prot_H-paniculata_contig1658.3731.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1658.3731.1
Unique Nameprot_H-paniculata_contig1658.3731.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length590
Homology
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BLAST of mRNA_H-paniculata_contig1658.3731.1 vs. uniprot
Match: A0A6H5K0I5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I5_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.700e-5
Identity = 37/103 (35.92%), Postives = 65/103 (63.11%), Query Frame = 0 
Query:  193 EKEAQYLRERLETIPGEIKTENNRAWEQREQKLREAVGAEVRAQADAEATEXXXXXKTDLEAALARQSDELAASHRAALRDAVGATAAEKDVLLSEIRQSATR 295
            E++A+ LRERLE +PGE++ E  R ++++E+ +RE +   +    D++A       + +LE +LA +++EL ASH A+L+ A  A AAE+D  + ++R    R
Sbjct:  586 EEQAELLRERLERVPGEVRAELEREFQEKERLVREGMQQCL----DSQAAGMETLWRAELERSLALRTEELEASHEASLKGATAAAAAERDEAVRQVRDELAR 684
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1658.3731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0I5_9PHAE1.700e-535.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 293..344
NoneNo IPR availableCOILSCoilCoilcoord: 435..477
NoneNo IPR availableCOILSCoilCoilcoord: 390..410
NoneNo IPR availableCOILSCoilCoilcoord: 32..84
NoneNo IPR availableCOILSCoilCoilcoord: 168..195
NoneNo IPR availableCOILSCoilCoilcoord: 361..388
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availableCOILSCoilCoilcoord: 97..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1658contigH-paniculata_contig1658:18918..23130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1658.3731.1mRNA_H-paniculata_contig1658.3731.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1658 18918..23130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1658.3731.1 ID=prot_H-paniculata_contig1658.3731.1|Name=mRNA_H-paniculata_contig1658.3731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=590bp
SAAAQAEEEARLERDRIVQETDAAAQKSTAAVSELHRQLERSRQDLEQAQ
RSQADQAHQASRTAQAAQSAAAQAEEEARLERDRIVQEADAAAQKSAAAV
SELHRQLERSRQDLERAQRSQADQAHQASRTAKAAQAAAARAEEEARLER
DRIVREADDAAQKSAVAVDVAERRAEQAEAAVDASADKVRAVEKEAQYLR
ERLETIPGEIKTENNRAWEQREQKLREAVGAEVRAQADAEATEAQAAAKT
DLEAALARQSDELAASHRAALRDAVGATAAEKDVLLSEIRQSATRLEGRS
RLAEGALEEARSEGQAARAEAADARRAARKLEELAALREKALGKAKLAVA
VATAAAADELVAAVKKEKASAAALLEEAARNADELHRRTMEETTRRFAEE
KRELTEAAAVEKTGALAEVRVELAQGLEAGEREHRLELDRAMQEFEEQKR
VAVEEALGRALKEREEAETAMRRSLQEEFQAEHGAADVAREEERTRVEEE
RAQAEAERCADVARQHAQDKADAVKAATEARSREAQRKWEEERRALQGEW
DAWRSRDAFETARRHTEDTAEAVTVAVEEERDRLEGRLRE
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