prot_H-paniculata_contig17275.4050.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig17275.4050.1
Unique Name	prot_H-paniculata_contig17275.4050.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	91

Homology

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: D8LFR8_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFR8_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 3.400e-34
Identity = 59/89 (66.29%), Postives = 71/89 (79.78%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAVFPAKTKVMALYPGTTTFYPATISAPFIEGRNGETDMCVMQFQDDDLTPDGKIPDLTLPARFVRQRA 89
            RQFK++R++ILT PR  E SGA+FP  ++VM LYP TTTFYPATIS PF+EGR+G  D CVMQFQDDD TP+G +P   LPARFVR R+
Sbjct:  229 RQFKLRRSNILTLPRPEEASGAIFPVGSRVMTLYPQTTTFYPATISGPFVEGRDGRIDYCVMQFQDDDPTPEGVLPHWRLPARFVRYRS 317

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A835YH95_9STRA (SGF29 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH95_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.180e-9
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 0

Query:    3 FKVKRNDILTFPREGEVSGAVFPAKTKVMALYPGTTTFYPATISAP-----------FIEGRNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            + V R++++   REGE SG  FP  ++V+A+YP TT+FY A I+ P                 G  D+C++QF+DD+    G      +PAR+V
Sbjct:  252 YTVTRDNVMALAREGEASGDQFPLHSRVLAMYPNTTSFYKAQIAGPPQRRSAAXXXXXXXXXVGGGDLCLVQFEDDEDEVTGLARRHLVPARYV 345

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: UPI000A2B5326 (SAGA-associated factor 29-like n=2 Tax=Arachis TaxID=3817 RepID=UPI000A2B5326)

HSP 1 Score: 60.8 bits (146), Expect = 2.610e-9
Identity = 35/87 (40.23%), Postives = 53/87 (60.92%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  + SGA  FP  + V+A+YPGTT  Y AT+    + G R  +TD  V++F DD+   DG +P+ T+P   V
Sbjct:  106 RQYKLPMGNIIPFPKSNDPSGASDFPPGSHVLAVYPGTTALYKATV----VHGHRKRKTDDYVLEFDDDE--EDGSLPERTVPFHKV 186

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A445CUJ5_ARAHY (SGF29 C-terminal domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445CUJ5_ARAHY)

HSP 1 Score: 60.1 bits (144), Expect = 5.610e-9
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  + SGA  FP  + V+A+YPGTT  Y AT+    + G R  +TD  V++F DD+   DG +P  T+P   V
Sbjct:  113 RQYKLPMGNIIPFPKSNDPSGAPDFPPGSHVLAVYPGTTALYKATV----VHGHRKRKTDDYVLEFDDDE--EDGSLPQRTVPFHKV 193

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A445CUJ1_ARAHY (SGF29 C-terminal domain-containing protein n=6 Tax=Arachis TaxID=3817 RepID=A0A445CUJ1_ARAHY)

HSP 1 Score: 60.1 bits (144), Expect = 1.020e-8
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  + SGA  FP  + V+A+YPGTT  Y AT+    + G R  +TD  V++F DD+   DG +P  T+P   V
Sbjct:  173 RQYKLPMGNIIPFPKSNDPSGAPDFPPGSHVLAVYPGTTALYKATV----VHGHRKRKTDDYVLEFDDDE--EDGSLPQRTVPFHKV 253

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A834TCC6_9FABA (SAGA-associated factor 29-like protein A-like isoform X1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TCC6_9FABA)

HSP 1 Score: 58.9 bits (141), Expect = 2.690e-8
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+  ++I+ FP+  + S A  FP  T+V+A+YPGTT  Y AT+    + G R  +TD  +++F DD+   DG +P  T+P   V
Sbjct:  173 RQYKLPMSNIIPFPKRNDPSNAPDFPHGTEVLAVYPGTTALYKATV----VNGHRKRKTDDYLLEFDDDE--EDGSLPQRTVPFHKV 253

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A396GVS2_MEDTR (Putative SGF29 tudor-like domain-containing protein n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GVS2_MEDTR)

HSP 1 Score: 58.2 bits (139), Expect = 2.950e-8
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  + S A  FP    V+A+YPGTT  Y AT+    ++G R  +TD  V++F DD+   DG +P  T+P   V
Sbjct:  112 RQYKLPMGNIIPFPKSNDPSSAQDFPPGKHVLAVYPGTTALYKATV----VQGHRRRKTDDYVLEFDDDE--EDGSLPQRTVPFHTV 192

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A445GFF2_GLYSO (SAGA-associated factor 29-like A isoform A n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445GFF2_GLYSO)

HSP 1 Score: 58.5 bits (140), Expect = 3.750e-8
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  + S A+ FP    V+A+YPGTT  Y AT+    ++G R  +T+  V++F DD+   DG +P  T+P R V
Sbjct:  174 RQYKLPMANIIPFPKSNDPSSALDFPPGKHVLAVYPGTTALYKATV----VQGPRRRKTEDYVLEFDDDE--EDGSLPQRTVPFRKV 254

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A1J7HNP6_LUPAN (SGF29 C-terminal domain-containing protein n=6 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A1J7HNP6_LUPAN)

HSP 1 Score: 58.2 bits (139), Expect = 5.370e-8
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  ++S A  FP    V+A+YPGTT  Y AT+    + G R  +TD  V++F DD+   DG +P  T+P   V
Sbjct:  180 RQYKLPMGNIIPFPKSNDLSSAPDFPPGKHVLAVYPGTTALYKATV----VHGHRKRKTDDYVLEFDDDE--EDGSLPQRTVPFHKV 260

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BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Match: A0A072TXE2_MEDTR (SGF29 tudor-like domain protein n=17 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A072TXE2_MEDTR)

HSP 1 Score: 58.2 bits (139), Expect = 5.490e-8
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0

Query:    1 RQFKVKRNDILTFPREGEVSGAV-FPAKTKVMALYPGTTTFYPATISAPFIEG-RNGETDMCVMQFQDDDLTPDGKIPDLTLPARFV 85
            RQ+K+   +I+ FP+  + S A  FP    V+A+YPGTT  Y AT+    ++G R  +TD  V++F DD+   DG +P  T+P   V
Sbjct:  184 RQYKLPMGNIIPFPKSNDPSSAQDFPPGKHVLAVYPGTTALYKATV----VQGHRRRKTDDYVLEFDDDE--EDGSLPQRTVPFHTV 264

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig17275.4050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFR8_ECTSI	3.400e-34	66.29	SGF29 C-terminal domain-containing protein n=2 Tax...	[more]
A0A835YH95_9STRA	2.180e-9	35.11	SGF29 C-terminal domain-containing protein n=1 Tax...	[more]
UPI000A2B5326	2.610e-9	40.23	SAGA-associated factor 29-like n=2 Tax=Arachis Tax...	[more]
A0A445CUJ5_ARAHY	5.610e-9	40.23	SGF29 C-terminal domain-containing protein n=1 Tax...	[more]
A0A445CUJ1_ARAHY	1.020e-8	40.23	SGF29 C-terminal domain-containing protein n=6 Tax...	[more]
A0A834TCC6_9FABA	2.690e-8	39.08	SAGA-associated factor 29-like protein A-like isof...	[more]
A0A396GVS2_MEDTR	2.950e-8	39.08	Putative SGF29 tudor-like domain-containing protei...	[more]
A0A445GFF2_GLYSO	3.750e-8	39.08	SAGA-associated factor 29-like A isoform A n=1 Tax...	[more]
A0A1J7HNP6_LUPAN	5.370e-8	39.08	SGF29 C-terminal domain-containing protein n=6 Tax...	[more]
A0A072TXE2_MEDTR	5.490e-8	39.08	SGF29 tudor-like domain protein n=17 Tax=50 kb inv...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.30.30.140		coord: 16..89 e-value: 1.3E-11 score: 46.3
None	No IPR available	PANTHER	PTHR21539:SF0	SAGA-ASSOCIATED FACTOR 29	coord: 2..85
IPR010750	SGF29 tudor-like domain	PFAM	PF07039	DUF1325	coord: 2..70 e-value: 1.1E-13 score: 51.4
IPR010750	SGF29 tudor-like domain	PROSITE	PS51518	SGF29_C	coord: 1..90 score: 24.701
IPR037802	SAGA-associated factor 29	PANTHER	PTHR21539	UNCHARACTERIZED	coord: 2..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig17275	contig	H-paniculata_contig17275:3051..5246 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig17275.4050.1	mRNA_H-paniculata_contig17275.4050.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig17275 3051..5246 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig17275.4050.1 ID=prot_H-paniculata_contig17275.4050.1|Name=mRNA_H-paniculata_contig17275.4050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
RQFKVKRNDILTFPREGEVSGAVFPAKTKVMALYPGTTTFYPATISAPFI
EGRNGETDMCVMQFQDDDLTPDGKIPDLTLPARFVRQRAT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010750	SGF29_tudor-like_dom
IPR037802	SGF29