mRNA_H-paniculata_contig17385.4099.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: D7FPY9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.990e-36 Identity = 67/83 (80.72%), Postives = 77/83 (92.77%), Query Frame = -2
Query: 143 ETVKDLSVIGSEHFPLRSVLVDNQPRSVLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPGVTDGAVGG 391
E+VKDL V+GSEHFPLR+VLVDNQPR+V+QQANVLP++SWFP+D++DRQLLDLLPVLLALTSCQDVRSVL LRPGV G GG
Sbjct: 439 ESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGVGGGGG 521
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: A0A6H5JWM9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE) HSP 1 Score: 137 bits (346), Expect = 4.110e-35 Identity = 66/82 (80.49%), Postives = 76/82 (92.68%), Query Frame = -2
Query: 146 ETVKDLSVIGSEHFPLRSVLVDNQPRSVLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPGVTDGAVG 391
E+VKDL V+GSEHFPLR+VLVDNQPR+V+QQANVLP++SWFP+D++DRQLLDLLPVLLALTSCQDVRSVL LRPGV G G
Sbjct: 735 ESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGVGGGG 816
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: C4Y807_CLAL4 (FCP1 homology domain-containing protein n=2 Tax=Clavispora lusitaniae TaxID=36911 RepID=C4Y807_CLAL4) HSP 1 Score: 57.8 bits (138), Expect = 3.710e-7 Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = -2
Query: 167 GLETVKDLSVIGSEHFPLRSVLV-DNQPRS-VLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPG 397
G+ +KDLS S+ L++V++ DN P S + N + I W D DR LL+LLP+L AL+ C DVR +LGLR G
Sbjct: 269 GVGYIKDLSKFFSKDDDLKNVIILDNSPVSYAFHENNAVMIEGWI-NDQSDRDLLNLLPMLTALSLCIDVRFILGLRSG 346
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: M2VTB3_GALSU (CTD small phosphatase like isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTB3_GALSU) HSP 1 Score: 57.4 bits (137), Expect = 5.560e-7 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = -2
Query: 173 VKDLSVIGSEHFPLRSVLVDNQPRSV-LQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 385
+KDL V+G + + V++DN P++ LQ N +PI +W DS+DR+LLDLLP L L++C+DVR L R
Sbjct: 387 LKDLRVLGRDLS--KCVILDNSPQAFGLQVENGIPITTWVD-DSEDRELLDLLPFLKQLSNCEDVRPFLSKR 455
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: A0A1L0BKV1_9ASCO (CIC11C00000003019 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0BKV1_9ASCO) HSP 1 Score: 56.6 bits (135), Expect = 9.540e-7 Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = -2
Query: 167 GLETVKDLSVIGSEHFPLRSVLV-DNQPRS-VLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPG 397
G+ +KDLS ++ L++V++ DN P S LQ+ N + I W D DR LL+LLP+L +L+ C DVR ++GLR G
Sbjct: 277 GVGYIKDLSQFVAKEEDLKNVVILDNSPVSYALQEHNGVMIEGWI-NDQNDRDLLNLLPMLYSLSLCIDVRFIIGLRNG 354
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: A0A7S3G6I3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G6I3_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 1.070e-6 Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = -2
Query: 179 VKDLSVIGSEHFPLR-SVLVDNQPRS-VLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLG 385
VKDLS +G PL+ ++++DN P S +LQ N +PI SWF + DR+LLDL+PVL + + DV VLG
Sbjct: 202 VKDLSRLGR---PLKDTIILDNSPLSYMLQPENAVPISSWFDQPD-DRELLDLIPVLTTMATVPDVTEVLG 268
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: A0A8J4V4U0_9MYCE (FCP1 homology domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V4U0_9MYCE) HSP 1 Score: 55.5 bits (132), Expect = 2.160e-6 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = -2
Query: 182 VKDLSVIGSEHFPLRS-VLVDNQPRSVL-QQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVL 385
VKDLS +G + L+S ++VDN P S L N +PI SWF D D++LLDLLP+L LT DVR VL
Sbjct: 225 VKDLSRLGRD---LKSTIIVDNSPNSYLFHPENAIPIDSWFD-DKNDKELLDLLPLLDDLTKVDDVRLVL 290
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: CTDS_DICDI (Probable C-terminal domain small phosphatase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=CTDS_DICDI) HSP 1 Score: 54.7 bits (130), Expect = 4.110e-6 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = -2
Query: 182 VKDLSVIGSEHFPLRS-VLVDNQPRSVL-QQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVL 385
VKDLS +G + L+S ++VDN P S L N +PI SWF D DR+LLDLLP+L L +DVR VL
Sbjct: 235 VKDLSRLGRD---LKSTIIVDNSPSSYLFHPENAIPIDSWFD-DKDDRELLDLLPLLDDLIKVEDVRLVL 300
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: UPI001C806D8C (Nuclear envelope morphology protein 1 n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C806D8C) HSP 1 Score: 54.3 bits (129), Expect = 6.670e-6 Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = -2
Query: 167 GLETVKDLSVIGSEHFPLRSVLV-DNQPRS-VLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPG 397
G+ +KDLS + L+ V++ DN P S L + N + I W D DR LL+LLP+L +L+ C DVR +LGLR G
Sbjct: 441 GVGYIKDLSKFFPKDDELKHVVILDNSPVSYALHEDNAVMIEGWI-NDQDDRDLLNLLPMLHSLSVCIDVRFILGLRSG 518
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Match: I0YM63_COCSC (NLI interacting factor (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YM63_COCSC) HSP 1 Score: 52.8 bits (125), Expect = 1.010e-5 Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = -2
Query: 179 VKDLSVIGSEHFPLR-SVLVDNQPRS-VLQQANVLPIRSWFPKDSQDRQLLDLLPVLLALTSCQDVRSVLG 385
VKDL+ +G PL S++VDN P S V Q N LPI + F D DR+LLD+LPVL A+ DVR LG
Sbjct: 107 VKDLTCLGR---PLPDSIIVDNSPHSYVFQPDNALPIGT-FIDDPNDRELLDILPVLKAVEKVDDVRVTLG 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17385.4099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17385.4099.1 >prot_H-paniculata_contig17385.4099.1 ID=prot_H-paniculata_contig17385.4099.1|Name=mRNA_H-paniculata_contig17385.4099.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp MVSCQLSKAFNSEYYSHRALVVATAAAPAAAATLGVSIPPTAPSVTPGLSback to top mRNA from alignment at H-paniculata_contig17385:4048..4448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17385.4099.1 ID=mRNA_H-paniculata_contig17385.4099.1|Name=mRNA_H-paniculata_contig17385.4099.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=401bp|location=Sequence derived from alignment at H-paniculata_contig17385:4048..4448+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17385:4048..4448+ >mRNA_H-paniculata_contig17385.4099.1 ID=mRNA_H-paniculata_contig17385.4099.1|Name=mRNA_H-paniculata_contig17385.4099.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig17385:4048..4448+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |