prot_H-paniculata_contig163.3611.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig163.3611.1
Unique Nameprot_H-paniculata_contig163.3611.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length687
Homology
BLAST of mRNA_H-paniculata_contig163.3611.1 vs. uniprot
Match: D7FLD7_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 5.420e-14
Identity = 155/538 (28.81%), Postives = 221/538 (41.08%), Query Frame = 0
Query:    1 MIFSSAARTLHLYAETRAEHNQWVTGMAALCPKAFIKLERNAPLLKRTNNAQ--------LTPIHVRRE-SMERARHISEKQGHKENLGVSNVGGTGGSLRDSTHYSIEDVND--------------GEDETIEADHHILSAEDEDCRRSTSEDLRKQPSRIDQECDRGRR--EKQSSSRASIEIRDSGDSGNSMSRKNNSEHRGDASTRGGGDINPDEGEGAPQNESRRRSKTFQGEDREEMCGENYDFSKEISDDIQKRVDREVSATVNEGERREQTKNRERGEVNMVDNIEDGSGKAAYATNGRRRFDSHSSVDGGDDLDEKAC---------------VGKH-----SDNKYAHESGTLHDKLERKPEFRTLDGDESANNLDGNDDLGHKPSQEEDTRHATD-RKEEGGPDHTC----SNQDEERE-LDQCAELEILTPSLEI-TWEKPRRRGTATSRLHRHISRIGEPEDRPDGHLLPPPKEFLSNHSSGSQSTIRRGQDNPPEAKDSGLQLIIKSTRKSRRRSAADLEWGDG 486
            +I +SAARTLHLYA+TRA+HN WVTG+A LCP AF  L RNA + +  N+ +        LTP  V +  + +R + + + Q +    GV +   T  S   S ++     +D              G+    E  H   S      RR +    RKQ  R D E  RGRR   ++ S       R+  +    +       HRG+   +G                S RR K  QG+      GE+   +K  S D ++  D   S T N     +   +R+ G  +          K+ +        D     D  D+ D   C               VG+      SD        +  D++ +K        +E+   ++   D G  P       H    R+ E  P        SNQDEE+E +D+ A++++  P L+I  WE P +  +ATSRLHRHISR         G + PPPKEFL++  + S ST         E    G   + K T   RRRSAADLEW DG
Sbjct:   76 IIVTSAARTLHLYAQTRAQHNLWVTGLAKLCPHAFAILGRNASVRRMENDLRMTSPTDTSLTPAVVDKSFAKDRDKPVIDPQENHSVDGVESSPSTNESDSQSEYFQTARGHDIKRDRNGRHRGQSAGDHGAPEEPHASWSTP----RRDSRNVARKQRHRGDAE--RGRRGGNERVSKGPCHRRREDYEDRRLVRSSGRLVHRGNTCDKG----------------STRRRK--QGQRSRGSGGESV--AKASSHDEEESSDTSASPTRNCRNAGDTRDDRDAGATS----------KSCFTGLPSSASDEDGHEDVADERDLGPCGQYAGRLDEGLNPTSVGEKGSTVSSDMVVVRPPESQDDEMTKKSRAYYSSDNENVETIEL--DEGESPV----VAHIVQVRQPEDNPAPASVPRKSNQDEEKEEVDEEADIDLAVPRLKIGDWEGPHQGQSATSRLHRHISRRDTEAVGFSGGV-PPPKEFLTHKLAESPSTT------DCERNTGGSDGLPKPTTNGRRRSAADLEWNDG 564          
BLAST of mRNA_H-paniculata_contig163.3611.1 vs. uniprot
Match: A0A6H5JEF7_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF7_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.370e-12
Identity = 144/541 (26.62%), Postives = 217/541 (40.11%), Query Frame = 0
Query:    1 MIFSSAARTLHLYAETRAEHNQWVTGMAALCPKAFIKLERNAPLLKRTNNAQLT---------PIHVRRE-SMERARHISEKQGHKENLGVSNVGGTGGSLRDSTHYSIEDVND--------------GEDETIEADHHILSAEDEDCRRSTSEDLRKQPSRIDQECDRGRREKQSSSRASIEIRDSGDSGNSMSRKNNSEHRGDASTRGGGDINPDEGEGAPQNESRRRSKTFQGEDREEMCGENYDFSKEISDDIQKRVDREVSATVNEGERREQTKNRERGEVNMVDNIEDGSGKAAYATNGRRRFDSHSSVDGGDDLDEKAC-------------------VGKHSDNKYA-HESGTLHDKLERKPE---------FRTLDGDESANNLDGNDDLGHKPSQEEDTRHATDRKEEGGPDHTCSNQDEERE-LDQCAELEILTPSLEI-TWEKPRRRGTATSRLHRHISRIGEPEDRPDGHLLPPPKEFLSNHSSGSQSTIRRGQDNPPEAKDSGLQLIIKSTRKSRRRSAADLEWGDG 486
