mRNA_H-paniculata_contig16972.3903.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS) HSP 1 Score: 477 bits (1227), Expect = 3.440e-146 Identity = 325/967 (33.61%), Postives = 494/967 (51.09%), Query Frame = 1
Query: 34 LLHERLGHVRD--LHTIAQQQGIK------FHGKLGVCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPV-DKSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDE-----------------EDFVTGHRGQQEHDGTREMEDICSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAIS---RDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAG-SREKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGPE---GFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGL 2787
L H+RLGH+ + ++ +++ + +G G+C C RGK +++ + K + L+LVHTDI GP+ S G+ + I F+ DYSR + L +KSE LRA K+F+ + GL + LRSD+GG++ F + ENGIK+ ++AAYTPQQNG+AER S+ M R M+ +++ RR+W EA + V+ LNR+P+ TP E+W P ++H+RV GC+AY + ++R KLD+K+ VF+G K++ +YR+YNPE K + +SR+VRFDE E+ +T + E E + V P + QA + T D+T A++ T GR+R +D + AGE V D A T +D F EAV ++EKWR M+ E G++ N T E + A K I KWIFK K E G +KARLVA+G+ Q +G D E AP+AR T+ + AA++ +++ +++ +A+L+ +EE++ V +LRK+LYGL+Q+ R W ++ + G + + L+ + E L+V++YVDDL+ G S E +EFK ++++ F M DLG + LG++V +D I I+ Y E+L+++G + V P+ K+S E + + ++P T ++ ++GSL Y T TRPD Y V+ +R ME P E KRI RY+ D GI + +G E GFVD D A + +DRKS +GY F ++GGAISW S+K +VT S+TEAE+VAA + V+L + L IR T DN S I L+K H R+KHI VR+H +R+ + EG + L Y T D LAD +TK +
Sbjct: 437 LWHKRLGHLSHSGMQSLVEKKMVNGLPQLSHNGDGGLCDICMRGKQNRENIPKKSSWRASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDESRKWDWEESALDDGVRWEEALTNSEAGDSGENNGEEETLNQPEEVDPENVNAPTEVTQA--ETTTDQTVAARE-----------------TSGRQRQTPVWMKDYVSGTAGEASFFVIDDDEALMMYTT------------------------AEDPDTFEEAV---------------KSEKWRKAMEAEIGSIEENQTWELVEP---PAEAKVIGVKWIFKTKFNEKGEVDKFKARLVAKGYHQRQGVDFHEVFAPVARWDTIRAILAKAAQNSWKVYQLDVKSAFLHGNLEEDVYIEQPLGFEVAGEAEKVYKLRKALYGLRQAPRAWYSRIEGYFEKEGFAKCYCEHTLFVKTEK--EKILIVSLYVDDLIYTGNSVELLEEFKASMMREFSMTDLGLMKFFLGVEVVQDGYG--IFINQQKYAVEILEKFGMENSNSVRNPIVPGQKLSK-EGSGETADP-----TTFKQLIGSLRYL-TATRPDLIYSVNLVSRFMEKPYEEHMLAAKRILRYVKGTTDFGIRY----KHNGEEKLVGFVDSDYAGDSDDRKSTSGYVFMMSGGAISWASKKQAIVTLSTTEAEFVAAAYGACQGVWLRNVLEEIRATQTEGTILYCDNSSTIKLSKNPVMHGRSKHIHVRYHFLRDLVNEGTIQLDYCPTQDQLADFMTKAV 1327
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A0K8WJW9_BACLA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8WJW9_BACLA) HSP 1 Score: 472 bits (1215), Expect = 1.040e-145 Identity = 315/947 (33.26%), Postives = 473/947 (49.95%), Query Frame = 1
Query: 28 IKLLHERLGHV--RDLHTIAQQQ---GIKFHG--KLGVCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVD-KSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDI-CSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEE----------------ELVRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVI-AGSREKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGPEGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGLS 2790
+ + H R GH+ ++L +++++ G+K G K C C + K P + E T + LELVHTD+ GP++ KS G F + F+ D+SR VY ++ KSEV + + F+ + +IK +RSD G ++ F F GIK+ ++ YTPQQNGVAER+ ++ EM +S +I NLG+ WAEA + VY NR PT+ N TP E W P + HLR+ G A+ + ++ + K D K +F+GY +YR+Y+ + + + R+V+F E +F T T E+ C+ T + EQ+ +N +R + + AS + + + E E + G T G+P R +H++ N P+S EAL G A +WR M+ E+ AL+ N T D L G+KAI +KW+++ K G+ +K+RLVA+G Q G + +ET +P+ R T+ +F +AAE + + ++I AYLN+ +EE E V +L+K++YGLKQSGR WN TLD L IG +R + CLY + ++ + +AVYVDDL+I S + E K I F+M D G +S LG++++R G I++ YIR V+ +G CR TP++ ++ DK N+TEY+ ++GSLMY + +RPD + V + +R DP E + K I RYLS D+ I + +GF D D A + DRKS TGY F L G + SW S K + SSTEAEYVA A E +YL L I + T DN S ++ + H RTKHI +++H IRE ++ + LKYV T ++ADILTK LS
Sbjct: 290 VTMWHNRYGHLNFKNLSELSEKELVHGMKLKGIPKQVNCDTCNKAKICALPFVQKTERSTKKVLELVHTDVCGPMNVKSLGGNRFFVTFIDDFSRKTFVYFMKAKSEVFKKFRNFKSFVECQMDCKIKAIRSDNGKEYINSEFDNFLKNCGIKRELTVPYTPQQNGVAERANRTIVEMAKSLLIHANLGQFLWAEAVQTAVYLRNRCPTKALNSRTPFEVWKQRKPSVKHLRIFGSRAFALDKTN-KGKFDAKGREYIFVGYSNTAKAYRLYDQQRRIIVERRDVKFIEGEFNTSI--------TSEISSSQCNGDFATNIIRLKSPENEQSATENVGEREMKNDFEDLNEEDEFATASDSEAEQSA-----------TSSEQDELPKRGRGRPKYIRT--------GQPGRPKKHFQLL--------NVNSTEDDETPQSPTEALSGQHAVEWRKSMQLEYDALIANNTWSLVD---LPKGQKAIGSKWVYRIKRDASGNINKFKSRLVAKGCGQQLGVNYWETFSPVIRYETIRMLFAIAAEKELYMHHIDISNAYLNSKLEENIFMKQPEGFISKKYPEKVLKLQKAIYGLKQSGRVWNTTLDAVLTSIGFKRCRHEPCLYVNNNN--QQYSYIAVYVDDLIIICPSENEIAEIKKKITAKFQMHDYGTVSDFLGLEIQRKGEKGAISLHQKKYIRAVIDSFGMQNCRATATPLDPGFQVGC---TDKNCVKV--NATEYQSLIGSLMYLAVLSRPDILHAVSKLSRHNTDPHIEHEAAAKHILRYLSGTIDMSIEYC--KTGEDVKGFADADWANDSSDRKSYTGYAFYLGGSSFSWSSTKQNITALSSTEAEYVALAMAAKEAIYLSRLLSEIGWSSSTPITLYGDNISAQHIARNPIHHKRTKHIDIKYHFIREKVENNEINLKYVSTDKNVADILTKSLS 1188
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A4Y1RID3_PRUDU (Toll-Interleukin-Resistance domain family protein n=7 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RID3_PRUDU) HSP 1 Score: 462 bits (1189), Expect = 3.810e-145 Identity = 306/938 (32.62%), Postives = 458/938 (48.83%), Query Frame = 1
Query: 40 HERLGHVRD-----LHTIAQQQGIKFHGKLGVCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVD-KSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICSTPPVTPA-VTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAGS-REKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGPEGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTK 2781
H+RLGH+ + +H+ + G++ G + +C C GK + + ERLELVH+D+ GP S G+H+ + F+ D+SR VY L+ KSEV K+++ + GL+IKRLR+D GG++ F +F E GI+ + TPQ NGVAER ++ E RS I L +++WAEA Y +NR P+ P P E W G KL HL+V GC+AYV Q R KLD K+ F+GY +D YRI++ ENK V SR+V F+E + + + T V + VT Q ++ ++SA Q + P+ P + R S V Y N+ G P+ EA + +A KW MK E +L+ N T E + L G+KA+H KW+++ K + DGS YKARLV +GF Q EG D + AP+ +++T+ +V + A D LE +++ A+L+ ++EE+ V RL+KSLYGLKQ+ R W D+F+ G ++ D C YF R +++ +YVDD+++AGS + K + + F MKDLG ++LG+Q+ RD+ G + +S YI VL+R+ + V TP+ +S +S E Y +GSLMYA TRPD + V +R M +P + + K I RYL + + FG +G+VD D ++ R+S TGY F + A+SW S+ ++VT S+TEAEYVA EA E ++L L + F + N D++S I+L K H RTKHIG+R+H IR +++ VL L+ +Q + AD+LTK
Sbjct: 3 HQRLGHMSEKGMKIMHSKGKLPGLESVG-IDMCEDCIFGKQKRVSFQTSGRTPKKERLELVHSDVWGPTTISSIGGKHYFVTFIDDHSRKVWVYFLKHKSEVFEVFKRWKAMVENETGLKIKRLRTDNGGEYEDTRFKKFCYEQGIRMERTVPGTPQHNGVAERMNRTLTERARSIRIQSGLPKQFWAEAVNTAAYLINRGPSVPLEHRIPEEVWSGKEIKLSHLKVFGCVAYVHISDQGRNKLDPKSKKCTFIGYGEDEFGYRIWDNENKKVIRSRDVIFNERMMYKDRHKNDTSNTEQSVPIFVDTDDVPDSLVTEPMVASPQ--LEELVGQSSAQQSDTLQPSTPAPV-------------LRRSSRPHVPNRRYM-------------------------------------------NYLLLTDGGEPECYDEACQTGDASKWELAMKDEMRSLISNQTWELAE---LPVGKKALHNKWVYRVKEEHDGSK-RYKARLVVKGFQQKEGVDYTDIFAPVVKLNTIRSVLSIVAIEDLYLEQLDVKTAFLHGDLDEEIYMHQPEGFSERGNKNMVCRLKKSLYGLKQAPRQWYKKFDSFMHKEGFQKCNADHCCYFKRYRSSY--IILLLYVDDMLVAGSDMDDIRRLKQQLSKEFDMKDLGPAKKILGMQITRDKHRGILQLSQTEYINRVLQRFNMGDAKPVSTPLASHFHLSKDQSPQTEEERDLMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLQGTSEKCLYFG--KGELKVQGYVDADFGGEVDHRRSTTGYIFTVGNTAVSWMSQLQKIVTLSTTEAEYVAVTEASKEMIWLQGLLTELGFKQEKNVLHS-DSQSAIHLAKNSAFHSRTKHIGLRYHFIRSLLEDEVLTLEKIQGSKNPADMLTK 872
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ) HSP 1 Score: 473 bits (1217), Expect = 3.940e-144 Identity = 335/949 (35.30%), Postives = 489/949 (51.53%), Query Frame = 1
Query: 40 HERLGHV--RDLHTIAQQQGIKFHGKLG----VCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVDKSFEG-RHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICS--TPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAV-----SKGMPKSTAEALKGPEAEK---WRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAGSREKT-DEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGP-EGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTK 2781
H R GH+ + L +AQ ++ + +C C GK + P + + + E LELVH D+ GP+ + G R + ++ V D SR + L K E A+KQF+ + +G +++ LR+D+GG+FT F + + G+++ ++A Y+PQQN V ER +V RS + L R+W EA A VY LNR+PT+ +G TP E WHG P ++HLRV GC+ YV RKLDD+ VF+GY++ + +YR+Y+P + V +SR+V FDE T E T E E PV P+V + GEQ T A P S P + N GE + + T E++G P R +V+D + TE V S +T E EAEK WR M E ++ N T + L AG KAI KW++K K G+ +KARLVA+G+ Q +G D E AP+ARM T+ + LAA+ +E+ M++ +A+LN +EEE+ V +LRK+LYGL+Q+ R WN LDN L+ + +S T+S +Y G++ L+V VYVDDL+I GS++K D FK + Q F M DLGFLS LG++V + I +S +Y ++L++ G + C P+E ++K+S E + +P TEYR +VGSL Y TRPD AY V +R ME P E ++ K I RY+S G +G + + GF D D+A +++DRKS TG F+ G ISW S+K ++V SS EAEY+AA A + ++L + + G TT + DNKS INL K H R+KHI R+H IRE +++ +A++YV + D LAD+LTK
Sbjct: 518 HARFGHLNFQSLRRLAQGNMVRGLPTIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDE--TATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADA---GEQ-----TGTPVQAGVSPVSTGVLSSPPRAPN-------------------GEFC------------TPPTSVTPETDGGP--------VRYRRVQDILSTTEPVLDFDYSDQCLIATEEPTSFVEAEKHECWRRAMVEELRSVEENQTWSLAE---LPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYVRGV--GDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGFLSYYLGMEVVQKGEG--IFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSK-EGTGECVDP-----TEYRSIVGSLRYL-VNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYISGTIKTGCWYGREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGSLISWQSQKQKVVALSSCEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCKNPVFHDRSKHIDTRYHFIRECVEKKQIAVEYVCSEDQLADLLTK 1403
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT) HSP 1 Score: 457 bits (1175), Expect = 3.640e-143 Identity = 303/920 (32.93%), Postives = 465/920 (50.54%), Query Frame = 1
Query: 121 CSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVDK-SFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVS--KGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLY---FSRDDGGEADLLVAVYVDDLV-IAGSREKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSG-NSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNS--HGPE--GFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGN--TTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGLS 2790
C AC R K + PV K +T + LEL+H+D+ GP++ S G + + F DY+R VY L+ KSEV +++ + GL++K LR+D GG++ F ++ GI S YTPQQNGV+ER ++ E +S + N+ +WAEA VY NR+PT N TP E W P + +L+V G + ++ S RRKLD ++ VF+GY + Y++Y+ E+K+ S++V F E F HD +++ + V + + + ED+ +P I +LPA GE YE + + V N T P++ S D N TE+++ P+S +EAL G A KW+ +K E+ +L+ N T E G I +KW+ K K DG+ +KARLVAQG+SQ G + E +P+AR S++ T+ LA +H+ E+ M++ A+LN +E ++ V +L+KSLYGLKQS R WN TLD+FL G +S D+C+Y + D+G + +++AVYVDD++ I+ + K + +HF M D G + +LG+ ++RDR T+ IS Y+ VL R+G C+ + TP+E + K +E + G + Y+ +G L Y ST TRPD + V + M +P +E + KR+ RY+ + G+ F N +G + G+ D + A +++ R+S +GY FK+ +SWCS+K VT S+TEAEYVA +A E +++ L I GCK TT DN+ I +K H RTKHI VR+H +RE + + + Y T LADI+TKGL+
Sbjct: 12 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFYANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYEVWFSKKPDVSNLKVFGSVCFIHTPSNLRRKLDPRSRKAVFIGYPLNTKGYKLYDIESKNFVRSKDVGFYENKF---------HDFKVVTKELI----IREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAV----------------------GESYE------ESFMKQVENLETKRQRKAPKKFS----------PDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSITNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLE--------TTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDISAAVSILSSYMSNPSKEHRNGVKRLLRYIKGTLNFGLKFTTSENDDENGDKLYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDI--GCKSEEPTTMYEDNQGAIESSKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLT 867
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A0V0T740_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0T740_9BILA) HSP 1 Score: 473 bits (1216), Expect = 3.870e-143 Identity = 325/959 (33.89%), Postives = 476/959 (49.64%), Query Frame = 1
Query: 40 HERLGHVRDLHTIAQQQGIKFHG------KLGVCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPV-DKSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQE--HDGTREMEDICSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGES-EGKPR-----RRSRH---YRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL------------------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAGSRE-KTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGPEGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGL 2787
H RLGH+ + + + K G KL VC C +GK ++ P K + ++ LEL+HTDI GP+ S G + + F+ DYS+ ++Y L+ ++EVL A F+ G +IK LRSD ++ E F +F NGI+ S YTPQQNGVAER ++ +++R ++ L +WAEA Y NR P++ NG P W+G L++ R G AYV+ +S + K ++ +F+GY ++ +YR++ P + V SR+V+F TG G E H T + ++ PA C K TE T L T + GT V E A VT T + G+PR RR R YR + GN PKS EAL E+++W MK E+ ALV N T E + + +K + +W++ K DGS KARLVA+GF Q D ET AP+AR+S++ T+ ++A + ++ +AYLN +EEE+ V R+RK+LYGLKQSGR W LD L GL+ ++ D C+YF R G + A+YVDD++IA ++ + +E K + + F MKD+G + LGI+++++ NG I +S YI ++L+R+ + V TP++ K+SA +E +T YR +VGSLMY S TRPD A+ V ++ E+ + ++ KR+ RYL G+ F + NS GF D D N +DR+S TGY FK AISW SRK + V SSTEAEY+A EA E ++L +G I CK + DN+S + L + H RTKHI +R+H IRE + + L+Y+ TG +AD+LTKGL
Sbjct: 612 HRRLGHLNERSLLELTRHEKVFGMKVGKEKLPVCEICIKGKQTQSPFPKNQAKRRCRPLELIHTDICGPMRQNSIGGSKYFVTFIDDYSQWCEIYFLKNRNEVLDAFMDFKSHAENQTGNKIKTLRSDNATEYCSENFQKFLRVNGIRHETSVQYTPQQNGVAERKNRTLLDISRCMLLESKLSLNFWAEAISTACYIRNRCPSKSLNGEIPLTLWNGRKLTLNYFRTFGEKAYVLDKSPGKGKFSTRSKECIFIGYSTESKAYRLWCPAERKVLRSRDVKF------TGKFGNDETLHQPTAQNQEW-------PA--------NDTCEKETE-------------TLELQ------LTTNESNDTHQSGGTLVQNE------------AEQVTETRKMKVLPGRPRLVRSGRRGRPKKVYRKEEVQPVTCGNVASIAEMNDPKSVTEALSCRESKEWLEAMKREYEALVKNNTWEIVNRPQR---QKVVACQWVYNTKFNADGSIKQRKARLVAKGFLQRPNIDFHETYAPVARLSSIRTILAISANYGLIAHQLDFVSAYLNGEIEEEIYMEIPEKLDEVLKCSKVKQNLDGKVCRIRKALYGLKQSGRQWYRKLDEKLSQYGLKATSGDPCVYFERR--GRELTIAAIYVDDVIIASNKNARLNELKKALAKSFEMKDMGPIHYCLGIEIKQNA-NGDIEMSQRKYIMDILERFRMMDSKTVETPIDASNKLSAEMCPRTETEKAEMQNTPYRSLVGSLMYLSVSTRPDIAFAVSLLSQFNENYGSQHWTAAKRVLRYLKKTASYGLRF--QRNSGALMGFSDADWGGNSDDRRSYTGYVFKFGNAAISWESRKQRTVALSSTEAEYMALSEACKEVIHLKQMIGEITGLCK-SVVLQSDNQSALKLARNPVFHARTKHIDIRYHFIREAAERKDVELRYLPTGQMVADVLTKGL 1509
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 466 bits (1198), Expect = 1.490e-142 Identity = 306/920 (33.26%), Postives = 466/920 (50.65%), Query Frame = 1
Query: 121 CSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVDK-SFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVS--KGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLY---FSRDDGGEADLLVAVYVDDLV-IAGSREKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSG-NSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNS--HGPE--GFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGN--TTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGLS 2790
C AC R K + PV K +T + LEL+H+D+ GP++ S G + + F DY+R VY L+ KSEV +++ + GL++K LR+D GG++ F ++ GI S YTPQQNGV+ER ++ E +S + N+ +WAEA VY NR+PT N TP E W P + +L+V G + ++ S RRKLD ++ VF+GY D Y++Y+ E+K+ S++V F E F HD +++ + V + + + ED+ +P I +LPA GE YE + + V N T P++ S D N TE+++ P+S +EAL G A KW+ +K E+ +L+ N T E G I +KW+ K K DG+ +KARLVAQG+SQ G D E +P+AR S++ T+ LA +H+ E+ M++ A+LN +E ++ V +L+KSLYGLKQS R WN TLD+FL G +S D+C+Y D+G + +++AVYVDD++ I+ + K + +HF M D G + +LG+ ++RDR T+ IS Y+ VL R+G C+ + TP+E + K +E + G + Y+ +G L Y ST TRPD + V + M +P +E ++ KR+ RY+ + G+ F N +G E G+ D + A +++ R+S +GY FK+ +SWCS+K VT S+TEAEYVA +A E +++ L I GCK TT DN+ I ++K H RTKHI VR+H +RE + + + Y T LADI+TKGL+
Sbjct: 409 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKF---------HDFKVVTKELI----IREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAV----------------------GESYE------ESFMKQVENLETKRQRKAPKKFS----------PDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLE--------TTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDI--GCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLT 1264
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A5B7BAK4_DAVIN (Uncharacterized protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BAK4_DAVIN) HSP 1 Score: 465 bits (1196), Expect = 4.340e-142 Identity = 308/945 (32.59%), Postives = 468/945 (49.52%), Query Frame = 1
Query: 25 DIKLLHERLGHVRD-----LHTIAQQQGIKFHGKLGVCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVD-KSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEE----------------LVRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAGSR-EKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGPEGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGLS 2790
D L H RLGH+ LH+ + QG+K + +C C GK K K E+LELVHTD+ GP S G + + F+ D +R VY L+ KS+V K+++ + GL+IK LRSD GG++T + F +F A NGI+ + TPQQNGVAER ++ E RS I L + +WA+A Y +NR P+ P + G P E W G L HL+V GC++YV S R KLD K+ F+GY D YR ++ +N+ + SR+V F+E+ G + ++ E P+ + +R V+N + Q+ P+ P L +S +S+ +Y + D G P+ EAL+ ++ KW + M+ E +L+ N T + + L G+KA+H KW+++ K + DGS YKARLV +GF Q EG D E +P+ +M+T+ V + A + LE +++ A+L+ +EE+ L+ +L KSLYGLKQ+ R W D F+ G R D C Y R D +++ +YVDD++IAGS ++ K+ + + F MKDLG ++LG+++ RDR GT+ +S Y++ V+ R+ + V TP+ +++ +S E Y VGSLMYA TRPD A+ V +R M +P ++ + K I RYL D + F +G+VD DLA ++++RKS TGY F L G A+SW SR ++V S+TEAEYVA EA E V+L FL + + N+ D++S I+L K H RTKHI +R+H IR + + VL+L+ ++ + AD+LTK ++
Sbjct: 414 DSNLWHYRLGHMSQKGMKVLHSKGKLQGLKSVD-IDLCEDCIFGKQKKVSFSKAGRTPKAEKLELVHTDVWGPSPVSSLGGSSYYVTFIDDSTRKVWVYFLKSKSDVFSTFKKWKAMVENETGLKIKCLRSDNGGEYTDKEFKEFCATNGIRMEKTIPKTPQQNGVAERMNRTLNERGRSMRIHAGLPKMFWADAVNTAAYLINRGPSVPLDDGLPEEAWSGKEVNLSHLKVFGCVSYVHIDSDARSKLDPKSKKCTFIGYGTDEFGYRFWDDQNRKITRSRDVIFNEKVLYKDRSGAESNNADTHAEKTGFVELEEPSESEVHSR-----VQNNPENI-IPQVEPVTPATGLRRSS----------RVSKAPQCYSPSLYYLLLSDS----------------------------------------------GEPECYDEALQVGDSAKWESAMQDEMDSLMSNQTWKLTE---LPKGKKALHNKWVYRIKEEHDGSK-RYKARLVVKGFQQKEGVDYTEIFSPVVKMTTIRLVLGIVAAENLHLEQLDVKTAFLHGDLEEDIYMKQPQGFTAPGKEGLICKLAKSLYGLKQAPRQWYKKFDGFMCTNGFTRCQADHCCYMKRFDNDY--IILLLYVDDMLIAGSSIQEIKNLKNQLSKQFAMKDLGAAKQILGMRISRDRTAGTLKLSQAEYVKRVISRFSMQDAKPVSTPLASHFRLTKDQSPKTEEEQGYMQRVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKKHWEAIKWILRYLKGTTDTALCFDEADMVL--QGYVDSDLAGDVDNRKSTTGYVFTLGGTAVSWVSRLQKIVALSTTEAEYVAVTEASKEMVWLQSFLEELGKKWE-NSVLYSDSQSAIHLAKNSAFHSRTKHIQLRYHFIRSLLDDKVLSLEKIRGSQNPADMLTKAVT 1286
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH) HSP 1 Score: 464 bits (1193), Expect = 2.180e-141 Identity = 313/950 (32.95%), Postives = 494/950 (52.00%), Query Frame = 1
Query: 40 HERLGHV--RDLHTIAQQQGIKFHGKL------GVCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVDK-SFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICSTPPVTPAVTRSRARGEQACVKNTEDRTSASQMPPILPTYS------LPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAGSR-EKTDEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF--GGKSNSHGPEGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGL 2787
H+R GH+ + L ++A+++ +K K VC C +GK ++ + K ++ + L+LVHTDI GP++ S G+ + + F+ D+SR Y L +KSE + K+F+ ++ + +G ++ LRSD+GG++ F ++ E GIK+ ++AAYTPQQNGVAER SV MTR ++ +++ R++W EA + VY LNR+P++ N TP EKW P ++HLR+ G +AY + Q+R KLD+K+ V G K++ +YR+Y+P + +SR+V+FDEE RG + D + E E + PA GE+ N + + T + LPA + ++ +D V G ARV +D + A+ G P + + E WR M+ E ++ N T E + L K I KWIFK K E G +KARLVA+G+ Q G D +E AP+A+ T+ + LAAE + + +++ +A+L+ ++E++ V +L+K+LYGLKQ+ R W ++ F G E+ + L+ ++ L+V+VYVDDL+ GS E + FK+++++ F M DLG + LG++V +D I I+ Y E++K+YG + C V P+ K++ + D + + TE++ ++GSL Y +T TRPD + V+ +R ME P + KRI RY+ DLGI + GG + G FVD D A +++DRKS +GY F L GGAI+W S+K +VT S+TEAE+V+A + V+L + L I +G T DN S I L+K H R+KHI VR+H +RE ++EG + L Y T D +ADI+TK +
Sbjct: 436 HKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEE------RGWEWEDKSLEEELVWDNSDHEPA-------GEEGPEINHNGQQDQEETXXXXETVAETVHQNLPAVGTGGVRQRQQPVWMKDY---VVGN------------------------------------ARVLITQDEEDEVLALFIG-PDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVE---LPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDF--LVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERG--IFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGD------AVDPTEFKQLIGSLRYLTT-TRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVG---FVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAV 1315
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 460 bits (1183), Expect = 6.510e-141 Identity = 307/946 (32.45%), Postives = 477/946 (50.42%), Query Frame = 1
Query: 25 DIKLLHERLGHV--RDLHTIAQQQGIKFHGKLG----VCSACERGKASKQPVKKYREEQTMERLELVHTDIAGPVD-KSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRALKQFERDIAKANGLQIKRLRSDQGGQFTGEVFHQFYAENGIKQNVSAAYTPQQNGVAERSWLSVFEMTRSKMITVNLGRRYWAEAARAPVYCLNRAPTRPQNGGTPCEKWHGSIPKLDHLRVVGCMAYVMFQSQQRRKLDDKAWAEVFLGYDKDNPSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQQEHDGTREMEDICSTPPVTPAVTRSRARGEQACVKNT-EDRTSASQMPPILPTYSLPAASANPFTRGRRRAISRDSGTRVAGEHYEAVRDGSAASARSVTNTNTGESEGKPRRRSRHYRARVAKVKDTGNFTEAVSKGMPKSTAEALKGPEAEKWRAEMKGEWGALVGNGTRESEDTGRLSAGRKAIHTKWIFKRKLKEDGSAAHYKARLVAQGFSQVEGEDLFETSAPIARMSTLHTVFRLAAEHDFELEGMNIDAAYLNAPVEEEL----------------VRRLRKSLYGLKQSGRNWNDTLDNFLVGIGLERSTTDSCLYFSRDDGGEADLLVAVYVDDLVIAGSREKT-DEFKHNIIQHFRMKDLGFLSRVLGIQVRRDRPNGTIAIS*VSYIREVLKRYGFDQCRGVPTPVEGKVKISAPESADKPSEPKSGNSTEYRGMVGSLMYASTETRPDTAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNSHGPEGFVDVDLAENIEDRKSITGYFFKLNGGAISWCSRK*QLVTWSSTEAEYVAAGEAGNETVYLGDFLGSIRFGCKGNTTFV*DNKSVINLTKGYGTHCRTKHIGVRWHGIREWIQEGVLALKYVQTGDHLADILTKGL 2787
D L H R GH+ L +++ +K ++ +C AC +GK +Q K R + LE+VHTDIAGP D S G + + F+ D+SR +Y L++KSE L LK+F+ K +G +K LRSD+GG++T ++F +F E+GI ++A YTPQQNGVAER ++ +M RS + L R +WAEA R VY LNR PT+ TP E W G P + H ++ GC+AY R+KLDD+ +F+GYD+ + +YR+YNP K + +SR+V FDE D+ R +E +++E + + + +Q +N +S+S I+ P TR RR E Y + + + N+ D + EAV E +KWR M E ++ N T E R G I KW++K K+ ++G+ YKARLV +G+ Q +G D E AP+AR+ T+ + +A + +++ M++ +A+LN +EEE+ V RL+K+LYGLKQ+ R WN +D + G +S + LY +++ G+ ++V +YVDD++ G+ ++FK + + F M D+G +S LG++V++ + I Y E+L+++ + C+ V TP E VK+S + ++ N T ++ +VGSL Y T TRPD Y V +R ME P ++ +S KRI RY+ G+ + NS G+ D D +++D+KS TGY F + SW S+K Q V S+ EAEY+AA + ++L + L + + TT DNKS I+L K +H R+ HI ++H IRE ++ + L Y +T D LADI TK L
Sbjct: 327 DSWLWHLRYGHLGFSGLKLLSKTSMVKGLPEINPPNQLCEACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYW---RWSEEE---KKVEGLFFEDKDGDLINQDEQADDQDPRQNLPSSSSSSSDASNIIEDPEAPPTELQRSTRERRMP-----------ERYNDYELNNVSLFCLLVNS------------------------DPITYEEAV---------------EDDKWRNAMDEEIASIERNDTWELT---RQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVATQKGWKIYQMDVKSAFLNGYLEEEVYIEQPPGYIRKGHEDKVYRLKKALYGLKQAPRAWNTRIDEYFQRNGFMKSPYEHALYTKKNEDGDI-MIVCLYVDDMIFTGNNPGMFNDFKKAMTKEFEMTDIGEMSYFLGVEVKQMQEGIFIT---KKYAEEILRKFRMEDCKPVATPAEPGVKLSVNSTREQV------NPTLFKSIVGSLRYL-TITRPDITYAVGLVSRFMEHPKQDHWSAAKRILRYVKGTTGHGLFYMHSENSK-LVGYSDSDYGGDLDDQKSTTGYLFHIGSAVFSWSSKKQQTVALSTCEAEYIAAAACTCQAMWLRNILNELNLAQEEPTTIYVDNKSTISLAKNPVSHSRSNHIDTKYHFIREQVKNKNVELIYCRTEDQLADIFTKPL 1201 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16972.3903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16972.3903.1 >prot_H-paniculata_contig16972.3903.1 ID=prot_H-paniculata_contig16972.3903.1|Name=mRNA_H-paniculata_contig16972.3903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=615bp MERLELVHTDIAGPVDKSFEGRHFAIIFVRDYSRMRKVYALRKKSEVLRAback to top mRNA from alignment at H-paniculata_contig16972:2550..5512- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16972.3903.1 ID=mRNA_H-paniculata_contig16972.3903.1|Name=mRNA_H-paniculata_contig16972.3903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2963bp|location=Sequence derived from alignment at H-paniculata_contig16972:2550..5512- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16972:2550..5512- >mRNA_H-paniculata_contig16972.3903.1 ID=mRNA_H-paniculata_contig16972.3903.1|Name=mRNA_H-paniculata_contig16972.3903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3690bp|location=Sequence derived from alignment at H-paniculata_contig16972:2550..5512- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |