prot_H-paniculata_contig17121.3976.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17121.3976.1
Unique Nameprot_H-paniculata_contig17121.3976.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
BLAST of mRNA_H-paniculata_contig17121.3976.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.960e-49
Identity = 104/173 (60.12%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 RSSLSRRSSSIEELTMRDRQINDGSFKHGLSTLGFKLSEAAMTEMYRKLDVNKDGVIDLMEFTRFCLEIPSMAWKAERARRGIVSG-----ADRELDKAARDMANEALNNTASGLDSIAGGDGGLSAAAAAESKEPKVSLGRTVFRGEKFFWRTKYLIEVVVQLNAKEGFMAV 168
            RSS+SRRSS  EE  MRDR I   SF+HGL+TLGF +S     +M+ +LD N DG IDL EFTRFCLEIPSM WKAERARRGI+        DREL+KAARDMANE    T S  D+  GG GG  A       EP V LG+  +RGEKFFWRTK LIEVVVQLN  +GF+A+
Sbjct:  277 RSSMSRRSSLAEEAMMRDRLITSASFQHGLATLGFNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANE----TVSANDAAEGGLGGELA-----KLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAI 440          
BLAST of mRNA_H-paniculata_contig17121.3976.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 7.980e-13
Identity = 48/146 (32.88%), Postives = 69/146 (47.26%), Query Frame = 0
Query:   26 FKHGLSTLG---FKLSEAAMTEMYRKLDVNKDGVIDLMEFTRFCLEIPSMAWKAERARRGIVSGADRELDKAARDMANEALNNTASGLDSIAGGDGGLSAAAAAESKEPKVSLGRTVFRGEKFFWRTKYLIEVVVQLNAKEGFMAV 168
            F+  L  LG   F L E  +  +    D + +G ++L EF  FCL IPS+ W+AE+ARR   + +  EL+ AAR +A                            S    V +G  V +G +FFWR+K  I+V + LNA EG M +
Sbjct:  148 FESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNAESKDELNVAARKIARR-------------------------RSSLRAVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTI 268          
BLAST of mRNA_H-paniculata_contig17121.3976.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.960e-11
Identity = 46/135 (34.07%), Postives = 65/135 (48.15%), Query Frame = 0
Query:   30 LSTLGFKLSEAAMTEMYRKLDVNKDGVIDLMEFTRFCLEIPSMAWKAERARRGIVSGADRELDKAARDMANEALNNTASGLDSIAGGDGGLSAAAAAESKEPKVSLGRTVFRGEKFFWRTKYLIEVVVQLNAKEG 164
            LS   F LS A + E+    D N++G I+L EF  FC+ IPS+AWKAERARR         L +AAR+  +E   +T   +D                       LG  +   + FFWR++  ++VV+  N  EG
Sbjct:   75 LSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARRMSAVDGPEALTEAARN--SERRRSTCKAVD-----------------------LGEKIHDRKMFFWRSQQNLDVVLHENIGEG 184          
BLAST of mRNA_H-paniculata_contig17121.3976.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 9.660e-8
Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = 0
Query:   50 DVNKDGVIDLMEFTRFCLEIPSMAWKAERARR---GIVSGA-----DREL--DKAARDMANEALNNTASGLDSIAGGDGGLSAAAAAESKEPKVSLGRTVFRGEKFFWRTKYLIEVVVQLNAKEGFMAV 168
            D +  G I+L EF R+CL+I +MAWKAER RR   G  SG      D E+  D+AA  MA E                    A A    ++P+  LG  ++ G K FWRT   + + +  N ++  +A+
Sbjct:  138 DTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEV-------------------AQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAI 247          
BLAST of mRNA_H-paniculata_contig17121.3976.1 vs. uniprot
Match: A0A7S1BFL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFL3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.660e-7
Identity = 42/142 (29.58%), Postives = 65/142 (45.77%), Query Frame = 0
Query:   18 DRQINDGSFKHGLSTLGFKLSEAA----MTEMYRKLDVNKDGVIDLMEFTRFCLEIPSMAWKAERARRGIVSGADRELDKAARDMANEALNNTASGLDSIAGGDGGLSAAAAAESKEPKVSLGRTVFRGEKFFWRTKYLIEV 155
            D  ++  SFK  +  L  K         +T++ +  D+N DG +  +EF  +CL IPS+AWKA + R   V G + EL K +  M   A + T      +       S    A S+   +  G  VFR  K +W+T   ++V
Sbjct:   16 DYYVSMESFKRSMVKLAMKFGGQIDFNELTKIAQHFDINNDGRVSKVEFKLYCLNIPSIAWKAAKKRMESVGGVN-ELRKLSEKMRPAARSRTEEATSRLKI-KRRRSLMIEAPSESDYIPCGPEVFRSTKLYWKTNTSVDV 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17121.3976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G5R3_ECTSI1.960e-4960.12EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSJ9_ECTSI7.980e-1332.88EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNE5_9STRA2.960e-1134.07EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D8LCP2_ECTSI9.660e-833.33EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S1BFL3_9STRA4.660e-729.58Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 16..73
e-value: 3.8E-9
score: 38.7
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 50..62
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 37..72
score: 11.305
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 17..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17121contigH-paniculata_contig17121:767..5145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17121.3976.1mRNA_H-paniculata_contig17121.3976.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17121 767..5145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17121.3976.1 ID=prot_H-paniculata_contig17121.3976.1|Name=mRNA_H-paniculata_contig17121.3976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
RSSLSRRSSSIEELTMRDRQINDGSFKHGLSTLGFKLSEAAMTEMYRKLD
VNKDGVIDLMEFTRFCLEIPSMAWKAERARRGIVSGADRELDKAARDMAN
EALNNTASGLDSIAGGDGGLSAAAAAESKEPKVSLGRTVFRGEKFFWRTK
YLIEVVVQLNAKEGFMAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair