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177VID9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VID9_9BASI) HSP 1 Score: 112 bits (281), Expect = 2.920e-26 Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGGY*DR*VSGARGACHCLRTISQLSISVRDLVHTP 462
++ GTRPD+A+A+ DP+ E KR+ RY+ +TFGG D EG+VDADWA +DR+S +G++F + GGA+ W SRKQ V LS+ E EY+A G AG+ +L G V+ AR C+ TI+ + + LV P
Sbjct: 123 LAQGTRPDLAFAVSTLGKFSSDPTEEHMIAAKRVLRYIRGTSGAKLTFGGSKGEDEVEGYVDADWAADRDDRRSMSGFVFTMAGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREVLLLSGA----VAAARKELGCI-TINCDNQAAIQLVKNP 271
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177UJU6_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia walkeri TaxID=117179 RepID=A0A177UJU6_9BASI) HSP 1 Score: 115 bits (287), Expect = 3.930e-26 Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
++ GTRPD+A+A+ DP+ E KR+ RY+ +TFGG + +G EG+VDADWA +DR+ST+G+++ + GGA+ W SRKQ V LS+ E EY+A G AG+ +L G
Sbjct: 494 LAQGTRPDLAFAVSTLGKFSSDPTEEHMEAAKRVLRYIRGTAGAKLTFGGDRSEEGVEGYVDADWAADRDDRRSTSGFVYTMAGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALLLSG 614
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177UUN7_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177UUN7_9BASI) HSP 1 Score: 115 bits (287), Expect = 4.460e-26 Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
++ GTRPD+A+A+ DP+ E KR+ RY+ +TFGG + +G EG+VDADWA +DR+ST+G+++ + GGA+ W SRKQ V LS+ E EY+A G AG+ +L G
Sbjct: 1299 LAQGTRPDLAFAVSTLGKFSSDPTEEHMEAAKRVLRYIRGTTGAKLTFGGDRSEEGVEGYVDADWAADRDDRRSTSGFVYTMAGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALLLSG 1419
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177T2L8_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia caries TaxID=13290 RepID=A0A177T2L8_9BASI) HSP 1 Score: 114 bits (285), Expect = 4.640e-26 Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
++ GTRPD+A+A+ DP+ E KR+ RY+ +TFGG + + EG+VDADWA +DR+ST+G+++ + GGA+ W SRKQ V LS+ E EY+A G AG+ +LGG
Sbjct: 300 LAQGTRPDLAFAVSTLGKFSSDPTEEHMEAAKRVLRYIRGTAGAKLTFGGDRSEEEVEGYVDADWAADRDDRRSTSGFVYTMAGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALLLGG 420
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A8B9AF53_PHODC (secreted RxLR effector protein 161-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AF53_PHODC) HSP 1 Score: 106 bits (264), Expect = 2.400e-25 Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 13 TRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
TRPD+A+A+ S M +P R+ + K IFRYL + D GI F Q + G+VDAD+A ++DR+STTGY+F L GG + W S Q LV LS+TE EY+A EA K L G
Sbjct: 51 TRPDLAHAVSAVSKFMANPGRQHWDAVKWIFRYLRSTTDHGIMFVRQQDDPSVVGYVDADYAGDLDDRRSTTGYVFTLAGGPISWRSMVQSLVALSTTESEYMAVAEAAKEALWLTG 167
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177U9M6_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177U9M6_9BASI) HSP 1 Score: 112 bits (279), Expect = 4.830e-25 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
++ GTRPD+A+A+ DP+ E KR+ RY+ +TFGG + + EG+VDADWA +DR+ST+G+++ + GGA+ W SRKQ V LS+ E EY+A G AG+ +L G
Sbjct: 620 LAQGTRPDLAFAVSTLGKFSSDPTEEHMEAAKRVLRYIRGTAGAKLTFGGDRSEEEVEGYVDADWAADRDDRRSTSGFVYTMAGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALLLSG 740
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177T2R9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T2R9_9BASI) HSP 1 Score: 108 bits (270), Expect = 5.410e-25 Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGG-EGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
++ GTRPD+AYA+ DP+ R+ RYL +TFGGQ +G+ GFVD+DWA +DR+ST+G++F + GGA+ W SRKQ V LS+ E EY+A G AG+ +L G
Sbjct: 113 LAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGATLTFGGQKDGNVSLAGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALMLSG 234
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A177VUP4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VUP4_9BASI) HSP 1 Score: 110 bits (275), Expect = 5.580e-25 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 VSTGTRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGG-EGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
++ GTRPD+AYA+ DP+ R+ RYL +TFGGQ +G+ EGFVD+DWA +DR+ST+G++F + GGA+ W SRKQ V LS+ E EY+A G AG+ +L G
Sbjct: 214 LAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGRESLMLSG 335
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A2N9GS71_FAGSY (Uncharacterized protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GS71_FAGSY) HSP 1 Score: 107 bits (267), Expect = 8.540e-25 Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 13 TRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
TRPD+A+A+ S M +P RE ++ K IFRYL + GI F Q + G+VDAD+A +V+DR+STTGY+F L+GG + W S Q +V +S+TE EY+A EA K L G
Sbjct: 79 TRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKG 195
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Match: A0A2N9F5E5_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F5E5_FAGSY) HSP 1 Score: 110 bits (276), Expect = 1.320e-24 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 13 TRPDIAYAIRQASGCMEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVEDRKSTTGYIFKLNGGAMRWCSRKQQLVTLSSTEVEYIAEGEAGKRRYILGG 363
TRPD+A+A+ S CM +P RE ++ K IFRYL + GI F Q + G+VDAD+A +V+DR+STTGY+F L+GG + W S Q +V +S+TE EY+A EA K L G
Sbjct: 952 TRPDLAHAMSTVSRCMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKG 1068 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17483.4136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17483.4136.1 >prot_H-paniculata_contig17483.4136.1 ID=prot_H-paniculata_contig17483.4136.1|Name=mRNA_H-paniculata_contig17483.4136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp MEDPSREDFSTCKRIFRYLGTMPDFGITFGGQSNGDGGEGFVDADWADKVback to top mRNA from alignment at H-paniculata_contig17483:3564..4171+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17483.4136.1 ID=mRNA_H-paniculata_contig17483.4136.1|Name=mRNA_H-paniculata_contig17483.4136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=608bp|location=Sequence derived from alignment at H-paniculata_contig17483:3564..4171+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17483:3564..4171+ >mRNA_H-paniculata_contig17483.4136.1 ID=mRNA_H-paniculata_contig17483.4136.1|Name=mRNA_H-paniculata_contig17483.4136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig17483:3564..4171+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |