prot_H-paniculata_contig10590.386.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10590.386.1
Unique Nameprot_H-paniculata_contig10590.386.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A8M8USE7_SESIN (uncharacterized protein LOC110012095 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8USE7_SESIN)

HSP 1 Score: 93.2 bits (230), Expect = 2.250e-20
Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQHFPGAVGKLNKAIYGLVQA 105
            ++K K+  DG LE+ K RLVA+G+ QIEG +Y++ ++P     ++R  L  AA K   L+HFD  +AFL   +DE +Y+E PE +Q   G V KLNK++YGL QA
Sbjct:   21 IYKTKLKPDGTLERCKARLVAKGYSQIEGEEYSDCFAPVAMAVTVRAFLAIAAGKGWSLQHFDVNNAFLHGRLDEDIYMEAPEAYQIPEGKVCKLNKSLYGLKQA 125          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 94.0 bits (232), Expect = 3.540e-20
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    4 KCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQHFPGAVGKLNKAIYGLVQA 105
            K K   DG +EK K RLVA+GF Q+EG+DYT+ ++P    ASIR +L  AA+ D ++   D + AFL  D+DE +Y+  P  F H  G+V +L K++YGL QA
Sbjct: 1040 KIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQA 1142          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A164J190_9CRUS (Putative Copia protein (Gag-int-pol protein) (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164J190_9CRUS)

HSP 1 Score: 89.4 bits (220), Expect = 1.430e-19
Identity = 49/107 (45.79%), Postives = 72/107 (67.29%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADI-DEMYIEIPERFQHF--PGAVGKLNKAIYGLVQA 105
            ++K K S DGK+E+ K RLVA+GF Q EG+DY+E Y+P     S+R++++ AA K+ E+   D + AFL  D+ +E+Y+E PE F+    P  V +L K+IYGL QA
Sbjct:   11 VYKVKYSTDGKIERFKARLVAKGFSQKEGIDYSETYAPVVRHESLRMVISIAAAKNLEILQLDVKTAFLHGDLKEELYMEQPEGFEDTSRPSDVCRLLKSIYGLKQA 117          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 92.0 bits (227), Expect = 1.680e-19
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    4 KCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQHFPGAVGKLNKAIYGLVQA 105
            K K   DG++EK K RLVAQGF Q+EG+DY E ++P   + SIR+LL  AA  D E+   D + AFL  +++E +Y+++P   +    AV +L KA+YGL QA
Sbjct: 1046 KTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQA 1148          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 91.3 bits (225), Expect = 3.120e-19
Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 0
Query:   10 DGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQHFPGAVGKLNKAIYGLVQA 105
            DGK++K K RLVA+GF Q+EGVDYT+ ++P    ASIR+LL  AA  D E+   D + AFL  D++E +++E P  FQ     V +L K++YGL QA
Sbjct: 1021 DGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLYGLKQA 1117          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A3S3PZ35_9MAGN (Zinc finger, CCCH-type n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3PZ35_9MAGN)

HSP 1 Score: 90.9 bits (224), Expect = 4.260e-19
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQH--FPGAVGKLNKAIYGLVQA 105
            ++K K+  DG LE+ K RLVA+GF Q+EG+D++E +SP    A+IRI+LT A   + ++R  D ++AFL   + E +++E P RF H  +P  V  L KA+YGL QA
Sbjct: 1035 VYKTKLRADGSLERLKARLVAKGFNQVEGIDFSETFSPVVKPATIRIVLTIALAHNWDIRQLDVKNAFLNGHLHENVFMEQPPRFAHPVYPHHVCHLKKALYGLRQA 1141          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 89.7 bits (221), Expect = 1.020e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQHF-PGAVGKLNKAIYGLVQA 105
            ++K K + DG +E+ K RLVAQGF QIEG+DY E +SP     S+R  L  A  K  EL   D  +AFL  D++E +Y+++PE F+      V KL K++YGL QA
Sbjct:  130 IYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQA 235          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A2N9GB87_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GB87_FAGSY)

HSP 1 Score: 89.4 bits (220), Expect = 1.490e-18
Identity = 48/107 (44.86%), Postives = 72/107 (67.29%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERF--QHFPGAVGKLNKAIYGLVQA 105
            ++K K+  DG LE+ K RLVA+GF Q++GVD++E +SP    ASIR+ LT AAVK  E+R  D ++AFL   + + +Y++ P  +    FP  V +L++A+YGL QA
Sbjct: 1047 VYKAKLKPDGSLERLKARLVAKGFSQVDGVDFSETFSPVIKPASIRLALTIAAVKGWEIRQLDVKNAFLHGYLSQPVYMQQPPGYVDSQFPTHVCQLSRALYGLKQA 1153          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A251TUQ9_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TUQ9_HELAN)

HSP 1 Score: 88.6 bits (218), Expect = 2.750e-18
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERF--QHFPGAVGKLNKAIYGLVQA 105
            L + K   DG +E++K RLVAQGF Q  G+DY+  +SP    +++RI+L+ A + D  L   D  +AFL   ++E +Y+E P  F   +FP  V KLNKA+YGL QA
Sbjct:  917 LFRTKYHSDGSVERHKARLVAQGFSQFPGIDYSHTFSPVVKASTVRIILSLAILNDWRLHQLDVNNAFLHGHLNECVYMEQPPGFINPNFPNHVCKLNKALYGLKQA 1023          
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Match: A0A5N6M6S4_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M6S4_9ASTR)

HSP 1 Score: 88.2 bits (217), Expect = 3.670e-18
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    2 LHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILLTTAAVKDGELRHFDAEHAFLKADIDE-MYIEIPERFQHFPGAVGK---LNKAIYGLVQA 105
            + K K+  DG ++K K RLV +GFRQ EGVDY + YSP     SIR++LT AA+++ E+   D + AFL  D++E +Y+E PE F   PG  GK   L K++YGL QA
Sbjct:  771 IFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLTIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSA-PGQEGKVCKLVKSLYGLKQA 877          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10590.386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8M8USE7_SESIN2.250e-2045.71uncharacterized protein LOC110012095 n=1 Tax=Sesam... [more]
A0A1M2VV58_TRAPU3.540e-2046.60Retrovirus-related Pol polyprotein from transposon... [more]
A0A164J190_9CRUS1.430e-1945.79Putative Copia protein (Gag-int-pol protein) (Frag... [more]
A0A0C2WN23_AMAMK1.680e-1945.63Integrase catalytic domain-containing protein (Fra... [more]
A0A060SSE0_PYCCI3.120e-1948.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A3S3PZ35_9MAGN4.260e-1944.86Zinc finger, CCCH-type n=1 Tax=Cinnamomum micranth... [more]
A0A438GNV2_VITVI1.020e-1845.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9GB87_FAGSY1.490e-1844.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A251TUQ9_HELAN2.750e-1843.93Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A5N6M6S4_9ASTR3.670e-1847.22Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..105
e-value: 3.0E-20
score: 72.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..105
NoneNo IPR availablePANTHERPTHR11439:SF287coord: 4..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10590contigH-paniculata_contig10590:2952..3266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10590.386.1mRNA_H-paniculata_contig10590.386.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10590 2940..3266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10590.386.1 ID=prot_H-paniculata_contig10590.386.1|Name=mRNA_H-paniculata_contig10590.386.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MLHKCKVSKDGKLEKNKCRLVAQGFRQIEGVDYTEKYSPTPATASIRILL
TTAAVKDGELRHFDAEHAFLKADIDEMYIEIPERFQHFPGAVGKLNKAIY
GLVQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like