mRNA_H-paniculata_contig17220.4024.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17220.4024.1
Unique NamemRNA_H-paniculata_contig17220.4024.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A6H5KRU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 6.570e-111
Identity = 224/486 (46.09%), Postives = 280/486 (57.61%), Query Frame = 1
Query:  337 FAFCFNVPTPSLVANTVSGRAITARQVHRSSNQHASPSPRMAIAS-AAEGRRTTG-----------------------VSPIISRDVGGGVLATPPAGESAKAPRLDGKSPDFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVLVLKARPRPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYAWINLPAWVAGNSKNQP----VAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDA-NKVYDTLVGDDLMGTFETEPEVRADFLKALVVLDSVSSMDSSVGSEA----------------------IAEVASSEDEGDAAVAALKENRRVKEKKEGGWFGVQGPT-ECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIPGRGRNENDTPAPKRPPPRNGGS 1638
            +A+ F  P+ + +++  + R I  R+       H SPSPRM+  S AAEG   +                        + P I+R    G++A     +     R DGKSPDFEVNLG++ISTL+ DYPRIFF+ P+FD++TE+IEL DPTGVAF+G+ NYKRVFATLRFFRQ  M DA TTFRLTYDWSKQQVR+TW +VL LKAR RP+YVDGISAYH+NSDG A+RH+LETVVVNG  VEPPFAYAWINLPAWV+  +  +P     A+P P              A      T L      + +DA   ++D            T+ E+R D+++AL    +V  MD+   SE+                                               +   GGWFG +G    C+TSWDCTGGMVCCDF+L+KVCCSNG++QPKFG+LIPSLVPIPGRGRNEND P  KR PP  G S
Sbjct:   23 YAYLFPTPSGAGLSSVATSRNIEDRK-SSVCRLHGSPSPRMSTMSPAAEGTEASAPTQARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPSGAGAALPTPH-------------AVIGGAPTQLFEQQQGEAEDAVGAMFDAA---------RTDSELRGDYMQAL---STVLMMDTDGVSESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNAGGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNENDNP--KRIPPAGGTS 480          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: D8LJ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 3.150e-56
Identity = 134/346 (38.73%), Postives = 183/346 (52.89%), Query Frame = 1
Query:  598 DFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVLVLKARP---RPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYAWINLPAWVAGNSKNQPVAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDANKVYDTLVGDDLMGT---FETEPEVRADFLKALVVLDSVSSMDSSVGSEAIAEVASSEDEGDAAVAALKENRRVKEKK------EGGW-FGVQGPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIPGRGRNEND 1596
            +F  NLG++I TL+ DY  +  E  +F++YT D++L DP+GV   GL  YKR+F T RF R+ L+ D +T FRL+YD S+QQVR+TW   LVL A P   RPV++DG S Y ++++G   RH++ET++VNGTPV+PPFA AW+ LP+WV           P   S S  SS D +           +   N +  + +   ++  +  DL GT   F+    VRA  +                                                      +G W    +GP  C+TS+DCTGG VCCD ++VK+CCSNGV Q K GDLIPSL+PIPGRGR E D
Sbjct:   21 EFNTNLGKVIDTLREDYATMLDEPLNFEIYTPDLQLRDPSGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWH--LVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMISVSS-SSGDVWGG---------MDDFNRSGRRRSGGNFERRIPVDLSGTAMAFQGLAGVRAASITRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELD 354          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A6H5JCH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 8.480e-49
