mRNA_H-paniculata_contig17166.3996.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17166.3996.1
Unique NamemRNA_H-paniculata_contig17166.3996.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 161 bits (407), Expect = 1.160e-43
Identity = 76/191 (39.79%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  243 FRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVE-GKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIA 812
            F++ ++G +  VLG+ +RRDR  G +TISQ +Y + +LKR+G ++C+ V TP+E GK      D     N+ EY+ ++    Y +  TRPD+A AV   ++ M  PS+  +   KR+ RY+    + G+ F GKS    L  + D DWA D++ R+ST+GY+F++NG  +SWCS++Q  V  S+T+AEY+A
Sbjct:   13 FKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVA 203          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A6S7KSC5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KSC5_PARCT)

HSP 1 Score: 159 bits (401), Expect = 2.580e-43
Identity = 82/191 (42.93%), Postives = 118/191 (61.78%), Query Frame = 3
Query:  243 FRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVE-GKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIA 812
            F++++LG +S +LG+ ++RDR + T+TISQ  Y   VLKR+  +EC+ V TP+E GK     +D     N  EY+ ++    Y +  TRPD+A AV   ++ M  PS+  +   KRI RY+    + GITF  K     L  + D DWA D E R+ST+GYIF+++G  ISWCS+KQ  V  SST+AEY+A
Sbjct:   53 FKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDETPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMA 243          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177VUP4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VUP4_9BASI)

HSP 1 Score: 162 bits (411), Expect = 5.710e-43
Identity = 83/205 (40.49%), Postives = 120/205 (58.54%), Query Frame = 3
Query:  237 STFRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKS-GNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 845
            S F+  +LG     LGI + R+  +GTIT+ Q  Y +EVL R+G  EC    TP++ K  +  A  G++  +  +++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFGG+ +G+  LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:  129 SLFKGTDLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANLRKATDGEARADKKKFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGRESLML 333          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177T2R9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T2R9_9BASI)

HSP 1 Score: 157 bits (397), Expect = 4.040e-42
Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  243 FRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKS-GNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 845
            F+  +LG     LGI + R    GTIT+ Q  Y +EVL R+G  +C    TP++ K  +  A  G++  +  E++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFGG+ +G+  L  FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:   30 FKGTDLGPAHHCLGIRISRSWEEGTITLDQERYAKEVLARFGMSDCNPAKTPMDQKASLRKAVDGEARADKKEFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGATLTFGGQKDGNVSLAGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALML 232          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177V816_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia caries TaxID=13290 RepID=A0A177V816_9BASI)

HSP 1 Score: 164 bits (415), Expect = 1.060e-41
Identity = 84/205 (40.98%), Postives = 120/205 (58.54%), Query Frame = 3
Query:  237 STFRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKS-GNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 845
            S F+  +LG     LGI + R+  +GTIT+ Q  Y +EVL R+G  EC    TP++ K  +  A  G++  +  E++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFGG+ +G+  LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:  534 SLFKGTDLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANLRKATDGEARADKKEFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGRESLML 738          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A176W9J0_MARPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176W9J0_MARPO)

HSP 1 Score: 161 bits (407), Expect = 2.140e-41
Identity = 95/243 (39.09%), Postives = 139/243 (57.20%), Query Frame = 3
Query:  234 KSTFRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAA----DRGKSGNST--EYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGK-SNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYILGSY*DR*VSDAGGARHCVRTLNQLLISVRNLA 941
            KS F+MK++G   R+LG+E+ RD     + +SQG Y R +L R+   + +GV TP+    K+SAA    D  + GN +   Y   V S MY    TRPDIA+A+ + +R M +P +V +   K I RYL +  D G+ F G   N   L  +VD D+ +D++ R+STTGY+F L GG+ISW S  Q+ V  S+T+AEY+AA E  +    L    DR + + G  +H V  L+    S+ +LA
Sbjct:  319 KSAFKMKDMGESKRILGMEIHRDHEQKKLWLSQGKYVRRILDRFNMMDSKGVWTPLAAHFKLSAAQCPTDAVEKGNMSCVPYEQAVGSLMYLMVCTRPDIAFAMGKVSRYMSNPGKVHWEAVKWILRYLKSTLDYGLLFDGLLDNAKSLFGYVDADYGQDLDKRRSTTGYVFTLGGGSISWRSTLQKCVAQSTTEAEYVAAAEAAKEAIWL----DRLIMEMG-LKHGVVNLHSDSHSILHLA 556          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177VLY9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VLY9_9BASI)

HSP 1 Score: 160 bits (406), Expect = 1.720e-40
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = 3
Query:  243 FRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKI-SAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 845
            F+  +LG     LGI + R+    TIT+ Q  Y +EVL R+G  +C    TP++ K  +  AAD     +  EY+ +V    Y +  TRPD+AYAV    R   DP+    +   R+ RYL       +TFGG  +G+ +LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:  531 FKGTDLGPAHHCLGIRINRNWDEDTITLDQERYAKEVLARFGMSDCNPARTPMDQKTSLRKAADGEARADKREYQAIVGCLAYLAQGTRPDLAYAVSTLGRYGSDPTETHRTAANRVLRYLKRTSSAKLTFGGSRDGNVNLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALML 733          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177VM55_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VM55_9BASI)

HSP 1 Score: 161 bits (407), Expect = 1.800e-40
Identity = 84/205 (40.98%), Postives = 117/205 (57.07%), Query Frame = 3
Query:  237 STFRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKI-SAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 845
            S F+  +LG     LGI + R+  NGTIT+ Q  Y +EVL R+G  EC    TP++ K  +  A D     +  E++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFG + +G+  LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct: 1182 SLFKGTDLGPAHHCLGIRISRNWENGTITLDQERYAKEVLSRFGMTECNPAKTPMDQKASLRKATDDETRADKREFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGAKLTFGEQKDGNVSLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVVGRESLML 1386          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 160 bits (404), Expect = 4.400e-40
Identity = 82/191 (42.93%), Postives = 119/191 (62.30%), Query Frame = 3
Query:  243 FRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVE-GKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIA 812
            F++++LG +S +LG+ ++RDR + T+TISQ  Y   VLKR+  +EC+ V TP+E GK     +D  +  N  EY+ ++    Y +  TRPD+A AV   ++ M  PS+  +   KRI RY+    + GITF  K     L  + D DWA D E R+ST+GYIF+++G  ISWCS+KQ  V  SST+AEY+A
Sbjct: 1059 FKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMA 1249          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177V4F2_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia walkeri TaxID=117179 RepID=A0A177V4F2_9BASI)

HSP 1 Score: 150 bits (380), Expect = 1.720e-39
Identity = 80/202 (39.60%), Postives = 119/202 (58.91%), Query Frame = 3
Query:  243 FRMKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKSGNSTE-YRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 845
            F+ K+LG    +LGIE++R+R   T+T+ QG Y REVL+R+G   C+   TP+E K+ ++    G+     + YR +V S M+ +  TR D  +      R + DPS  + +  KR+ R L    D  +TF G +NG  +  FVD DWA D  DRKST+G+   + GGA++W ++KQ  V +S+T+AEY+AAG  GR    L
Sbjct:   51 FKGKDLGDAHHLLGIEIKRNREKRTLTMFQGRYAREVLERFGMSNCKPARTPMETKISLTPRAEGEEKADAQLYRAIVGSLMWLAMGTRVDYGFRDGFLGRFVSDPSVKNLTAAKRVLRDLKGTLDAELTFDG-TNGLRIAAFVDADWAGDKADRKSTSGFAIMMAGGAVTWGAKKQTAVAFSTTEAEYVAAGLAGRETIAL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT1.160e-4339.79Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6S7KSC5_PARCT2.580e-4342.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VUP4_9BASI5.710e-4340.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T2R9_9BASI4.040e-4239.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177V816_9BASI1.060e-4140.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A176W9J0_MARPO2.140e-4139.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VLY9_9BASI1.720e-4040.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VM55_9BASI1.800e-4040.98Integrase catalytic domain-containing protein n=1 ... [more]
A0A7D9IUY0_PARCT4.400e-4042.93Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A177V4F2_9BASI1.720e-3939.60Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17166contigH-paniculata_contig17166:842..1892 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.5
Seed ortholog evalue2.1e-34
Seed eggNOG ortholog164328.Phyra72549
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QHRW@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size973
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17166.3996.1prot_H-paniculata_contig17166.3996.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17166 1090..1776 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929355.0152059-UTR-H-paniculata_contig17166:841..10891622929355.0152059-UTR-H-paniculata_contig17166:841..1089Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17166 842..1089 +
1691480827.7494347-UTR-H-paniculata_contig17166:841..10891691480827.7494347-UTR-H-paniculata_contig17166:841..1089Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17166 842..1089 +
1622929355.0662022-UTR-H-paniculata_contig17166:1776..18921622929355.0662022-UTR-H-paniculata_contig17166:1776..1892Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17166 1777..1892 +
1691480827.7741015-UTR-H-paniculata_contig17166:1776..18921691480827.7741015-UTR-H-paniculata_contig17166:1776..1892Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17166 1777..1892 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929355.0384367-CDS-H-paniculata_contig17166:1089..12711622929355.0384367-CDS-H-paniculata_contig17166:1089..1271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17166 1090..1271 +
1691480827.7588632-CDS-H-paniculata_contig17166:1089..12711691480827.7588632-CDS-H-paniculata_contig17166:1089..1271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17166 1090..1271 +
1622929355.0539372-CDS-H-paniculata_contig17166:1349..17761622929355.0539372-CDS-H-paniculata_contig17166:1349..1776Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17166 1350..1776 +
1691480827.7664611-CDS-H-paniculata_contig17166:1349..17761691480827.7664611-CDS-H-paniculata_contig17166:1349..1776Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17166 1350..1776 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17166.3996.1

>prot_H-paniculata_contig17166.3996.1 ID=prot_H-paniculata_contig17166.3996.1|Name=mRNA_H-paniculata_contig17166.3996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTP
VEGKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRM
GDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVE
DRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYILG
SY*
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mRNA from alignment at H-paniculata_contig17166:842..1892+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17166.3996.1 ID=mRNA_H-paniculata_contig17166.3996.1|Name=mRNA_H-paniculata_contig17166.3996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1051bp|location=Sequence derived from alignment at H-paniculata_contig17166:842..1892+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTGTGCGCCACCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCG AAACTGGAATAACACGCTTGACTATTTTCTTGTTGGGATAGGACTCGACC GTTCCACTACCGACTCATGCTTGTACTTTTCCCGTGACGAAGGGGGAGAG GCAAACCTTCTGATGGCCGTTTATGTTGACGACCTGGTCATTGCTGGCCG TCGTGAGAAAGTAGACGATTTCAAGCATAACATAAGTCAACGTTTAGGAT GAAAAACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTG ACCGCCCTAATGGTACCATAACCATCTCGCAGGGCAGCTACACCCGCGAG GTACTAAAAAGATACGGTTTTGACGAGTGTCGAGGAGTACCCACCCCTGT AGAGGGAAAAGTGAAGATTTCGGCAGCCGAGTCGGCCGGCAAGCCCTCCG AACCGAAGTCACTTGGCACTGTACTGTCGGACATAGGCGCAGGAGTACAA GAAAGCAGCAGAGGGAAAAGTGGCAATTCAACTGAGTACAGAGGCATGGT ACGATCATTCATGTACGCCTCGGCAAGAACTAGACCTGATATAGCATACG CGGTACACCAAGCAGCACGTCGTATGGGGGACCCATCTCGAGTAGACTTC AGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCCTGACCTCGG CATTACGTTCGGTGGTAAGAGTAATGGCCACGACCTGGAAGAATTCGTTG ATGACGATTGGGCGGAAGATGTTGAGGACCGAAAGTCCACAACGGGATAC ATTTTCGAGCTAAATGGTGGTGCGATAAGTTGGTGCTCTAGGAAGCAACA GTTAGTCAAGTGGTCCAGTACAGACGCAGAGTACATTGCTGCAGGAGAAT GGGGAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAAGTTTCG GATGCAGGGGGAGCACGACATTGTGTGAGGACACTAAATCAGCTATTAAT CTCAGTAAGGAACCTGGCGCACACTGCAGGACAAAGCACATCGGAGTGCG C
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Coding sequence (CDS) from alignment at H-paniculata_contig17166:842..1892+

>mRNA_H-paniculata_contig17166.3996.1 ID=mRNA_H-paniculata_contig17166.3996.1|Name=mRNA_H-paniculata_contig17166.3996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig17166:842..1892+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACG
TGACCGCCCTAATGGTACCATAACCATCTCGCAGGGCAGCTACACCCGCG
AGGTACTAAAAAGATACGGTTTTGACGAGTGTCGAGGAGTACCCACCCCT
GTAGAGGGAAAAGTGAAGATTTCGGCAGCCGAATGAAAAACTTGGGCTCT
CTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCGCCCTAATGGTAC
CATAACCATCTCGCAGGGCAGCTACACCCGCGAGGTACTAAAAAGATACG
GTTTTGACGAGTGTCGAGGAGTACCCACCCCTGTAGAGGGAAAAGTGAAG
ATTTCGGCAGCCGACAGAGGGAAAAGTGGCAATTCAACTGAGTACAGAGG
CATGGTACGATCATTCATGTACGCCTCGGCAAGAACTAGACCTGATATAG
CATACGCGGTACACCAAGCAGCACGTCGTATGGGGGACCCATCTCGAGTA
GACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCCTGA
CCTCGGCATTACGTTCGGTGGTAAGAGTAATGGCCACGACCTGGAAGAAT
TCGTTGATGACGATTGGGCGGAAGATGTTGAGGACCGAAAGTCCACAACG
GGATACATTTTCGAGCTAAATGGTGGTGCGATAAGTTGGTGCTCTAGGAA
GCAACAGTTAGTCAAGTGGTCCAGTACAGACGCAGAGTACATTGCTGCAG
GAGAATGGGGAAGGAGACGGTATATCTTAGGGAGTTACTAGCAGAGGGAA
AAGTGGCAATTCAACTGAGTACAGAGGCATGGTACGATCATTCATGTACG
CCTCGGCAAGAACTAGACCTGATATAGCATACGCGGTACACCAAGCAGCA
CGTCGTATGGGGGACCCATCTCGAGTAGACTTCAGTACATGCAAGCGCAT
TTTTCGTTATCTCAGTACTGTGCCTGACCTCGGCATTACGTTCGGTGGTA
AGAGTAATGGCCACGACCTGGAAGAATTCGTTGATGACGATTGGGCGGAA
GATGTTGAGGACCGAAAGTCCACAACGGGATACATTTTCGAGCTAAATGG
TGGTGCGATAAGTTGGTGCTCTAGGAAGCAACAGTTAGTCAAGTGGTCCA
GTACAGACGCAGAGTACATTGCTGCAGGAGAATGGGGAAGGAGACGGTAT
ATCTTAGGGAGTTACTAG
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