prot_H-paniculata_contig17248.4037.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17248.4037.1
Unique Nameprot_H-paniculata_contig17248.4037.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
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BLAST of mRNA_H-paniculata_contig17248.4037.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.150e-12
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:   24 PEDTTN-APVCIARKDTLEFHLRPYRVPMDTLWVKHSAVVGMVTRLLG 70
            PE+T +   VC  RKDTLEFHLRPYR+PMDTL VKHSAV+ +VT LLG
Sbjct:   19 PEETCSIGGVCPPRKDTLEFHLRPYRIPMDTLRVKHSAVLDLVTTLLG 66
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BLAST of mRNA_H-paniculata_contig17248.4037.1 vs. uniprot
Match: D7FMN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN6_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 1.220e-6
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:   31 PVCIARKDTLEFHLRPYRVPMDTLWVKHSAVVGMVTRLLG 70
            P  I  K TLEF LRPYR+P + L  KH AV+GM+T  LG
Sbjct:   19 PRAIKNKGTLEFALRPYRIPAEVLREKHEAVLGMITIFLG 58
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17248.4037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWC3_9PHAE2.150e-1270.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FMN6_ECTSI1.220e-657.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17248contigH-paniculata_contig17248:2276..3266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17248.4037.1mRNA_H-paniculata_contig17248.4037.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17248 1660..3266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17248.4037.1 ID=prot_H-paniculata_contig17248.4037.1|Name=mRNA_H-paniculata_contig17248.4037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
MTSTGTTCVREERSTRRTTGPCNPEDTTNAPVCIARKDTLEFHLRPYRVP
MDTLWVKHSAVVGMVTRLLGEPVVDLDV*
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