prot_H-paniculata_contig1724.4034.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1724.4034.1
Unique Name	prot_H-paniculata_contig1724.4034.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	137

Homology

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.040e-16
Identity = 51/144 (35.42%), Postives = 72/144 (50.00%), Query Frame = 0

Query:    1 IEKKSDSTAALLSYSAEYITPK-KQKIGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHGTTPALDHLQPF 135
            ++ KSD+ +A  S+ A          +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+   A+A       +   ++    DRLW EAM +AC+  N +  S+N  +  PYE WHG      H +P+
Sbjct:  668 LKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEA---SHARPY 808

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5KWE4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-16
Identity = 50/144 (34.72%), Postives = 71/144 (49.31%), Query Frame = 0

Query:    1 IEKKSDSTAALLSYSAEYITPK-KQKIGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHGTTPALDHLQPF 135
            ++ K D+ +A  S+ A          +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+   A+A       +   ++    DRLW EAM +AC+  N +  S+N  +  PYE WHG      H +P+
Sbjct:   16 LKSKPDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEA---SHARPY 156

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.510e-16
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   26 IGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            +  +  DNGG+F  GDF    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +M PYE W+G
Sbjct:  156 VEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 262

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.270e-16
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 0

Query:    1 IEKKSDSTAALLSYSAEY---ITPKKQKIGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            ++ +SD+  A  ++ A     I P   +I  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +M PYE W+G
Sbjct:  350 LKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 482

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 9.150e-16
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   26 IGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +M PYE W+G
Sbjct:   42 VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 148

[Close]

BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 9.350e-16
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   26 IGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +M PYE W+G
Sbjct:  309 VEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 415

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.240e-15
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   26 IGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +M PYE W+G
Sbjct:  254 VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYG 360

[Close]

BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.410e-15
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0

Query:    1 IEKKSDSTAALLSYSAEYITPKKQK-IGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            ++ KSD+  A  S+ A          +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +  PYE W+G
Sbjct:  762 LKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYG 894

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BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.430e-15
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0

Query:    1 IEKKSDSTAALLSYSAEYITPKKQK-IGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            ++ KSD+  A  S+ A          +  +  DNGGEF  G+F    NE  I  E TP Y+PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +  PYE W+G
Sbjct:  469 LKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYG 601

[Close]

BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.460e-15
Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 0

Query:    1 IEKKSDSTAALLSYSAEYITPK-KQKIGAIHVDNGGEF-KGDFHWKLNEFGITHEHTPPYTPQYNDCAGWRLGLLREKAVA-------MMQGLEQEGNDRLWGEAMRYACDLTNMSIASSNTGNMMPYEKWHG 124
            +  KSD+ +A  S+ A          +  +  DNGGEF  G+F    NE  I  E TP ++PQYN  A   LGL+ E A+A       +   ++    D+LW EAM +AC+  N +  S+N  +  PYE W+G
Sbjct:  366 LRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYG 498

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1724.4034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K2M6_9PHAE	1.040e-16	35.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KWE4_9PHAE	1.140e-16	34.72	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KVR5_9PHAE	4.510e-16	40.19	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JV76_9PHAE	6.270e-16	37.04	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KKK1_9PHAE	9.150e-16	40.19	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5JRL9_9PHAE	9.350e-16	40.19	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5L3Y0_9PHAE	1.240e-15	40.19	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JBA7_9PHAE	4.410e-15	36.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZH7_9PHAE	4.430e-15	36.09	Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JB16_9PHAE	4.460e-15	35.34	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..134 e-value: 4.8E-10 score: 41.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..126 score: 11.955
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 17..133

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1724	contig	H-paniculata_contig1724:21243..21653 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1724.4034.1	mRNA_H-paniculata_contig1724.4034.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1724 21243..21653 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1724.4034.1 ID=prot_H-paniculata_contig1724.4034.1|Name=mRNA_H-paniculata_contig1724.4034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
IEKKSDSTAALLSYSAEYITPKKQKIGAIHVDNGGEFKGDFHWKLNEFGI
THEHTPPYTPQYNDCAGWRLGLLREKAVAMMQGLEQEGNDRLWGEAMRYA
CDLTNMSIASSNTGNMMPYEKWHGTTPALDHLQPFGT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf