Homology
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
D7G288_ECTSI (D-lactate dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G288_ECTSI)
HSP 1 Score: 159 bits (403), Expect = 2.350e-45
Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVHK 270
ELWR+RKEALWSL+GLYP+LEC+TTDVCVPVSRL+DLIG SK ELDAS LPAPIVAHAGDGNFHALIMFD+ NP V EA RLSSFMVHK
Sbjct: 276 ELWRQRKEALWSLMGLYPELECMTTDVCVPVSRLSDLIGQSKRELDASRLPAPIVAHAGDGNFHALIMFDRTNPADVAEADRLSSFMVHK 365
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
A0A0K9R847_SPIOL (FAD-binding PCMH-type domain-containing protein (Fragment) n=5 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9R847_SPIOL)
HSP 1 Score: 119 bits (298), Expect = 1.040e-30
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMV 264
ELW+ RKEALW+ + P E +TTDVCVP+S+LA+LI SK LDASPL +VAHAGDGNFH LI+FD NN +H EA RL+ FMV
Sbjct: 180 ELWKMRKEALWACFAMEPSFEAMTTDVCVPLSQLAELISKSKEVLDASPLTCTVVAHAGDGNFHTLILFDPNNEEHRQEAERLNHFMV 267
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
A0A540NII5_MALBA (FAD-oxidase_C domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NII5_MALBA)
HSP 1 Score: 114 bits (285), Expect = 1.310e-30
Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P+ E + +DVCVP+S LA+LI SK++LDAS L ++AHAGDGNFH +I+FD NN +H EA RL+ FMVH
Sbjct: 47 ELWKIRKEALWACFAMEPNFEAMISDVCVPLSCLAELISRSKVQLDASELVCTVIAHAGDGNFHTVILFDPNNEEHRREAERLNHFMVH 135
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
UPI000B78B9A0 (D-lactate dehydrogenase [cytochrome], mitochondrial-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78B9A0)
HSP 1 Score: 116 bits (291), Expect = 1.820e-30
Identity = 53/89 (59.55%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P+ E + +DVCVP+SRLA+LI SK ELDASPL ++AHAGDGNFH +I+FD N K EA RL+ FMVH
Sbjct: 93 ELWKIRKEALWACFAMEPNYEAMISDVCVPLSRLAELISKSKKELDASPLVCTVIAHAGDGNFHTVILFDPNQEKQRQEAERLNQFMVH 181
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
S8EAM9_9LAMI (FAD-binding PCMH-type domain-containing protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EAM9_9LAMI)
HSP 1 Score: 121 bits (303), Expect = 3.240e-30
Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ L PD E + TDVCVP+SRLADL+ SK +LDASPL ++AHAGDGNFH +I+FD ++ K +EA RLS FMVH
Sbjct: 426 ELWKIRKEALWACFALKPDCEAMITDVCVPLSRLADLVSASKKQLDASPLVCTVIAHAGDGNFHTVILFDPSDVKQREEAERLSHFMVH 514
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
UPI001CC3CF42 (D-lactate dehydrogenase [cytochrome], mitochondrial-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3CF42)
HSP 1 Score: 120 bits (300), Expect = 8.230e-30
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P E + +DVCVP+SRLA+LI SK ELDASPL +VAHAGDGNFH LI+FD NN +H EA RL+ FMVH
Sbjct: 421 ELWKIRKEALWACFAMEPGFEAMISDVCVPLSRLAELISRSKEELDASPLVCVVVAHAGDGNFHTLILFDPNNEEHKREAERLNHFMVH 509
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
A0A6U4CM34_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CM34_9STRA)
HSP 1 Score: 119 bits (298), Expect = 1.170e-29
Identity = 57/87 (65.52%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 4 LWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMV 264
+WRERKEALW YP+ TDV PVSRLADLI V K ELDASPLPAPI AHAGDGNFH +IM D N + EA RLS+FMV
Sbjct: 360 IWRERKEALWHCFAAYPEKTAFITDVIAPVSRLADLISVCKPELDASPLPAPICAHAGDGNFHTVIMIDPGNEAELHEAERLSAFMV 446
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
A0A4D9B6J5_SALSN (D-lactate dehydrogenase (Cytochrome) n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9B6J5_SALSN)
HSP 1 Score: 114 bits (285), Expect = 3.140e-29
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P+ E L TDVCVP+SRLA++I SK +LDASPL ++AHAGDGNFH +I+FD N + EA RL+ FMVH
Sbjct: 128 ELWKIRKEALWACFAMEPNSEALITDVCVPLSRLAEIISTSKKQLDASPLVCTVLAHAGDGNFHCVILFDPNKEEQRKEAERLNRFMVH 216
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
A0A843UNM9_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UNM9_COLES)
HSP 1 Score: 115 bits (287), Expect = 3.190e-29
Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELWR RKEALW+ + P E + TDVCVP+S LA+ I +SK ELDASPL ++AHAGDGNFH +I+FD NN EA RL+ FMVH
Sbjct: 110 ELWRIRKEALWACFAMEPGFEAMITDVCVPLSHLAECISLSKKELDASPLVCMVIAHAGDGNFHTVILFDPNNEDQRHEAERLNHFMVH 198
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match:
UPI000B8C804E (D-lactate dehydrogenase [cytochrome], mitochondrial-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C804E)
HSP 1 Score: 112 bits (279), Expect = 3.520e-29
Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMV 264
E+W+ RKEALW+ + P+ E + +DVCVP+S LA+LI SK ELDAS L ++AHAGDGNFH +I+FD NN +H EA RL+ FMV
Sbjct: 45 EIWKIRKEALWACFAMEPNFEAMISDVCVPLSHLAELISSSKQELDASSLVCTVIAHAGDGNFHTVILFDPNNEEHRKEAERLNQFMV 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.35e-45 / Id = 84.44 Expect = 1.04e-30 / Id = 62.50 Expect = 1.31e-30 / Id = 57.30 Expect = 1.82e-30 / Id = 59.55 Expect = 3.24e-30 / Id = 61.80 Expect = 8.23e-30 / Id = 62.92 Expect = 1.17e-29 / Id = 65.52 Expect = 3.14e-29 / Id = 58.43 Expect = 3.19e-29 / Id = 59.55 Expect = 3.52e-29 / Id = 56.82 Sequence D7G288_ECTSI A0A0K9R847_SPIOL A0A540NII5_MALBA UPI000B78B9A0 S8EAM9_9LAMI UPI001CC3CF42 A0A6U4CM34_9STRA A0A4D9B6J5_SALSN A0A843UNM9_COLES UPI000B8C804E Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 159.8 Seed ortholog evalue 5.8e-37 Seed eggNOG ortholog 2880.D7G288 Preferred name DLD1 KEGG rclass RC00044 KEGG ko ko:K00102 KEGG Reaction R00197 KEGG Pathway ko00620,map00620 Hectar predicted targeting category other localisation GOs GO:0000166,GO:0003674,GO:0003824,GO:0003973,GO:0004457,GO:0004458,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006081,GO:0006082,GO:0006089,GO:0008144,GO:0008150,GO:0008152,GO:0008720,GO:0008891,GO:0009056,GO:0009438,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016898,GO:0016899,GO:0017076,GO:0019154,GO:0019752,GO:0019866,GO:0030554,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0042180,GO:0042182,GO:0042802,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046185,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0051596,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901575,GO:1901615,GO:1901616,GO:1903457 EggNOG free text desc. cytokinin dehydrogenase activity EggNOG OGs COG0277@1,KOG1231@2759 Ec32 ortholog description FAD-binding, type 2, subdomain 1 Ec32 ortholog Ec-16_002060.1 EC 1.1.2.4 COG Functional cat. C BiGG Reaction iMM904.YDL174C,iND750.YDL174C Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000 Exons 2 Model size 270 Cds size 270 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10607.395.1
>prot_H-paniculata_contig10607.395.1 ID=prot_H-paniculata_contig10607.395.1|Name=mRNA_H-paniculata_contig10607.395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPL back to top mRNA from alignment at H-paniculata_contig10607:4729..5844-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10607.395.1 ID=mRNA_H-paniculata_contig10607.395.1|Name=mRNA_H-paniculata_contig10607.395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig10607:4729..5844- (Halopteris paniculata Hal_grac_a_UBK monoicous)GAGCTGTGGCGAGAAAGGAAGGAGGCATTGTGGTCGCTGATTGGACTTTA
CCCCGATCTGGAGTGCCTCACCACGGACGTGTGCGTGCCAGTGTCTAGGC
TGGCCGATCTGATCGGCGTCAGCAAGATAGAACTGGACGCATCCCCGTTG
CCCGCGCCGATCGTTGCCCACGCG GTAAGATCTGCTAAAGGCTATAGATA
CTTCGCAAATCAGTGACATGGTCAAACTTGTGTGGTTTTTCATATTACGG
CGAAGAGTTTGTATTGGTTAGTTCACCACCGAATTCTCCACCCGGCAAGT
TTTACATCGTGAATGATATGGCGCCTTGTTTTCTTTATAATTCTATATCT
TAGCTCTCGCCTATGAGCGCGTAATATGTATATTTCGCTTGTGTAACTGT
TCGATTTGAAACAGTACAGCAAGCAGGGCGGGGGAAATGTACGGGTTTTT
GTGAACTCTGCTCTCTCTCGTCTTTCGCGTGTACTTCAGCTGCGGTGGTT
TTGCATGCTTCTTGTTTTTCGTCCTTTGAACTACTGAAATAATTTTTTGG
TAAGCTTTGAATGCCTTTTGCGTACAGTAGGCTGAATTCCGTGCAGCTCT
CCGTAGTAATGTCGGGCACTCGGAACACCTGTAGCTCAAAAATGCTTTGT
GAGTATGCGAAATCTTGACATGAGAAACTTCATCATGCGCATCACAATTG
GAACTTTTTTCGGGGTTCCTTGTTTCATCGACAGCCTCTCTGGTACCAGA
TCGGTGGCGACTCAGCGGAGTGCAAAAATCAGCTACGTGGCGGATTGGCT
TAGAGTCGGTCAAAGCTCCAAGAAATTGTAGCAATCACACCTGCGCTGTC
GTCTCAATCTTAACCTCGCTGCTTGGCTTGTGGGATGCAGCCTGACGCGA
TCTTCTTTTTTTGTTTTGTCCTTTGCGTACTCTTTCACGTTCCCGCATAC
TTTTTCGTTATGTTCCTCTCTCTGTCGTTCCCTTTCGTTCTCTCTCTCTC
CATCGGTTTTGATAAAAAAGGGTGACGGAAATTTCCATGCATTGATAATG
TTCGACAAGAACAACCCTAAGCACGTCGACGAGGCACACCGTTTAAGCTC
CTTCATGGTACACAAG back to top Coding sequence (CDS) from alignment at H-paniculata_contig10607:4729..5844-
>mRNA_H-paniculata_contig10607.395.1 ID=mRNA_H-paniculata_contig10607.395.1|Name=mRNA_H-paniculata_contig10607.395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig10607:4729..5844- (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top