prot_H-paniculata_contig1689.3855.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1689.3855.1 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI) HSP 1 Score: 125 bits (314), Expect = 3.540e-32 Identity = 71/141 (50.35%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 74 LSPGKFARRMSEELGLPPTFMQPIARSISRQLLDSERVLNRWA-ERTAGPVTESVRRIDIDVRFRSIIYRDHLQWDVNCLSNSAELFARCTVADLALPQEMEPAIAFTIQQQLVDHRVEAARPDGSMRTLQTKATLSPHLS 213
LSP +F+RR ELG+ +F+QPIA+SI +QL++ R WA E T P E+++ + IDVRFRS+I+RD LQWDVNC NS E FAR TVADL LPQEMEP IA T QQ+ R+ A + Q K P +S
Sbjct: 39 LSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFKDVEGPCVS 179
BLAST of mRNA_H-paniculata_contig1689.3855.1 vs. uniprot
Match: A0A835YTF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF3_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.280e-17 Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 0
Query: 74 LSPGKFARRMSEELGLPPTFMQPIARSISRQLLDSERVLNRWAERTAG----PVTESVRRIDIDVRFRSIIYRDHLQWDVNCLSNSAELFARCTVADLALPQEMEPAIAFTIQQQLVDHR 189
LSP FA + +L LP P+AR+I Q++ ++ L W+ + P E++ I++++R +++YRD +WD+N NS E FA TVADLALPQ MEPAIA +++QL ++R
Sbjct: 530 LSPEAFAAATAADLALPRKLEAPLARAIRAQVVTAQATLPVWSGSSGAAAMYPAGEALVPIELELRLGAVLYRDKFEWDMNEPLNSPEAFAARTVADLALPQPMEPAIALALREQLANYR 649
BLAST of mRNA_H-paniculata_contig1689.3855.1 vs. uniprot
Match: A0A0P1AIR2_PLAHL (SWI-SNF chromatin remodeling complex, Snf5 subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIR2_PLAHL) HSP 1 Score: 56.6 bits (135), Expect = 1.160e-5 Identity = 50/177 (28.25%), Postives = 80/177 (45.20%), Query Frame = 0
Query: 68 DRFLLQLSPGKFARRMSEELGLPPTFMQPIARSISRQLL--DSERVLNRWAERTAGPVTESVRRIDIDVRFRSIIYRDHLQWDVNCLSNSAELFARCTVADLALPQEMEPAIAFTIQQQLVDHRVEAARPDG-SMRTLQTKATLSP-------HLSHVQPVDQYEFNTRDWRDHRPL 234
D + SP A ++ + + IA SI RQ+L S V+N P+ +D+ V S+ RD +WDV+ + ++FA ADL LPQ EPAI F+I +Q+V +R+ + D L K T S ++ + P+D +T D + +P+
Sbjct: 207 DAAIASCSPELLAMQIFHDEKMTDRLRDAIAESIRRQILLFTSSSVINLHKNTLLYPIY-----LDLIVDGYSL--RDQFEWDVSNDYRATQIFAATLCADLKLPQTFEPAIVFSIYEQVVAYRIVLSGQDWVGTNPLSDKETSSSQSFSRAGYIEVMPPLDDIIRSTEDTKLWQPV 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1689.3855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1689.3855.1 ID=prot_H-paniculata_contig1689.3855.1|Name=mRNA_H-paniculata_contig1689.3855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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