Identity = 154/476 (32.35%), Postives = 213/476 (44.75%), Query Frame = 1
Query:  484 RRTTGVSPIISRDVGGGVLATP-PAGE---SAKAPRLDGKSPDFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQ---------------------------------------VRLTWKMVLVLKARP---RPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYAWINLPAWVAGNSKNQPVAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDANKVYDTLVGDDLMGT---FETEPEVRADFL----KALVVLDSVSSMDSSVGSEA---------------------------------------------------IAEVASSEDEGDAAVAALKENRRVKEKKEGGW-FGVQGPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIPGRGRNEND 1596
            RRT G +   S+ V   V  +P PAGE     K  +   +  +F  NLG++I TL+ DYP +  E  +FD+YT D++L DP+GV   GL  YKR+F T RF R+ L+ D +T FRL+YD S+QQ                                       VR+TW   LVL A P   RPV++DG S Y ++++G   RH+LET++VNGTPV+PPFA AW+ LP+WV               S  V  +P   + + +  V  ++   + +  +   K ++  +  DL GT   F+   EVRA  +    K L+          +VG +A                                                                               +G W    +GP  C+TS+DCTGG VCCD ++VK+CCSNGV Q K GDLIPSL+PIPGRGR E D
Sbjct:   67 RRTCGAASQASQGVFPSVARSPMPAGEIYEGEKKEKEKREQAEFNTNLGKVIDTLREDYPTMLDEPLNFDIYTPDLQLRDPSGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWH--LVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWVTQGR-----------SGGVAGAPGMTSVSSSGGVRGEIDDFDRSGRRSGGK-FERRIPMDLSGTAMAFQGLAEVRAASITRRRKGLLA---------AVGFDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELD 519          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A836CIZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 6.020e-39
Identity = 113/330 (34.24%), Postives = 145/330 (43.94%), Query Frame = 1
Query:  589 KSPDFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVLVLKARP-RPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAY-AWINLPAWVAGNSKNQPVAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDANKVYDTLVGDDLMGTFETEPEVRADFLKALVVLDSVSSMDSSVGSEAIAEVASSEDEGDAAVAALKENRRVKEKKEGGWFGVQGPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIP 1572
            ++PDFE NLG++I TL+ DYP +  E   + +YT+DI + DP+GV FKG+G YKR+FATLRFFR   +   +T FR+TYDW++Q+VR+ W M L  KAR   PV+VD IS YH+N +G    H+LET++V            A + L  WV                          AAA A   A                                   +R D               SS G             GDA     K  R         W  V  P+ C+ SWDC   M CCDF L KVCC+ G+  P      P LVPIP
Sbjct:   36 RNPDFEPNLGKVIDTLRSDYPELLNEPLDYSIYTDDITVKDPSGVEFKGIGTYKRLFATLRFFRHTFVDTVDTRFRVTYDWARQRVRVNWHMALSFKARAGHPVFVDCISVYHINDEGFVSAHDLETIMVXXXXXXXXXXXXAMMGL--WVRSEK-------------------GVGAAAAATTTAMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAALRGD---------------SSGG-------------GDAGKDRSKAPRLA-------WPKVDLPSGCEDSWDCESPMTCCDFALFKVCCNQGMGSPVTE---PRLVPIP 306          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A7S4A516_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A516_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.270e-36
Identity = 103/351 (29.34%), Postives = 158/351 (45.01%), Query Frame = 1
Query:  598 DFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVLVLKARPRPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYAWINLPAWV-AGNSKNQPVAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDANKVYDTLVGDDLMGTFETEPEVRADFLKALVVLDSVSSMDSSVGSEAIAEVASSEDEGDAAVAALKENRRVKEKKEGGWFGVQGPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIPGRGRNENDTPAPKRPPPRNGGSSNG 1647
            +FE+NLGR I  L+ D P       S+D+Y ++++L DP+GV  +GL NYK+ F  +R FR+V++   + TF+L YDWSK+ +++TW      +   +  YVD  SA+H++  G  ++H ++ V V G P+ PP++  W+    +V AG    +P A+P                                                   +F  E    +D  +  +VL S  S               S+ E +A   + K+  R KEKK+        P +C+  WDC   M CCDF++ K+CC  G+  P F +  P LVPIP         P  + PP   GG   G
Sbjct:   79 EFELNLGRAIDALRSDVPAFADRELSWDIYADNVQLADPSGVQTRGLQNYKQFFGVIRMFRRVMIDKVDITFKLRYDWSKKIIKVTWYSKWYARGSSKAAYVDATSAFHLDEQGKIFKHVVDRVQVGGRPLSPPYSVGWLAFREYVLAGLDGPRPAAVP---------------------------------------------------SFGFE---ASDIGQDALVLMSAMSASXXXXXXXXXXXXXSDGESEAPPPSKKKAPRNKEKKQKRKL---LPGQCEGMWDCDSPMECCDFVMFKMCCRGGLGIPAFLEPAPVLVPIP--------VPVERGPPGMPGGRGGG 364          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A0M0JBU2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBU2_9EUKA)

HSP 1 Score: 128 bits (322), Expect = 3.420e-28
Identity = 110/344 (31.98%), Postives = 151/344 (43.90%), Query Frame = 1
Query:  601 FEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVL-----------VLKARPRPVYVDGISAYHVNSDGNAYRHELETVVVNGT-PVEPPFAYAWINLPAWVAGNSKNQPVAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDANKVYDTLVGDDLMGTFETEPEVRADFLKALVVLDSVSSMDSSVGSEAIAEVASSEDEGDAAVAA-LKENRRVKEKKEGG--WFGVQGPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKF-----GDLIPSLVPIP 1572
            F++N GR I  L+ DYPR+F E P   ++T++IEL DP+G    G   Y+RVF  LRF R+  M+DA    RL  D   + +R+ W   L           ++   P  V++DG+S Y ++ DG   +H LE +V+ G  P+  P   A+    AW A        A+P            FF                LAD         T  G    GT  TE E   D  +A     +     S+   E   E A+ E   DAA    L++ R  K   + G   FG+ GP  C+TS+DC   MVCCD L   VCC+ G+  P       G L    +PIP
Sbjct:   79 FKLNQGRAIDVLRHDYPRLFTERPDMSIFTDNIELHDPSGKRLAGKKQYERVFDALRFLRRTTMQDAQVGIRLVAD--DKSIRVRWNAKLWMRDPATGLTTLVNGEPALVHIDGVSVYDLDKDGLIRQHRLENIVLTGQEPLATPIQLAF----AWPATGYATPQAAVP------------FFQP--------------LADALLNFGFSSTSSGASEAGTEGTESE---DGRRAAPTRRAPPPQASASDDETPLERAARERAEDAAKQQRLRDLRTPKTAPKSGVDLFGLTGPQSCETSYDCDAPMVCCDLLFATVCCTGGLLIPTADRRMQGSLQRQAIPIP 387          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A7S1ZVV7_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVV7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.160e-24
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  598 DFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVF----ATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVLVLKARPRPVY--------VDGISAYHVNSDGNAYRHELETVVVNGTPVEPP 999
            +FE+NLGR +  L+ DYP +    P F++Y +DIE+ DP+GV   GLGNY++ F    A + FF     +++  TFRL YD  ++ +R++W   LV    PR +Y        VDGIS Y +N +G   RH+LE ++VN  PV+ P
Sbjct:   98 EFEINLGRAVDRLRKDYPDMLVANPDFEIYHDDIEVIDPSGVKLHGLGNYEKAFSFIHAVINFF--YCKEESGLTFRLHYDAERRNIRVSWNAFLV----PRTIYGGVRNKLHVDGISVYELNREGIVMRHKLERILVNNVPVKEP 237          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A8J5XCD4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCD4_DIALT)

HSP 1 Score: 108 bits (269), Expect = 7.720e-22
Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  598 DFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTY-DWSKQQVRLTWKMVLVLKARP-RPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYAWIN 1020
            +F +N+G++I TLQ DYP +F ++P F ++   IEL DP+GV+ +GL  Y+  F  LR  R   M  A    ++ Y  W   +VR+ W +       P R  ++DG+SAY ++  G   RH L+ ++VNG  VE PF   WIN
Sbjct:   71 EFRLNVGKVIDTLQTDYPVLFEQSPDFSIFESCIELTDPSGVSIRGLSMYRSCFTLLRLMRYT-MASAEMKCKVCYAGWDPYKVRVRWNLAFSSALSPGRTYFIDGVSAYTLSERGLVRRHSLDNIIVNGREVEQPFL-TWIN 211          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: B7G7A7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7A7_PHATC)

HSP 1 Score: 109 bits (272), Expect = 2.710e-21
Identity = 104/379 (27.44%), Postives = 173/379 (45.65%), Query Frame = 1
Query:  598 DFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANT--TFRLTYDWSKQQVRLTWKMVLVLKARPRPV--------YVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYA-------WINLPAWVAG---------NSKNQPVAIPAPFSNSVVSSPDFFAAAYAAAVATDLPSANLADLQDANKVYDTLVGDDLMGTFETEPEVRADF-LKALVVLDSVSSMDSSVGSEAIAEVASSEDEGDAAVAALKENRRVKEKKEGGWF-----GVQGPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIP---GRGRNENDTPAPKRPPPRN 1629
            +FE+++G+ + TL+ DYP+I  + P F +Y +DIE+ DP+GV   G+  YK  F  L      +   + +  TFRL YD ++Q +R+ W   +V    PR +        YVDGIS Y +N DG+   H +E +++N TPV+P             +++P+++           N+ NQ V             P  F+ +   A + + P  +  +  +AN++      D      E + + R  F LK L   + ++        +A  +VA+                  KEK +   F     G+   T C++++DC   +VCCDF  V+ CCS+G +       + +L+P+P   G G  + D     R PPRN
Sbjct:  131 EFELHVGKALDTLRNDYPKILTDQPDFSIYHKDIEVVDPSGVKVHGINTYKGSFRLLHALVAFIYCPSRSGLTFRLCYDKARQAIRIHWNAQVV----PREIFGGSRTTLYVDGISVYEMNRDGDIVAHRIEQLLMNNTPVQPKEGVIAALRQEHGVSVPSFIQNMDSRSGNHNNNNNQLVPFQTVNPWERHREPQLFSLSAMEATSNENPPTDNGN-NNANELLHAQYPDLDWPALEAKNKSRKKFGLKPLTPEEFLALATEIQKMDAEQQVAAQMQRXX-----XXXXXXXKEKDKNSLFNKLFGGLLEDT-CESNYDCERPLVCCDFGFVQKCCSSGSRVVDLRGQL-ALIPVPADVGYGPGDLD-----RNPPRN 492          
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Match: A0A7S0J6I1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6I1_9EUKA)

HSP 1 Score: 104 bits (260), Expect = 8.820e-21
Identity = 57/173 (32.95%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  538 LATPPAGESAKAPRLDGKSPDFEVNLGRLISTLQVDYPRIFFETPSFDVYTEDIELFDPTGVAFK-GLGNYKRVFATLRFFRQVLMKDANTTFRLTYDWSKQQVRLTWKMVLVLK---------ARPRPVYVDGISAYHVNSDGNAYRHELETVVVNGTPVEPPFAYAWINLP 1026
            LA PPA     A  + G    +++N G+ I +L+ DYPRI    P   ++T+ +EL+DP+G   + G G Y +VF  LRF RQ +   +  T+RL    + + +R+ W   L ++         A P  + +DG+SAY ++ +G   +H LE +V++G     P  +AW  LP
Sbjct:   64 LAVPPAFPKLAAKHVYGLPNSYQLNQGKAIDSLRHDYPRILTHEPDLSIFTDGVELYDPSGNRLRSGRGEYAQVFTALRFLRQTMAVGSEVTYRLVV--ANEVIRVRWSAKLYMRPMVVIPGRSAEPPLLQLDGVSAYELDDEGWIRQHRLENIVLSGPSTGVPAEFAWTVLP 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17220.4024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KRU5_9PHAE6.570e-11146.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LJ76_ECTSI3.150e-5638.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCH5_9PHAE8.480e-4932.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIZ0_9STRA6.020e-3934.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A516_9STRA1.270e-3629.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0M0JBU2_9EUKA3.420e-2831.98Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S1ZVV7_9STRA2.160e-2440.41Hypothetical protein (Fragment) n=3 Tax=Ditylum br... [more]
A0A8J5XCD4_DIALT7.720e-2238.46Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
B7G7A7_PHATC2.710e-2127.44Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S0J6I1_9EUKA8.820e-2132.95Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17220contigH-paniculata_contig17220:938..4952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.5
Seed ortholog evalue3e-100
Seed eggNOG ortholog2880.D8LGI3
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Uncharacterized conserved protein (DUF2358)
EggNOG OGs2CYHV@1,2S4H3@2759
Ec32 ortholog descriptionProtein of unknown function DUF2358
Ec32 orthologEc-10_001970.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2628
Cds size1431
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17220.4024.1prot_H-paniculata_contig17220.4024.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17220 1904..4721 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929358.3990154-UTR-H-paniculata_contig17220:937..19031622929358.3990154-UTR-H-paniculata_contig17220:937..1903Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17220 938..1903 -
1691480829.240497-UTR-H-paniculata_contig17220:937..19031691480829.240497-UTR-H-paniculata_contig17220:937..1903Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17220 938..1903 -
1622929358.4581637-UTR-H-paniculata_contig17220:4721..49521622929358.4581637-UTR-H-paniculata_contig17220:4721..4952Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17220 4722..4952 -
1691480829.2786872-UTR-H-paniculata_contig17220:4721..49521691480829.2786872-UTR-H-paniculata_contig17220:4721..4952Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17220 4722..4952 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929358.4171355-CDS-H-paniculata_contig17220:1903..28511622929358.4171355-CDS-H-paniculata_contig17220:1903..2851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17220 1904..2851 -
1691480829.253353-CDS-H-paniculata_contig17220:1903..28511691480829.253353-CDS-H-paniculata_contig17220:1903..2851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17220 1904..2851 -
1622929358.4422503-CDS-H-paniculata_contig17220:4238..47211622929358.4422503-CDS-H-paniculata_contig17220:4238..4721Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17220 4239..4721 -
1691480829.268813-CDS-H-paniculata_contig17220:4238..47211691480829.268813-CDS-H-paniculata_contig17220:4238..4721Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17220 4239..4721 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17220.4024.1

>prot_H-paniculata_contig17220.4024.1 ID=prot_H-paniculata_contig17220.4024.1|Name=mRNA_H-paniculata_contig17220.4024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=477bp
MGDGGVVSGVLKGSRAISAVFLATACCSSLWSAQAFAFCFNVPTPSLVAN
TVSGRAITARQVHRSSNQHASPSPRMAIASAAEGRRTTGVSPIISRDVGG
GVLATPPAGESAKAPRLDGKSPDFEVNLGRLISTLQVDYPRIFFETPSFD
VYTEDIELFDPTGVAFKGLGNYKRVFATLRFFRQVLMKDANTTFRLTYDW
SKQQVRLTWKMVLVLKARPRPVYVDGISAYHVNSDGNAYRHELETVVVNG
TPVEPPFAYAWINLPAWVAGNSKNQPVAIPAPFSNSVVSSPDFFAAAYAA
AVATDLPSANLADLQDANKVYDTLVGDDLMGTFETEPEVRADFLKALVVL
DSVSSMDSSVGSEAIAEVASSEDEGDAAVAALKENRRVKEKKEGGWFGVQ
GPTECDTSWDCTGGMVCCDFLLVKVCCSNGVKQPKFGDLIPSLVPIPGRG
RNENDTPAPKRPPPRNGGSSNGKITW*
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mRNA from alignment at H-paniculata_contig17220:938..4952-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17220.4024.1 ID=mRNA_H-paniculata_contig17220.4024.1|Name=mRNA_H-paniculata_contig17220.4024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4015bp|location=Sequence derived from alignment at H-paniculata_contig17220:938..4952- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCACAATTGTTCGGGACATTTATTTCGGTTCTGGATTAATATCGACCAAT GAAAGCGCGCAGTATGTGATGCGTCAGAAGCATTCATCCGTCTCCCTCAT CATTCCATCTCTCCCCACCTGCGTCACGTTCAGCAGTCTGCACTCAGCCA CAGAACAAAATCGTCAACATCAAGCGGCGGATACACAGCTGCCCGACAAC GAGAAAGTAGGCAGATAGGCAGACGGAAAAAATGGGTGATGGTGGCGTAG TAAGCGGGGTTTTAAAAGGTAGTCGAGCCATTTCAGCAGTTTTCCTTGCG ACTGCCTGTTGCTCCTCCTTGTGGTCCGCCCAAGCCTTCGCCTTTTGTTT TAACGTACCAACGCCCTCACTCGTTGCGAACACGGTGTCGGGACGAGCGA TCACCGCGCGCCAGGTGCATCGGTCGTCCAACCAGCATGCTTCCCCGTCA CCACGAATGGCCATAGCCTCCGCGGCTGAGGGCCGAAGGACGACTGGGGT GAGTCCCATCATTTCGCGGGATGTTGGTGGGGGGGTGTTGGCAACACCTC CTGCGGGGGAAAGTGCGAAGGCGCCCAGGCTTGATGGGAAAAGCCCGGAC TTCGAGGTGAACCTGGGGCGTTTGATCTCCACGCTACAGGTAGATTACCC TAGGATATTCTTCGAGACGCCCTCGTTCGACGTCTACACGGAAGACATCG AGCTTTTTGACCCGGTGAGTGAATTTGTTTCGTTATTTTGTTATTTTTAT CCATGTGTGCGTTGATCCTGTCATCATTGGCACTGTTGTACTGTGACGAA GTCCCAACTTAGTACCGTCAGTAAAAAAGTACTCGAAATTGCGGGACACA GGCACACAAGCTGTTTAGTATCTGCTTGGTCGCCTCCCCACCTCCCGACA ACGTCCGTGATCAAATGAGCACTGCGAGGCGTACCTAATGTACTTTGCCG TTGTTCGCCATCAGCGGTTATCGGTGGTCATCAGCGTTTTTTCGTGGCGA ATGGCAACCCTTAAGGTCCTTGCTCACTTCGTGTGCCTTTGCGTGCGTGC TGACAACGTTCAACGTTTCTTTGGGCTGTTTGTTAACGACCAACAGCTTG AAGAAGATAAAAGATGAAAGTTGAAACGTGCAAACCCTAACTAGCATTCA GAGTGGACACCAACAATCTAACTGCGAAACCTGAGTATCTTTTTTTGCCC CATTCGCTTCTCATATCCTAGCTGCTGAGATACCTCAAACCAAGCAGCCC CGCTTTCCGCTACCCTGCGCACGATGAGCCACCTCAGTCATGAGTCCACT CACAGATAACTTAGCGTTTGTCGTTCTTTGGCATGTGAACGTCAGATGAG CGTTCCTAGCTCTTGGTCGTTCTTCTGGAAATATGAAAATTAACGGTTTG GAAGGCTCTTTCTGAACAAAGAAGGAACCTGACGCAGGCTTTCAGGGTTG