mRNA_H-paniculata_contig16697.3779.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: D7G8S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S9_ECTSI) HSP 1 Score: 147 bits (371), Expect = 5.470e-42 Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 2
Query: 32 ASLTQSEREAMKITGFGPTSVSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAV 313
ASLTQS+REA+ + GFGPT V FVKNNGGW+FNLV +HLLFWLFGFTALL++GYSDLNQ+SSG I SGPSGSGVGIITTLL+ V TLVV+AKA+
Sbjct: 4 ASLTQSQREALIVKGFGPTMVHFVKNNGGWMFNLVFAHLLFWLFGFTALLEFGYSDLNQDSSGQIKSGPSGSGVGIITTLLMAVGTLVVVAKAI 97
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: G4ZCN4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCN4_PHYSP) HSP 1 Score: 76.3 bits (186), Expect = 2.020e-14 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 2
Query: 92 VSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVSLFG 325
+ FV +N GW FNL+ +HLL+W+ GF LDYGYS ++ G + SGP GSG ++T + V+ T V +A+ VS FG
Sbjct: 15 IHFVTDNSGWTFNLITTHLLWWIVGFPIALDYGYSSKAYDAKGALPSGPEGSGAYVVTLFVCVLCTAVYMARLVSYFG 92
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: W2R6Z7_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R6Z7_PHYPN) HSP 1 Score: 73.2 bits (178), Expect = 3.080e-13 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 2
Query: 92 VSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVSLF 322
V FV +N GW FNL+ +HLL+W+ GF LDYGYS + G + SGP GSGV I+T + + T V +A+ +S F
Sbjct: 16 VHFVTDNSGWTFNLITTHLLWWIVGFPIALDYGYSSDAYDGKGALPSGPEGSGVYIVTLFVCTLCTAVYLARLISYF 92
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A3F2RGG8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RGG8_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.420e-13 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query: 92 VSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVS 316
V F+K+N GW FNL+ +HLLFW+ GF L+YGYS + + G + SGP GSG ++T + + T V +A+ +S
Sbjct: 20 VHFIKDNSGWTFNLITTHLLFWIVGFPIGLEYGYSSQSYDKKGALPSGPEGSGAYVVTLFVCALCTAVYLARVIS 94
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A329T309_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329T309_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.040e-13 Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 2
Query: 92 VSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVSLF 322
V FV +N GW FNL+ +HLL+W+ GF LDYGYS ++ G + SGP GSGV ++T + + T V A+ +S F
Sbjct: 16 VHFVTDNSGWTFNLITTHLLWWIVGFPIALDYGYSSDAYDAKGALPSGPEGSGVYVVTLFVCTLCTAVYFARLISYF 92
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A397AWI6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AWI6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.040e-12 Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = 2
Query: 86 TSVSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVS 316
T ++++++N GW FNLV+S++LFWL GF DYGYS+++ N G I SG GSGV +IT +L+++ LV + +S
Sbjct: 13 TVLAYIQDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGGIASGGEGSGVFVITLVLMLICYLVYFGRMIS 89
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A225X6B2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X6B2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.660e-12 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 2
Query: 98 FVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVSLFG 325
FV +N GW FNL+ +HLL+W+ GF L YGYS + N G + SGP GSG I+T + + T V A+ VS FG
Sbjct: 18 FVLDNSGWTFNLITTHLLWWIVGFPIGLKYGYSSNSYNDKGGLPSGPEGSGAYIVTLFVCALCTAVYFARLVSYFG 93
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A6G0XHM4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHM4_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.440e-12 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 2
Query: 86 TSVSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAKAVS 316
T V ++++N GW FNLV+S++LFWL GF + DYGYS N + +G I SG GSGV +IT +L+V+ +V + V+
Sbjct: 7 TVVGYIQDNVGWGFNLVVSNILFWLTGFPTVRDYGYSSENYDENGGIPSGGEGSGVFVITLVLMVICYIVYFGRMVT 83
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A485KR65_9STRA (Aste57867_10737 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR65_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.510e-12 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 2
Query: 68 ITGFGP--TSVSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLVVIAK 307
+T GP T + ++ +N GW FNL++S++LFWL GF + DYGYS N + +G I SG GSGV +IT +L++V LV ++
Sbjct: 1 MTAHGPPRTVLGYILDNQGWGFNLIISNILFWLTGFPTVRDYGYSSTNYDENGGIPSGGEGSGVFVITLVLMIVCYLVYFSR 82
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Match: A0A024T7R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T7R1_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.890e-12 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 2
Query: 86 TSVSFVKNNGGWIFNLVMSHLLFWLFGFTALLDYGYSDLNQNSSGTIVSGPSGSGVGIITTLLVVVSTLV 295
T V+FV +N GW FNLV+S++LFWL GF DYGYS+++ N G I SG GSGV +IT +L+++ LV
Sbjct: 12 TVVAFVLDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGGIPSGGEGSGVFVITLVLMLICYLV 81 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16697.3779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16697.3779.1 >prot_H-paniculata_contig16697.3779.1 ID=prot_H-paniculata_contig16697.3779.1|Name=mRNA_H-paniculata_contig16697.3779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp MEASLTQSEREAMKITGFGPTSVSFVKNNGGWIFNLVMSHLLFWLFGFTAback to top mRNA from alignment at H-paniculata_contig16697:1594..2579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16697.3779.1 ID=mRNA_H-paniculata_contig16697.3779.1|Name=mRNA_H-paniculata_contig16697.3779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=986bp|location=Sequence derived from alignment at H-paniculata_contig16697:1594..2579+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16697:1594..2579+ >mRNA_H-paniculata_contig16697.3779.1 ID=mRNA_H-paniculata_contig16697.3779.1|Name=mRNA_H-paniculata_contig16697.3779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at H-paniculata_contig16697:1594..2579+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |