mRNA_H-paniculata_contig16679.3772.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: D8LSH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH0_ECTSI) HSP 1 Score: 343 bits (880), Expect = 1.650e-116 Identity = 166/202 (82.18%), Postives = 179/202 (88.61%), Query Frame = 1
Query: 1 FPQAFVLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSCA--GSQYIFEEKVMAVDNAPPLIVIGMEGLWGTIIMFIVLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
F +AFVL Q LAAYMWWGV INI AMVLVSVTNF+ PEDAQP+GANNP LGAFFIL+SC GSQYIFEEKVMAVDNAPPL+VIGMEGLWGT+IM ++ PIAA LPGRDLGS+ENT DSFYMV S IQ+ML +FFVTITTYNIFCIYVTAYLSAIWHAILDNFRP+SVW TDL IYY IT GSFGEAWT+YSWLQFSGMM
Sbjct: 134 FLKAFVLNQRLAAYMWWGVAINIVAMVLVSVTNFIAPEDAQPDGANNPALGAFFILLSCIVQGSQYIFEEKVMAVDNAPPLVVIGMEGLWGTLIMLVIFPIAAALPGRDLGSIENTQDSFYMVSQSNTIQLMLLIFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPVSVWSTDLVIYYMITNGSFGEAWTQYSWLQFSGMM 335
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: A0A836CAF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF8_9STRA) HSP 1 Score: 305 bits (781), Expect = 4.690e-100 Identity = 148/202 (73.27%), Postives = 167/202 (82.67%), Query Frame = 1
Query: 1 FPQAFVLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSCA--GSQYIFEEKVMAVDNAPPLIVIGMEGLWGTIIMFIVLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
F +AFVLK LA YMW GV INI AMVLVS+TNF+ PEDAQP+GANNP LG FFIL+SC GSQYIFEEKVMAVD+APPL+VIGMEGLWG++IM + PI PG D GS+ENTWDS MV S IQ +LA+FFVT+T YNIFCIYVTAYLSAIWHAILDNFRP+SVWGTDLAI+Y T G+FGEAWT+YSWLQ GM+
Sbjct: 134 FLKAFVLKDRLAGYMWVGVAINIVAMVLVSLTNFIAPEDAQPDGANNPALGVFFILLSCVVQGSQYIFEEKVMAVDDAPPLVVIGMEGLWGSVIMLALFPILYYTPGADKGSIENTWDSIDMVRNSAPIQTLLAIFFVTVTMYNIFCIYVTAYLSAIWHAILDNFRPVSVWGTDLAIFYIFTAGAFGEAWTRYSWLQAVGML 335
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: A0A6H5KUQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ5_9PHAE) HSP 1 Score: 262 bits (669), Expect = 6.540e-84 Identity = 126/153 (82.35%), Postives = 137/153 (89.54%), Query Frame = 1
Query: 1 FPQAFVLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSCAGSQYIFEEKVMAVDNAPPLIVIGMEGLWGTIIMFIVLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLS 459
F +AFVLKQ LAAYMWWGV INI AMVLVSVTNF+ PEDAQP+GANNP LGAFFIL+SC GSQYIFEEKVMAVDNAPPL+VIGMEGLWGT+IM ++ PIAA LPGRDLGS+ENT DSFYMV S IQ+ML +FFVTITTYNIFCIYVTAYLS
Sbjct: 134 FLKAFVLKQRLAAYMWWGVAINIVAMVLVSVTNFIAPEDAQPDGANNPALGAFFILLSCIGSQYIFEEKVMAVDNAPPLVVIGMEGLWGTLIMLVIFPIAAALPGRDLGSIENTQDSFYMVSQSNAIQLMLLIFFVTITTYNIFCIYVTAYLS 286
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: K8YYA0_NANGC (Drug metabolite transporter superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYA0_NANGC) HSP 1 Score: 232 bits (591), Expect = 5.060e-72 Identity = 116/204 (56.86%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 1 FPQAFVLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSCA--GSQYIFEEKVMAVDNAPPLIVIGMEGLWGTIIMFIVL-PIAAMLPGRDLG-SVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
F +AFVLK HLA +MW GV+IN+ AMVLV+ T F + ++ N +P +G FIL+SC G+QY+FEEKVM V++ PP++++G+EG WG I+M +V+ P A LPG D G S+EN +DS MV S +Q +L +FF+T+ YNIF IYVT +LS++WHAILDNFRP+SVWGTDL IYY T G FGEAWT YSWLQF GM+
Sbjct: 110 FAKAFVLKDHLAPHMWLGVSINLVAMVLVASTTFFDHKNTVDN--RDPRVGIGFILLSCLVQGTQYVFEEKVMTVESLPPMVLVGLEGFWGMILMLLVVFPSAYYLPGTDEGGSMENVFDSLAMVRNSAPLQAVLLIFFLTVACYNIFAIYVTHFLSSVWHAILDNFRPISVWGTDLLIYYVFTYGRFGEAWTVYSWLQFGGML 311
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: W7UAT2_9STRA (Drug metabolite transporter superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAT2_9STRA) HSP 1 Score: 230 bits (586), Expect = 4.720e-70 Identity = 115/202 (56.93%), Postives = 150/202 (74.26%), Query Frame = 1
Query: 7 QAFVLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSCA--GSQYIFEEKVMAVDNAPPLIVIGMEGLWGTIIMFIVL-PIAAMLPGRDLG-SVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
+AFVLK HLA +MW GV+IN+ AMVLV+ T F + ++ N +P +G FIL+SC G+QY+FEEKVM V++ PP++++G+EG WG I+M +V+ P A LPG D G S+EN +DS MV S +Q +L +FF+T+ YNIF IYVT +LS++WHAILDNFRP+SVWGTDL IYY T G FGEAWT YSWLQF GM+
Sbjct: 87 KAFVLKDHLAPHMWLGVSINLVAMVLVASTTFFDHKNTVDN--RDPRVGIGFILLSCLVQGTQYVFEEKVMTVESLPPMVLVGLEGFWGMILMLLVVFPSAYYLPGTDEGGSMENVFDSLAMVRNSAPLQAVLLIFFLTVACYNIFAIYVTHFLSSVWHAILDNFRPISVWGTDLLIYYVFTYGRFGEAWTVYSWLQFGGML 286
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: T0Q499_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q499_SAPDV) HSP 1 Score: 208 bits (529), Expect = 4.960e-62 Identity = 104/200 (52.00%), Postives = 134/200 (67.00%), Query Frame = 1
Query: 16 VLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSC--AGSQYIFEEKVMA--VDNAPPLIVIGMEGLWGTIIM-FIVLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
VLK HL YMW G+ +N A ++V T+F + +D Q N NNP LG I++SC +QY+FEEK+M +D APPLIV+GMEG WG + IV PIA LPG DLGS E D+ M+G SQ QI +F I YN+F ++VT L +IWHAILDNFRP++VWGTDL ++Y T G+FGEAWT +SWL+ GM+
Sbjct: 143 VLKDHLRGYMWIGIAMNTAAAIMVGFTSFQDTDD-QLNSTNNPGLGILMIVLSCFVQSAQYVFEEKLMGDGIDTAPPLIVVGMEGFWGLLFTSVIVYPIAYYLPGNDLGSYERFDDALTMLGNSQAAQIAAGIFVFVILGYNVFAVFVTFLLDSIWHAILDNFRPITVWGTDLLLFYVFTPGTFGEAWTIWSWLELGGML 341
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: A0A8K1C3U3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3U3_PYTOL) HSP 1 Score: 202 bits (513), Expect = 8.020e-60 Identity = 100/200 (50.00%), Postives = 140/200 (70.00%), Query Frame = 1
Query: 16 VLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGAN-NPTLGAFFILMSCA--GSQYIFEEKVMAV-DNAPPLIVIGMEGLWGTIIM-FIVLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
+LK L YMW G+ +N A +LV T+F + +D N N +P G I++SCA QY++EEK+M D+APPL+V+GMEG+WG ++ F+V PIA ++PG DLGS E D+F M+ SQ QI++ V+ + I YN+F + VT L++IWHAILDNFRP++VWGTDL ++Y TKG+FGEAWT +SWLQ +GM+
Sbjct: 132 ILKDRLRGYMWIGIGLNTLAALLVGATSFADQDDQSNNNQNAHPGFGILMIILSCAVQAFQYVYEEKLMDEGDSAPPLVVVGMEGVWGLVLTTFVVYPIAYLVPGNDLGSNERFDDAFEMLLNSQLAQIIVGVYLLVILGYNVFAVSVTYLLNSIWHAILDNFRPITVWGTDLLLFYVFTKGAFGEAWTIWSWLQLAGMV 331
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: A0A067CV30_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CV30_SAPPC) HSP 1 Score: 206 bits (524), Expect = 6.850e-59 Identity = 103/200 (51.50%), Postives = 134/200 (67.00%), Query Frame = 1
Query: 16 VLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSC--AGSQYIFEEKVMA--VDNAPPLIVIGMEGLWGTIIMFI-VLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
VLK HL YMW G+ +N A ++V T+F + +D Q N NNP LG I++SC +QY+FEEK+M +D APPLIV+GMEG WG + I V PIA LPG DLGS E D+ M+G S+ QI +F I YN+F ++VT L +IWHAILDNFRP++VWGTDL ++Y T G+FGEAWT +SWL+ GM+
Sbjct: 455 VLKDHLRGYMWIGIAMNTAAAIMVGFTSFQDTDD-QLNSTNNPGLGILMIVLSCFVQSAQYVFEEKLMGDGIDTAPPLIVVGMEGFWGLLFTSIFVYPIAYYLPGNDLGSYERFDDALTMLGHSKAAQIAAGIFVFVILGYNVFAVFVTFLLDSIWHAILDNFRPITVWGTDLLLFYVFTPGTFGEAWTIWSWLELGGML 653
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: A0A7S2UXM1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM1_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.400e-58 Identity = 101/196 (51.53%), Postives = 134/196 (68.37%), Query Frame = 1
Query: 25 QHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSCA--GSQYIFEEKVMAVDNAPPLIVIGMEGLWGTII-MFIVLPIAAMLPGRDLG-SVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
+ LA YMW GV +N AM LV T+F+E E ++P LG F I++S G+QY+FEEKVMA DN PPL+VIGMEG WG ++ FI P+A +LPG D G S E+ +D++ M I++++ +FFV+IT YN+ IYVT LS+IWHAILDNFRP+SVW L IYY + G+ GEAW YS+LQ +GM+
Sbjct: 1 ERLAGYMWAGVVVNTIAMALVGSTSFMEDESGGGVLGSDPKLGFFLIMLSVVVQGAQYVFEEKVMANDNCPPLMVIGMEGFWGVLLTFFIAFPVAYILPGNDYGGSFESAYDAWVMWMNDGKIRLLVCLFFVSITGYNVMSIYVTKLLSSIWHAILDNFRPVSVWMFGLLIYYSWSDGTMGEAWGTYSFLQLAGML 196
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Match: A0A6G0XVI4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVI4_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.740e-58 Identity = 99/200 (49.50%), Postives = 138/200 (69.00%), Query Frame = 1
Query: 16 VLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLGAFFILMSC--AGSQYIFEEKVMA--VDNAPPLIVIGMEGLWGTIIM-FIVLPIAAMLPGRDLGSVENTWDSFYMVGASQGIQIMLAVFFVTITTYNIFCIYVTAYLSAIWHAILDNFRPLSVWGTDLAIYYFITKGSFGEAWTKYSWLQFSGMM 600
VL HL YMW G+ +N A ++V ++F + E+ Q N +NP LG I++SC +QY+FEEK+M +D APPLIV+GMEGLWG I+ IV PIA +PG DLGS E D++YM+ S Q+ A+F + I YN+F ++VT L++IWHAILDNFRP++VWGTDL ++Y T +FGEAWT +S+L+ +GM+
Sbjct: 143 VLGDHLKRYMWIGIGMNTVAALMVGFSSFQDTEE-QINNNDNPGLGIIMIILSCFVQSAQYVFEEKLMGDGIDTAPPLIVVGMEGLWGLIMTGLIVYPIAYFVPGNDLGSYERIDDAWYMLTNSPTAQVAAAIFLIVILGYNVFAVFVTFLLNSIWHAILDNFRPVTVWGTDLLLFYVFTPRTFGEAWTSWSYLELTGMI 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16679.3772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16679.3772.1 >prot_H-paniculata_contig16679.3772.1 ID=prot_H-paniculata_contig16679.3772.1|Name=mRNA_H-paniculata_contig16679.3772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp FPQAFVLKQHLAAYMWWGVTINIFAMVLVSVTNFVEPEDAQPNGANNPTLback to top mRNA from alignment at H-paniculata_contig16679:1337..5517- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16679.3772.1 ID=mRNA_H-paniculata_contig16679.3772.1|Name=mRNA_H-paniculata_contig16679.3772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4181bp|location=Sequence derived from alignment at H-paniculata_contig16679:1337..5517- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16679:1337..5517- >mRNA_H-paniculata_contig16679.3772.1 ID=mRNA_H-paniculata_contig16679.3772.1|Name=mRNA_H-paniculata_contig16679.3772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1200bp|location=Sequence derived from alignment at H-paniculata_contig16679:1337..5517- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |