mRNA_H-paniculata_contig16850.3838.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 1.340e-15 Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 19 LFMDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVAQ 180
L+ DL P+MEEW+G L +CYGVR Y R S+LANHVDR++THVISAIINV Q
Sbjct: 159 LYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ 212
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 6.270e-15 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 19 LFMDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIIN 171
L+ DL P+MEEW+G+ L +CYGVR Y R S+LANHVDR++THVISAIIN
Sbjct: 159 LYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN 209
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: A0A7S2UYU0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYU0_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 4.980e-12 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 1 GSSLQLLFMDLEPLMEEWAGL-PLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVAQ 180
G LL D++PL+E+WA + L S YG+R Y R SVL NHVD + THV+SAIINVAQ
Sbjct: 69 GQERTLLTQDIQPLLEDWADMYDLEMTSIYGIRQYTRGSVLRNHVDTVNTHVVSAIINVAQ 129
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: A0A831ZFP2_9GAMM (Proline hydroxylase n=1 Tax=Crenotrichaceae bacterium TaxID=2268193 RepID=A0A831ZFP2_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 1.100e-10 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 13 QLLFMDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVAQ 180
Q + ++PL+E+W G L P YG+RIY ++L +H DR+ETH+ISAIINV Q
Sbjct: 20 QTIHDTMKPLLEKWCGEALEPTYVYGIRIYHHKAILKSHRDRLETHIISAIINVDQ 75
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: UPI0019D3808F (2OG-Fe(II) oxygenase n=1 Tax=Bowmanella dokdonensis TaxID=751969 RepID=UPI0019D3808F) HSP 1 Score: 63.9 bits (154), Expect = 2.000e-10 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 31 LEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVAQ 180
L+PL+E+W G PLAP YG+R+Y ++L H DR++TH+ISAIINV Q
Sbjct: 360 LKPLLEQWCGKPLAPTYVYGIRVYHHGAMLKLHRDRLDTHIISAIINVDQ 409
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: UPI00037B83B9 (2OG-Fe(II) oxygenase n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI00037B83B9) HSP 1 Score: 63.5 bits (153), Expect = 2.730e-10 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 13 QLLFMDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVAQ 180
Q +F + PL+EEW L L P + YG+R Y R + L HVDRI+TH +S IINVAQ
Sbjct: 356 QTIFTTICPLLEEWTQLELKPSAIYGIREYQRGATLKMHVDRIDTHQVSMIINVAQ 411
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: F0Y7M0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7M0_AURAN) HSP 1 Score: 63.5 bits (153), Expect = 2.780e-10 Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 1 GSSLQLLFMDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINV 174
GS L +L P ME WAG+ L YGVR+YG S L NH+DR ETHV+SAI ++
Sbjct: 904 GSLNNRLLDELRPRMEAWAGVELRNGQAYGVRVYGNGSTLVNHIDRSETHVVSAIFHI 961
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: A0A7S2WA34_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WA34_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.670e-10 Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 31 LEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVA 177
L+PL EEWAG+ L P S YGVR+Y S L +H+D +ETHVIS I++VA
Sbjct: 182 LKPLFEEWAGVDLEPTSVYGVRVYRNGSTLKDHLDVLETHVISGILHVA 230
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: Q21FK1_SACD2 (2OG-Fe(II) oxygenase n=2 Tax=Saccharophagus degradans TaxID=86304 RepID=Q21FK1_SACD2) HSP 1 Score: 62.8 bits (151), Expect = 5.110e-10 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 13 QLLFMDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVAQ 180
Q + +L+P ME W PLAP YG+R Y R + L H DR+ETH+ISAIIN+AQ
Sbjct: 364 QAVHDELKPKMEAWCNQPLAPTYVYGIREYHRGAKLKMHRDRLETHIISAIINIAQ 419
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Match: A0A7S4A4C6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4C6_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 9.540e-10 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 4 SSLQLLFMD-LEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINV 174
S L +D L P +EEW+G+ L YGVR+YG S L NH+DR ETHVISAI ++
Sbjct: 178 SQLNAKLLDGLRPNLEEWSGIELQNGQSYGVRVYGEGSTLVNHIDRCETHVISAIFHI 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16850.3838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16850.3838.1 >prot_H-paniculata_contig16850.3838.1 ID=prot_H-paniculata_contig16850.3838.1|Name=mRNA_H-paniculata_contig16850.3838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp MDLEPLMEEWAGLPLAPKSCYGVRIYGRDSVLANHVDRIETHVISAIINVback to top mRNA from alignment at H-paniculata_contig16850:5379..5558- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16850.3838.1 ID=mRNA_H-paniculata_contig16850.3838.1|Name=mRNA_H-paniculata_contig16850.3838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=180bp|location=Sequence derived from alignment at H-paniculata_contig16850:5379..5558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16850:5379..5558- >mRNA_H-paniculata_contig16850.3838.1 ID=mRNA_H-paniculata_contig16850.3838.1|Name=mRNA_H-paniculata_contig16850.3838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=312bp|location=Sequence derived from alignment at H-paniculata_contig16850:5379..5558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |