prot_H-paniculata_contig16588.3735.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16588.3735.1
Unique Nameprot_H-paniculata_contig16588.3735.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.560e-27
Identity = 59/68 (86.76%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    3 GGNSGA-PIGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            GGN+GA P GRRIRAVSLIKGVD GP+GL LISD IREGL GAVPVSVLMGANVANEVARDELCEST+
Sbjct:  149 GGNAGAAPGGRRIRAVSLIKGVDKGPDGLKLISDHIREGLCGAVPVSVLMGANVANEVARDELCESTL 216          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: GPD1L_DANRE (Glycerol-3-phosphate dehydrogenase 1-like protein n=17 Tax=Teleostei TaxID=32443 RepID=GPD1L_DANRE)

HSP 1 Score: 73.9 bits (180), Expect = 6.740e-14
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            +  R R ++LIKG+D GPEGL LISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:  110 VSERARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 167          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A8C1D307_CYPCA (Glycerol-3-phosphate dehydrogenase 1 like n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1D307_CYPCA)

HSP 1 Score: 72.0 bits (175), Expect = 9.640e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            +  + R ++LIKG+D GPEG+ LISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:  110 VSEKARGITLIKGIDEGPEGMKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 167          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: W5M2H7_LEPOC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Lepisosteidae TaxID=7915 RepID=W5M2H7_LEPOC)

HSP 1 Score: 73.2 bits (178), Expect = 1.280e-13
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            + ++ R +SLIKG+D GPEGL LISD IRE +   + VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  110 VSQKARGISLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCETTI 167          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A8C4SNB9_ERPCA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Tax=Polypteridae TaxID=8289 RepID=A0A8C4SNB9_ERPCA)

HSP 1 Score: 73.2 bits (178), Expect = 1.310e-13
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            + RR   +SLIKG+D GPEGL LISD IRE +   + VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  114 VSRRALGISLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCETTI 171          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A3B3SXD1_9TELE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A3B3SXD1_9TELE)

HSP 1 Score: 72.8 bits (177), Expect = 1.770e-13
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            + R  R ++LIKG+D GPEGL LISD IRE +  ++ VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  110 VSRTARGITLIKGIDEGPEGLRLISDIIREKM--SIDVSVLMGANIANEVAAEKFCETTI 167          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: UPI0018FFF67C (glycerol-3-phosphate dehydrogenase 1-like protein isoform X2 n=2 Tax=Teleostei TaxID=32443 RepID=UPI0018FFF67C)

HSP 1 Score: 72.4 bits (176), Expect = 2.050e-13
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            +  + R ++LIKG+D GPEGL LISD IRE +  A+ VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  110 VSSQARGITLIKGIDEGPEGLKLISDIIREKM--AIDVSVLMGANIANEVAAEKFCETTI 167          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A8C1CIE9_CYPCA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1CIE9_CYPCA)

HSP 1 Score: 72.0 bits (175), Expect = 2.390e-13
Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            +  + R ++LIKG+D GPEGL LISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:   91 VSDKARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 148          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A3Q0TAH3_AMPCI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=10 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A3Q0TAH3_AMPCI)

HSP 1 Score: 72.4 bits (176), Expect = 2.420e-13
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0
Query:   17 VSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            +SLIKGVD GPEGLTLISD IRE L   + VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  116 ISLIKGVDEGPEGLTLISDIIREKLQ--IEVSVLMGANIANEVADEKFCETTI 166          
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Match: A0A672LR38_SINGR (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=36 Tax=Clupeocephala TaxID=186625 RepID=A0A672LR38_SINGR)

HSP 1 Score: 72.4 bits (176), Expect = 2.440e-13
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   10 IGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVLMGANVANEVARDELCESTV 69
            +  + R ++LIKG+D GPEGL LISD IRE +   + +SVLMGAN+ANEVA ++ CEST+
Sbjct:  110 VSEKARGITLIKGIDEGPEGLKLISDIIREKM--GIDISVLMGANIANEVAAEKFCESTI 167          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16588.3735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZY6_9PHAE5.560e-2786.76Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
GPD1L_DANRE6.740e-1460.00Glycerol-3-phosphate dehydrogenase 1-like protein ... [more]
A0A8C1D307_CYPCA9.640e-1456.67Glycerol-3-phosphate dehydrogenase 1 like n=2 Tax=... [more]
W5M2H7_LEPOC1.280e-1358.33Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta... [more]
A0A8C4SNB9_ERPCA1.310e-1360.00Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Ta... [more]
A0A3B3SXD1_9TELE1.770e-1358.33Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta... [more]
UPI0018FFF67C2.050e-1358.33glycerol-3-phosphate dehydrogenase 1-like protein ... [more]
A0A8C1CIE9_CYPCA2.390e-1358.33Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A3Q0TAH3_AMPCI2.420e-1369.81Glycerol-3-phosphate dehydrogenase [NAD(+)] n=10 T... [more]
A0A672LR38_SINGR2.440e-1356.67Glycerol-3-phosphate dehydrogenase [NAD(+)] n=36 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 5..69
e-value: 8.4E-14
score: 53.4
NoneNo IPR availablePANTHERPTHR11728:SF32GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMICcoord: 15..69
NoneNo IPR availablePANTHERPTHR11728GLYCEROL-3-PHOSPHATE DEHYDROGENASEcoord: 15..69
IPR011128Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminalPFAMPF01210NAD_Gly3P_dh_Ncoord: 12..69
e-value: 1.7E-10
score: 41.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16588contigH-paniculata_contig16588:3074..3791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16588.3735.1mRNA_H-paniculata_contig16588.3735.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16588 3074..3791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16588.3735.1 ID=prot_H-paniculata_contig16588.3735.1|Name=mRNA_H-paniculata_contig16588.3735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
DKGGNSGAPIGRRIRAVSLIKGVDNGPEGLTLISDKIREGLHGAVPVSVL
MGANVANEVARDELCESTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011128G3P_DH_NAD-dep_N