            +I +SAARTLHLYA+TRA+HN WVTG+  LCP AF  L RNA + +  N+ ++T         P  V +  + +R + +   Q +    G+ +   T  S   S  +     ++              G+ +  E  H + S    D R   S    KQ  R D EC R    ++ S       R   +    +       HRG+   +G                +RRR++  QG+      GE+   +K  S D ++      S T          +N + G     D       K  +        D +   D  D+ D + C                   VG +S +K          D++ +K             T++ DE  N +  ++ +  +P  +  +  +  RK         SNQDEE+E +D+ A++++  P LEI  WE P +  + TSRLHRHISR         G + PPPKEFL++  + S ST     D   +    GL        K   RSAADLEW DG
Sbjct:   76 IIVTSAARTLHLYAQTRAQHNLWVTGLVKLCPHAFAMLGRNASVRRMENDLRMTSPTGTSLSTPAVVDKSFAKDRYKAVIGPQENHSVDGIESSPSTNESDSQSESFQTARGHETKRGRNGRHRGQSAGDHQVPEEPHALWSTPRRDSRNVVS----KQRHRGDDECGRRGGNERGSKGPCHRRRGEYEDRRLVRSSGRLVHRGNTCDKGS---------------TRRRNEERQGQRSRGRVGESV--AKANSHDEEESSHTSASPT----------RNCKSGGHTKDDRDAGARSKPCFTGLPASASDENGHEDVPDERDLEPCGQYAGRLDEGLTPTSVEEKVGTNSSDKVVVRPPEPRDDEMTKKSRAFYSSDNENVETIELDERENPVVAHN-VQPRPPDDNPSPASVPRK---------SNQDEEKEEVDEEADIDLAVPRLEIGDWEGPHQGQSVTSRLHRHISRRDTEAVGFSGGV-PPPKEFLTHKLAESPST----SDCERKTGSEGLP-------KPTTRSAADLEWNDG 563          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig163.3611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLD7_ECTSI5.420e-1428.81PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JEF7_9PHAE8.370e-1226.62PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 524..551
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..32
score: 6.923

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig163contigH-paniculata_contig163:33038..36084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig163.3611.1mRNA_H-paniculata_contig163.3611.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig163 31917..36272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig163.3611.1 ID=prot_H-paniculata_contig163.3611.1|Name=mRNA_H-paniculata_contig163.3611.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=687bp
MIFSSAARTLHLYAETRAEHNQWVTGMAALCPKAFIKLERNAPLLKRTNN
AQLTPIHVRRESMERARHISEKQGHKENLGVSNVGGTGGSLRDSTHYSIE
DVNDGEDETIEADHHILSAEDEDCRRSTSEDLRKQPSRIDQECDRGRREK
QSSSRASIEIRDSGDSGNSMSRKNNSEHRGDASTRGGGDINPDEGEGAPQ
NESRRRSKTFQGEDREEMCGENYDFSKEISDDIQKRVDREVSATVNEGER
REQTKNRERGEVNMVDNIEDGSGKAAYATNGRRRFDSHSSVDGGDDLDEK
ACVGKHSDNKYAHESGTLHDKLERKPEFRTLDGDESANNLDGNDDLGHKP
SQEEDTRHATDRKEEGGPDHTCSNQDEERELDQCAELEILTPSLEITWEK
PRRRGTATSRLHRHISRIGEPEDRPDGHLLPPPKEFLSNHSSGSQSTIRR
GQDNPPEAKDSGLQLIIKSTRKSRRRSAADLEWGDGELPQEHLSSRLEEK
LAVPVNHGPVDVSDSEDEAGGDLNLEIEKQRRRASAAVQALEAAAKEADK
ERGERTRPWGSRMEGEDSRCRSSNSGKNIVLRKGSKTGGVPAPARPPPGP
SVKARRGHGAPPPGMAAPKLAPRSCSSSERRHDYDENCVSDSWDDEAKSE
AGVRALPLPASGGGTSVSLLDANISNKANHWWYYGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain