prot_H-paniculata_contig16454.3682.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16454.3682.1
Unique Nameprot_H-paniculata_contig16454.3682.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
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BLAST of mRNA_H-paniculata_contig16454.3682.1 vs. uniprot
Match: D8LHL7_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.930e-16
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0 
Query:   26 GRLTQARASYRRGLAAYNDQSTTMGFKSPLDVLKQGIARAGAGPYDQEAVQRAVASYKS-DNKVVVFSWTTC 96
            G +T    S RR       ++TTMGFKSP+DVLKQGIA+ GAGPYD++AV + V  Y S  NKVVVFSWT C
Sbjct:   47 GSVTARHRSVRR-----TTRTTTMGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRC 113
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16454.3682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHL7_ECTSI3.930e-1658.33Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.853
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16454contigH-paniculata_contig16454:1385..3657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16454.3682.1mRNA_H-paniculata_contig16454.3682.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16454 1319..3798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16454.3682.1 ID=prot_H-paniculata_contig16454.3682.1|Name=mRNA_H-paniculata_contig16454.3682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MRSARQAIILLFSTLIVGAEAFLPPGRLTQARASYRRGLAAYNDQSTTMG
FKSPLDVLKQGIARAGAGPYDQEAVQRAVASYKSDNKVVVFSWTTCVAFE
GRE*
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