prot_H-paniculata_contig16600.3744.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16600.3744.1
Unique Nameprot_H-paniculata_contig16600.3744.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length35
Homology
BLAST of mRNA_H-paniculata_contig16600.3744.1 vs. uniprot
Match: D8LM51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM51_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 4.170e-9
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MRSINVAIALLFGYFVAAVSEKDGLDYVVTDKIEA 35
            MRSINV +ALLFGYFVAAVSE +G DYVV+DKI+A
Sbjct:    1 MRSINVVVALLFGYFVAAVSENNGNDYVVSDKIDA 35          
BLAST of mRNA_H-paniculata_contig16600.3744.1 vs. uniprot
Match: K0QZK3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZK3_THAOC)

HSP 1 Score: 48.5 bits (114), Expect = 1.800e-5
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 MRSINVAIALLFGYFVAAVSEKDGLDYVVTDKIEA 35
            M++ NV IALLFGYF+A VS  +GLDYV  DKI A
Sbjct:  305 MKNANVIIALLFGYFIAGVSNYEGLDYVNNDKIAA 339          
BLAST of mRNA_H-paniculata_contig16600.3744.1 vs. uniprot
Match: A0A1Z5KLZ2_FISSO (Nucleobase:cation symporter-2, NCS2 family n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLZ2_FISSO)

HSP 1 Score: 46.6 bits (109), Expect = 8.660e-5
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    1 MRSINVAIALLFGYFVAAVSEKDGLDYVVTDKI 33
            M++ NV IAL+FGYF+AAVS+ +GL YV  DKI
Sbjct:  281 MKNCNVFIALMFGYFIAAVSDYNGLQYVTKDKI 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16600.3744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM51_ECTSI4.170e-980.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0QZK3_THAOC1.800e-565.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5KLZ2_FISSO8.660e-563.64Nucleobase:cation symporter-2, NCS2 family n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16600contigH-paniculata_contig16600:5379..5483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16600.3744.1mRNA_H-paniculata_contig16600.3744.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16600 5379..5513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16600.3744.1 ID=prot_H-paniculata_contig16600.3744.1|Name=mRNA_H-paniculata_contig16600.3744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=35bp
MRSINVAIALLFGYFVAAVSEKDGLDYVVTDKIEA
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