prot_H-paniculata_contig1062.401.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1062.401.1
Unique Nameprot_H-paniculata_contig1062.401.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
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BLAST of mRNA_H-paniculata_contig1062.401.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 2.400e-5
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    9 CAGVRCLNQPSYGVMGSKKMEFCSQHAKAEMVDVLNKKC 47
            C    C  +P+YGV GSKK EFCSQHA+  MV+V NK+C
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 42
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BLAST of mRNA_H-paniculata_contig1062.401.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 5.020e-5
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    9 CAGVRCLNQPSYGVMGSKKMEFCSQHAKAEMVDVLNKKC 47
            C    C  +P+YGV GSKK EFCSQHA+  MV+V NK+C
Sbjct:   64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1062.401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI73_ECTSI2.400e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE5.020e-558.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1062contigH-paniculata_contig1062:28919..29599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1062.401.1mRNA_H-paniculata_contig1062.401.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1062 26942..29599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1062.401.1 ID=prot_H-paniculata_contig1062.401.1|Name=mRNA_H-paniculata_contig1062.401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MKGMPCALCAGVRCLNQPSYGVMGSKKMEFCSQHAKAEMVDVLNKKCSNQ
GCSKRASCGVAGTKKAEFCSQHKVAEMVDVVSKKCNNSGCSKKPSYGVAG
TKKAEFCSQHAEAEMVDVVTKRCNNSGCSKQPSYGVAGSRKAEFCSQHAK
AEMVDVVNKRCNNSGCSKQPTYGVVGSRKAEFCSQHKVAEMVDVVNKKCG
NQGCSKRASYGVAGTKKAEFCSQHKVA
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