TAATCATTGTTGGCAGGAACATTCCAACCCTTTGTCTCCTCTGTACGTTG CTGTACTGGCTGTATAGATATAAAGTCCTTATCTCTGTATTCATGTCACA GACTTCGCTTATGCCTGTTTTTGTCACGCGATTGTTTTGGGAAATGTGGT TCTGGAGGTGTTGACCGGTCAATTTATCTGACTACCCTCTTGTGCAACTA TTTTTTGCACGTTTCCAGTCCACATGTCGTGACATCTGTTTTTCTCGTTC ATCCAAGCCTCGAAACCATGAGTAACTGGTCATTTATCTCCGTTCTTTGT GCCTTTGAAACCACGAACAATTCGCGCTGGTTGTTGTTCAAGCTGAGACA ACGAACTAAGTATGCTTGTTCAGGGCAACAAATATCTTAGTAGCATACTT AGTAGAAATTGATATGGCCAGGCGGGTACTACTGGGTCAGCTGCAATAAC ATCCCTCTCAGAAACTCCCGCTTCTTTCTCGATGCCGAAAGTCTTTCACT GACAAAACAGAGTCCACAACGACTAGCTGCTAAACGCACTACTGTCCTGT CACTTTCAACATCAGTACGCTCACATTTGTTCTTGGACTGCCCTAACCCT TTTGGGATTCCCCCACTTTTTTTTGTTCACGTCTGACGCCCTTCACAACA GACCGGGGTAGCATTCAAAGGTCTCGGGAACTATAAACGAGTGTTCGCGA CGCTGCGGTTCTTCAGGCAGGTGCTCATGAAGGACGCCAACACCACCTTC CGCCTCACATACGACTGGAGCAAGCAGCAGGTACGCCTCACATGGAAGAT GGTCCTTGTGCTGAAGGCACGTCCCAGGCCGGTGTACGTGGATGGTATCA GCGCGTATCATGTGAACAGCGACGGTAACGCTTACCGACACGAGCTTGAA ACGGTAGTGGTAAACGGTACTCCGGTGGAGCCGCCTTTTGCGTACGCGTG GATCAACTTGCCTGCCTGGGTGGCGGGCAACAGCAAGAATCAACCGGTTG CGATACCTGCCCCCTTTTCCAACAGTGTTGTGTCATCACCCGATTTTTTT GCAGCCGCATACGCGGCGGCCGTAGCGACGGATCTGCCTTCGGCGAATCT CGCAGACCTCCAGGACGCAAATAAGGTGTACGATACCTTGGTGGGCGACG ATTTGATGGGAACGTTCGAGACGGAACCGGAGGTGCGCGCGGATTTCTTG AAAGCCTTGGTGGTTTTGGATTCCGTTTCGTCCATGGATTCGTCAGTCGG TAGCGAGGCAATAGCGGAGGTTGCGAGCTCGGAGGATGAAGGCGACGCCG CGGTGGCGGCGTTGAAGGAAAATAGACGTGTCAAGGAGAAGAAAGAAGGG GGATGGTTCGGGGTGCAGGGACCGACGGAGTGCGACACGTCGTGGGACTG CACAGGGGGCATGGTGTGCTGTGACTTTTTGTTAGTAAAGGTGTGCTGCA GCAACGGGGTGAAGCAGCCAAAATTCGGAGACCTGATCCCCTCGCTTGTG CCAATACCAGGACGTGGTAGGAACGAGAATGACACGCCCGCGCCCAAGAG GCCACCGCCACGAAATGGCGGATCTTCCAACGGGAAAATAACATGGTGAT TTTATAGCAGAGGGTACGAGAACAAATTGTGGTGATTTTGTGGTCGAAAG GACGAGAACCACGGGTTGTATGTTTCGGGGCTTGGGCGGAGCAGGGGCAC GGGTGGGGGAGACAGAGGATGGAACTCGATAGTTGACAGGGGCGACGTTC ACGAAGAATTTTAAGGATGCAGAGGACGAAATATTTTTGAGAGGTGCTTC AGTGTATGTGTGATCAGATTATGCTTTTGTGCTGCGTGTTCCAGTGCTGG TTTTGGCAAGGGTGAAGTTAGAGCTATCTGCTGAGCGAGAGTGAGGAATC AGGAGGTCAACGCGCGTCTGTTGAAGTCTCGGTCGTAATTGTAAAGTCGA GTAGAGAAGTCGGAGTCCCATTGTGGTCTTGGGTTCTGTAGTAGAGTGGG ATGTGAGAAGTTGCCTACCGCGGCTGACTTTGAGGTTGAATGAATCGCTA CAGCGCGTGCGGGGTGGTGGAGAAGAAGAGGGGGGAGCGGGGGGAGCTCA TGATTCGAAGGAAGTGCACATTTTTTGTTCACGTTGATCTTGCTGCGGTG TGAATGCCCATGCTATTTTGTTTTATATAATAATGGAGGCAGATGAGTTG CTGAATTTCGCCCCAACAAAAACACTATAGGAGGGTAGACGTGTATAGTT GATCTTCAGTTCGAGTGCGTGGATCCAGAGGTTGGACTTTTGTAAGGTTC CGTTCACCTGTCTCGTGTCCCACGTCGGCTGTGACTACTTCTTATTATTG CGTTGAACAGTGAATTCAGTCCGCGTATGTACTTGTCACCGTGGGTTACG TATGGTTTGTATTTACAATCGTTTTGCAGTAGTTGAATGAAAAGATTCTA GAGGACGTATGTGTAGTAAGGTTGAAGGTAATTGTTTTTAAAGAGAAAAG TCTTGTAAATAATAATAATGAAAACTTTTACTAACACAGGCCAATTAACA TGGTCTTTTTGTATG
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Coding sequence (CDS) from alignment at H-paniculata_contig17220:938..4952-

>mRNA_H-paniculata_contig17220.4024.1 ID=mRNA_H-paniculata_contig17220.4024.1|Name=mRNA_H-paniculata_contig17220.4024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2862bp|location=Sequence derived from alignment at H-paniculata_contig17220:938..4952- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGATGGTGGCGTAGTAAGCGGGGTTTTAAAAGGTAGTCGAGCCAT
TTCAGCAGTTTTCCTTGCGACTGCCTGTTGCTCCTCCTTGTGGTCCGCCC
AAGCCTTCGCCTTTTGTTTTAACGTACCAACGCCCTCACTCGTTGCGAAC
ACGGTGTCGGGACGAGCGATCACCGCGCGCCAGGTGCATCGGTCGTCCAA
CCAGCATGCTTCCCCGTCACCACGAATGGCCATAGCCTCCGCGGCTGAGG
GCCGAAGGACGACTGGGGTGAGTCCCATCATTTCGCGGGATGTTGGTGGG
GGGGTGTTGGCAACACCTCCTGCGGGGGAAAGTGCGAAGGCGCCCAGGCT
TGATGGGAAAAGCCCGGACTTCGAGGTGAACCTGGGGCGTTTGATCTCCA
CGCTACAGGTAGATTACCCTAGGATATTCTTCGAGACGCCCTCGTTCGAC
GTCTACACGGAAGACATCGAGCTTTTTGACCCGATGGGTGATGGTGGCGT
AGTAAGCGGGGTTTTAAAAGGTAGTCGAGCCATTTCAGCAGTTTTCCTTG
CGACTGCCTGTTGCTCCTCCTTGTGGTCCGCCCAAGCCTTCGCCTTTTGT
TTTAACGTACCAACGCCCTCACTCGTTGCGAACACGGTGTCGGGACGAGC
GATCACCGCGCGCCAGGTGCATCGGTCGTCCAACCAGCATGCTTCCCCGT
CACCACGAATGGCCATAGCCTCCGCGGCTGAGGGCCGAAGGACGACTGGG
GTGAGTCCCATCATTTCGCGGGATGTTGGTGGGGGGGTGTTGGCAACACC
TCCTGCGGGGGAAAGTGCGAAGGCGCCCAGGCTTGATGGGAAAAGCCCGG
ACTTCGAGGTGAACCTGGGGCGTTTGATCTCCACGCTACAGGTAGATTAC
CCTAGGATATTCTTCGAGACGCCCTCGTTCGACGTCTACACGGAAGACAT
CGAGCTTTTTGACCCGACCGGGGTAGCATTCAAAGGTCTCGGGAACTATA
AACGAGTGTTCGCGACGCTGCGGTTCTTCAGGCAGGTGCTCATGAAGGAC
GCCAACACCACCTTCCGCCTCACATACGACTGGAGCAAGCAGCAGGTACG
CCTCACATGGAAGATGGTCCTTGTGCTGAAGGCACGTCCCAGGCCGGTGT
ACGTGGATGGTATCAGCGCGTATCATGTGAACAGCGACGGTAACGCTTAC
CGACACGAGCTTGAAACGGTAGTGGTAAACGGTACTCCGGTGGAGCCGCC
TTTTGCGTACGCGTGGATCAACTTGCCTGCCTGGGTGGCGGGCAACAGCA
AGAATCAACCGGTTGCGATACCTGCCCCCTTTTCCAACAGTGTTGTGTCA
TCACCCGATTTTTTTGCAGCCGCATACGCGGCGGCCGTAGCGACGGATCT
GCCTTCGGCGAATCTCGCAGACCTCCAGGACGCAAATAAGGTGTACGATA
CCTTGGTGGGCGACGATTTGATGGGAACGTTCGAGACGGAACCGGAGGTG
CGCGCGGATTTCTTGAAAGCCTTGGTGGTTTTGGATTCCGTTTCGTCCAT
GGATTCGTCAGTCGGTAGCGAGGCAATAGCGGAGGTTGCGAGCTCGGAGG
ATGAAGGCGACGCCGCGGTGGCGGCGTTGAAGGAAAATAGACGTGTCAAG
GAGAAGAAAGAAGGGGGATGGTTCGGGGTGCAGGGACCGACGGAGTGCGA
CACGTCGTGGGACTGCACAGGGGGCATGGTGTGCTGTGACTTTTTGTTAG
TAAAGGTGTGCTGCAGCAACGGGGTGAAGCAGCCAAAATTCGGAGACCTG
ATCCCCTCGCTTGTGCCAATACCAGGACGTGGTAGGAACGAGAATGACAC
GCCCGCGCCCAAGAGGCCACCGCCACGAAATGGCGGATCTTCCAACGGGA
AAATAACATGGTGAACCGGGGTAGCATTCAAAGGTCTCGGGAACTATAAA
CGAGTGTTCGCGACGCTGCGGTTCTTCAGGCAGGTGCTCATGAAGGACGC
CAACACCACCTTCCGCCTCACATACGACTGGAGCAAGCAGCAGGTACGCC
TCACATGGAAGATGGTCCTTGTGCTGAAGGCACGTCCCAGGCCGGTGTAC
GTGGATGGTATCAGCGCGTATCATGTGAACAGCGACGGTAACGCTTACCG
ACACGAGCTTGAAACGGTAGTGGTAAACGGTACTCCGGTGGAGCCGCCTT
TTGCGTACGCGTGGATCAACTTGCCTGCCTGGGTGGCGGGCAACAGCAAG
AATCAACCGGTTGCGATACCTGCCCCCTTTTCCAACAGTGTTGTGTCATC
ACCCGATTTTTTTGCAGCCGCATACGCGGCGGCCGTAGCGACGGATCTGC
CTTCGGCGAATCTCGCAGACCTCCAGGACGCAAATAAGGTGTACGATACC
TTGGTGGGCGACGATTTGATGGGAACGTTCGAGACGGAACCGGAGGTGCG
CGCGGATTTCTTGAAAGCCTTGGTGGTTTTGGATTCCGTTTCGTCCATGG
ATTCGTCAGTCGGTAGCGAGGCAATAGCGGAGGTTGCGAGCTCGGAGGAT
GAAGGCGACGCCGCGGTGGCGGCGTTGAAGGAAAATAGACGTGTCAAGGA
GAAGAAAGAAGGGGGATGGTTCGGGGTGCAGGGACCGACGGAGTGCGACA
CGTCGTGGGACTGCACAGGGGGCATGGTGTGCTGTGACTTTTTGTTAGTA
AAGGTGTGCTGCAGCAACGGGGTGAAGCAGCCAAAATTCGGAGACCTGAT
CCCCTCGCTTGTGCCAATACCAGGACGTGGTAGGAACGAGAATGACACGC
CCGCGCCCAAGAGGCCACCGCCACGAAATGGCGGATCTTCCAACGGGAAA
ATAACATGGTGA
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