mRNA_H-paniculata_contig16250.3593.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16250.3593.1
Unique NamemRNA_H-paniculata_contig16250.3593.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A6H5K5X7_9PHAE (MRG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X7_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 4.180e-123
Identity = 189/266 (71.05%), Postives = 213/266 (80.08%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKA-----------KKARIDIKKDTEDDTGVAEVKVAMPFTLKKQLIMDWERVTHD-RRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYEDREPVRP 762
            VIKLKPSG+QFTYFLHYMGWNSRWDKWV+ESDLM  G EA EMQ+QLK                   KEDQ             K+AR+D+KKDTEDD+GV EVKVAMPFTLKKQL+ DWE VT + RR VKLPRE+TAA+V++ Y+++K  R TPQQ+ARAQELMDGVR+YFDKALPL+LLYRQER+QYD+TV+K PGKSPSEIYGAEHLLRVFVR+PQLLAQSALT PEVTQVQKLL DFLR+MQKNHA FFVQEYED EP  P
Sbjct:   37 VIKLKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKR------KEDQXXXXXXXXXXXXXKRARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPREVTAADVMAQYMDSKANRGTPQQTARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPEEP 296          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A836CM09_9STRA (Putative chromatin binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM09_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.490e-63
Identity = 119/267 (44.57%), Postives = 163/267 (61.05%), Query Frame = 1
Query:    1 VIKLKPSGD-QFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVP-------------------KEDQKAKKARIDIKKDTEDDTGVAEVKVAMPFTLKKQLIMDWERVTHDRR-FVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEY 738
            ++KLK + D +  YF+HY+GWNSRWDKW  E +LM +G E+EE+QK+LK                 +                          KK RID K  TEDD+ +A++K+ +PFTLK+QL+ DWE VT + R  + LPR  TAA VL  ++E+K    T  Q AR +EL+DG+RLYFD+ALPL+LLY  ER  +   V  + G++ SE+YGAEHLLR+F ++P LLAQ+ L   EV Q+Q  LG+FL+YMQKN  + F  +Y
Sbjct:   32 IMKLKQTDDGKHHYFVHYLGWNSRWDKWSEEQELMPDGPESEELQKRLKDEIKQRQGAPKAAVRKSISGGGXXXXXXXXXXXXXXXXXXXAARKKPRIDTKAATEDDSELAQIKLPIPFTLKRQLVQDWENVTQEPRCLLPLPRARTAAHVLDAFIESKRGACTAAQLARFRELVDGLRLYFDRALPLILLYAHEREHHAAVVAHNKGRAASELYGAEHLLRLFTKLPALLAQTNLNSNEVGQLQAKLGEFLKYMQKNAGELFHGDY 298          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A7S2RY99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY99_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.610e-56
Identity = 106/248 (42.74%), Postives = 149/248 (60.08%), Query Frame = 1
Query:    7 KLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVP--KEDQKAKKARIDIKKDTEDDT-GVAEVKVAMPFTLKKQLIMDWERVTHDR--RFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQE 735
            K++  G    YF+HY GW+ +WD+WV  S L+KEG  A++M K+L                +     K  Q+ KKARID ++D E    G  E+K+ +PFTLKK+L+ DWER+T     + V LPR      ++  Y+E+K +RS+ Q   R  EL  G+R YFD ALP+ LLYRQER+QY   V+ HP  + SE+YGAEHLLR+F ++PQ+L ++ L   E  Q+Q  LG+F +YMQ+     F QE
Sbjct:   54 KVRRVGQDGQYFIHYQGWSKKWDRWVHCSLLLKEGPAADKMSKKLMAEEQQRQETAARLKREARADEKSSQEKKKARIDHQRDVEAPAQGTFELKLPLPFTLKKKLVEDWERITQTSPGQVVPLPRTPCVKGIIDEYLESKKERSSSQNHQRLTELFGGLRTYFDAALPITLLYRQERAQYYQYVQDHPDATMSEVYGAEHLLRLFTKLPQILGRARLASVEAAQLQTNLGEFFKYMQRQATDLFTQE 301          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A1R3GEW0_COCAP (MRG family protein (Fragment) n=3 Tax=Malvaceae TaxID=3629 RepID=A0A1R3GEW0_COCAP)

HSP 1 Score: 171 bits (432), Expect = 1.090e-48
Identity = 103/261 (39.46%), Postives = 148/261 (56.70%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKAKKARIDIK------KDTEDDTGVAE--------VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            V K +    ++ YF+HY+GWN  WD+WV    LMK   E    QK L K                 PK    AK+ + ++K      K  + D+GV +        VK+ +P TLKKQL+ DWE VT   + VKLPR     ++L+ Y+E + K+      +   E++ G+R YFDKALP+MLLY++ER QY+  V      SPS IYGAEHLLR+FV+ P+LLA   + +  +T++Q+ L DFL+++QKN + FF+  YE
Sbjct:    1 VQKAELRKKEWKYFVHYLGWNKNWDEWVGADRLMKHTEENVMKQKALDKKQGVDKSSKSGRSSQTKPKSSADAKEDKEEVKNTVPKGKKRKSDSGVEKDNSSVEKLVKIQIPSTLKKQLVDDWEFVTQQDKLVKLPRTPNVDDILTKYLEYRSKKDGTMTDSIG-EILKGIRCYFDKALPVMLLYKKERQQYNEVVVD--DVSPSTIYGAEHLLRLFVKFPELLAYVNIEEETLTRLQQKLMDFLKFLQKNQSSFFLSAYE 258          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: UPI000B78B1B0 (protein MRG1-like isoform X1 n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B1B0)

HSP 1 Score: 170 bits (430), Expect = 7.650e-48
Identity = 103/258 (39.92%), Postives = 150/258 (58.14%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKAKKARIDIK---------KDTEDDTGVAE--VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            + K +    ++ YF+HY+GWN  WD+WV    LMK   E  + Q+ L+K                 PK    AK  + D+K         K  E D+  AE  VK+ +P  LKKQL+ DWE VT   + VKLPR  T  +VL  Y+E + ++      + A E+++G+R YFDKALPLMLLY++ER QY   V  +   SPS +YGA+HLLR+FV++P+LLA   + +  +T++Q+ L DFLR++QKN + FF+  Y+
Sbjct:   53 IQKAEIRKKEWRYFVHYLGWNKNWDEWVGMDRLMKITEENIQKQQALEKKQGADKHHRSGRSAQTKPKGSTDAKVDKEDVKSNVAKGKKRKGDEKDSASAEKLVKIQIPSPLKKQLVDDWEFVTQKDKLVKLPRSPTVDDVLKKYLEYRTRKDGTITDSIA-EILNGLRCYFDKALPLMLLYKKERQQYHEAVTNNA--SPSTVYGADHLLRLFVKLPELLAYVNMEEETMTRLQQKLVDFLRFLQKNQSTFFLSVYD 307          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A6P8DR80_PUNGR (protein MRG1 isoform X1 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DR80_PUNGR)

HSP 1 Score: 169 bits (429), Expect = 1.050e-47
Identity = 106/261 (40.61%), Postives = 149/261 (57.09%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKAKKARIDIKKD------------TEDDTGVAE--VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            V K +   +++ YF+HY+GWN  WD+WV    L+K   E    Q+ L+K                 PK    AK  + D+K              TE D  VAE  VK+ +P TLKKQL+ DWE +T   + VKLPR  T  ++L++Y+E K K+      +   E++ G+R YFDKALP MLLYR+ER QY   V      SPS IYGAEHLLR+FV++P+LL Q  + +  +T++Q+ L DFL+++QKN + FF+  YE
Sbjct:   47 VQKTEVRKNEWRYFVHYLGWNKNWDEWVGADRLLKYTEENIMKQQALEKKQGIDRNPKSGRLTQHKPKISADAKVDKEDLKSIATKGKKRKNDAVTEKDNVVAEKLVKIQIPSTLKKQLVDDWEFITQRDKLVKLPRSPTVDDILTSYLEHKSKKDATVTDS-VGEVLKGLRCYFDKALPAMLLYRKERQQYKEAVAA--TVSPSTIYGAEHLLRLFVKLPELLVQVNIEEETLTRLQQKLVDFLKFLQKNQSTFFLSAYE 304          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A072UR24_MEDTR (Chromatin-binding protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UR24_MEDTR)

HSP 1 Score: 169 bits (428), Expect = 1.440e-47
Identity = 103/261 (39.46%), Postives = 152/261 (58.24%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKAKKARIDIK------KDTEDDTGVAE--------VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            V K +   +++ YF+HY+GWN  WD+WV ES LMK   E    Q+ L K               V  K    AK  + DIK      K  + D+GV +         K+ +P  LKKQL+ DW+ V    + VKLPR  T  E+L+ Y+E K K+ + +  +   E++ G+RLYFDKALP+ML+Y++ER Q +  V  +   SPS IYGAEHLLR+FV++P+LL+   + +  ++++Q+ L DFLR++QKN + FF+  YE
Sbjct:   48 VQKAEIRKNEWRYFVHYLGWNKNWDEWVGESRLMKHNDENVVKQRALDKKQGVDKNVKSGRSAQVKAKSSADAKVEKEDIKNIASKGKKRKIDSGVEKGSGNDEKLFKIQIPAPLKKQLVDDWDFVNQQDKLVKLPRSPTVDEILTKYLEYKSKKDSVEADSTG-EILKGIRLYFDKALPMMLVYKKERKQCNEAVVDNV--SPSTIYGAEHLLRLFVKLPELLSYVNIEEETLSRLQQKLLDFLRFLQKNQSTFFLSAYE 305          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: UPI00053F30A2 (protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F30A2)

HSP 1 Score: 168 bits (426), Expect = 2.730e-47
Identity = 101/255 (39.61%), Postives = 150/255 (58.82%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPK------EDQKAKKARIDIKKDTEDDTGVAE--VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            V K++    ++ YF+HY+GWN  WD+WV    LMK   E  + Q  L+K                 PK      E+ K   A+   +K  E ++  AE  VK+ MP TLKKQL+ DWE V+   + VKLPR     ++L  Y+E + ++      + A E+++G+R YFDKALPLMLLY++ER QY   V  +   SPS +YGAEHLLR+FV++P+LLA   + +  +T++Q+ L DF+R++QKN + FF+  Y+
Sbjct:   52 VQKIETRKKEWRYFVHYLGWNKNWDEWVSADRLMKITDENIQKQLALEKKLGADKHHKSGRSAQTKPKDAKLDKEETKNNVAKGKKRKTDEKESISAEKLVKIQMPSTLKKQLVDDWEFVSQKDKLVKLPRSPNVDDILKKYLEYRTRKDGTMTDSIA-EILNGLRCYFDKALPLMLLYKKERQQYHEAVTNNV--SPSTVYGAEHLLRLFVKLPELLAYVNMEEETMTRLQQKLVDFIRFLQKNQSTFFLSVYD 303          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A833UGK4_JUGRE (MRG domain-containing protein n=13 Tax=Fagales TaxID=3502 RepID=A0A833UGK4_JUGRE)

HSP 1 Score: 169 bits (427), Expect = 4.220e-47
Identity = 101/261 (38.70%), Postives = 149/261 (57.09%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKAKKARIDIK------KDTEDDTGVAE--------VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            V K +    ++ YF+HY+GWN  WD+WV    LMK   E    Q+ L K                 PK    AK  + D+K      K  + D+G  +        V++ +P TL+KQL+ DWE VT   + VKLPR  T  ++L+ Y+E + K+      +   E++ G+R YFDKALP+MLLY++ER QY   V  +   SPS IYGAEHLLR+FV++P+LLA   + +  +T++Q+ L DFL+++QKNH+ FF+  Y+
Sbjct:   77 VQKAERRKKEWRYFVHYLGWNKNWDEWVGVDRLMKHTEENVMKQQALDKKQGVDKNPKSGRSAQTKPKSSADAKLDKEDLKNNVSKGKKRKSDSGAEKDNVSLEKLVRIQIPSTLRKQLVDDWEFVTQQDKLVKLPRSPTVDDILTKYLEYRSKKDGMMTDSIG-EILKGIRCYFDKALPVMLLYKKERKQYHEAVVDNV--SPSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRLQQKLLDFLKFLQKNHSTFFLSAYD 334          
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Match: A0A7N0UDN3_KALFE (MRG domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UDN3_KALFE)

HSP 1 Score: 168 bits (425), Expect = 4.260e-47
Identity = 102/261 (39.08%), Postives = 151/261 (57.85%), Query Frame = 1
Query:    1 VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKXXXXXXXXXXXXXXDVVPKEDQKAKKARIDIK------KDTEDDTGVAE--------VKVAMPFTLKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARAQELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLLRVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYE 741
            V K +    ++ YF+HY+GWN  WD+WV    L+K   E    Q+ L+K                 PK   +AK  + D K      K  + D+ V +        VK+ MP +L+KQL+ DWE VT   + VKLPR  T  E+L+ Y+E K K+  PQ +    E++ GVR YFDKAL LMLLY++ERSQ++  + ++   SPS +YGAEHLLR+FV++P+LL+   + Q    ++Q+ L DFL+++QK+ + FF+  YE
Sbjct:   50 VQKTEFRKKEWKYFVHYLGWNKSWDEWVGADRLLKHTEENVLKQQALEKKQGVDKNTKSGRGGHTKPKSSAEAKADKEDNKTHVSRGKKRKSDSAVEKDNASVEKPVKIQMPSSLRKQLVEDWESVTQQNKLVKLPRSPTVDEILTKYLEYKSKKD-PQSADAVGEILKGVRCYFDKALALMLLYKKERSQFNEAIAENV--SPSTVYGAEHLLRLFVKLPELLSFLNIDQETSMRLQQRLLDFLKFLQKHQSTFFLSAYE 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16250.3593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5X7_9PHAE4.180e-12371.05MRG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CM09_9STRA1.490e-6344.57Putative chromatin binding protein n=1 Tax=Tribone... [more]
A0A7S2RY99_9STRA2.610e-5642.74Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1R3GEW0_COCAP1.090e-4839.46MRG family protein (Fragment) n=3 Tax=Malvaceae Ta... [more]
UPI000B78B1B07.650e-4839.92protein MRG1-like isoform X1 n=5 Tax=Chenopodium q... [more]
A0A6P8DR80_PUNGR1.050e-4740.61protein MRG1 isoform X1 n=3 Tax=Punica granatum Ta... [more]
A0A072UR24_MEDTR1.440e-4739.46Chromatin-binding protein n=1 Tax=Medicago truncat... [more]
UPI00053F30A22.730e-4739.61protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris... [more]
A0A833UGK4_JUGRE4.220e-4738.70MRG domain-containing protein n=13 Tax=Fagales Tax... [more]
A0A7N0UDN3_KALFE4.260e-4739.08MRG domain-containing protein n=1 Tax=Kalanchoe fe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16250contigH-paniculata_contig16250:1083..2755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.6
Seed ortholog evalue2.3e-99
Seed eggNOG ortholog2880.D7FRM2
KEGG koko:K11339
Hectar predicted targeting categoryother localisation
EggNOG free text desc.histone H2A acetylation
EggNOG OGsKOG3001@1,KOG3001@2759
Ec32 ortholog descriptionMRG and Chromo domain protein
Ec32 orthologEc-12_002520.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03400
Exons5
Model size763
Cds size762
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16250.3593.1prot_H-paniculata_contig16250.3593.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16250 1083..2755 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929297.3818564-CDS-H-paniculata_contig16250:1082..12441622929297.3818564-CDS-H-paniculata_contig16250:1082..1244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 1083..1244 +
1691480805.3851645-CDS-H-paniculata_contig16250:1082..12441691480805.3851645-CDS-H-paniculata_contig16250:1082..1244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 1083..1244 +
1622929297.399866-CDS-H-paniculata_contig16250:1441..15311622929297.399866-CDS-H-paniculata_contig16250:1441..1531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 1442..1531 +
1691480805.396678-CDS-H-paniculata_contig16250:1441..15311691480805.396678-CDS-H-paniculata_contig16250:1441..1531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 1442..1531 +
1622929297.4140038-CDS-H-paniculata_contig16250:1779..20161622929297.4140038-CDS-H-paniculata_contig16250:1779..2016Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 1780..2016 +
1691480805.4087572-CDS-H-paniculata_contig16250:1779..20161691480805.4087572-CDS-H-paniculata_contig16250:1779..2016Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 1780..2016 +
1622929297.4319413-CDS-H-paniculata_contig16250:2181..23021622929297.4319413-CDS-H-paniculata_contig16250:2181..2302Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 2182..2302 +
1691480805.4193375-CDS-H-paniculata_contig16250:2181..23021691480805.4193375-CDS-H-paniculata_contig16250:2181..2302Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 2182..2302 +
1622929297.4429448-CDS-H-paniculata_contig16250:2603..27551622929297.4429448-CDS-H-paniculata_contig16250:2603..2755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 2604..2755 +
1691480805.4272263-CDS-H-paniculata_contig16250:2603..27551691480805.4272263-CDS-H-paniculata_contig16250:2603..2755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16250 2604..2755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16250.3593.1

>prot_H-paniculata_contig16250.3593.1 ID=prot_H-paniculata_contig16250.3593.1|Name=mRNA_H-paniculata_contig16250.3593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp
VIKLKPSGDQFTYFLHYMGWNSRWDKWVIESDLMKEGAEAEEMQKQLKKE
KMDKAAKAKRKEKDVVPKEDQKAKKARIDIKKDTEDDTGVAEVKVAMPFT
LKKQLIMDWERVTHDRRFVKLPRELTAAEVLSNYVETKVKRSTPQQSARA
QELMDGVRLYFDKALPLMLLYRQERSQYDVTVEKHPGKSPSEIYGAEHLL
RVFVRIPQLLAQSALTQPEVTQVQKLLGDFLRYMQKNHAQFFVQEYEDRE
PVRP
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mRNA from alignment at H-paniculata_contig16250:1083..2755+

Legend: polypeptideCDS
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>mRNA_H-paniculata_contig16250.3593.1 ID=mRNA_H-paniculata_contig16250.3593.1|Name=mRNA_H-paniculata_contig16250.3593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1673bp|location=Sequence derived from alignment at H-paniculata_contig16250:1083..2755+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGATCAAGTTGAAGCCATCCGGGGATCAATTCACATACTTCTTGCACTA TATGGGATGGAACAGTCGGTGGGACAAGTGGGTGATCGAGTCTGATCTGA TGAAAGAGGGTGCAGAGGCGGAAGAGATGCAGAAACAGCTCAAGAAAGAA AAAATGGACAAGGTGTGAGGAGGTAGTCCGCTGTGGTTGCCCAGAATCCG CCCTGCGAGAAATTTCCAATTGATACTTCGACCCAGCATCGTTGTGCAGA GGTCAAGCGTTCGGTTTTGTCATTCTTGTTCCCGACATACACTTGCGTAT CACCCTTTCTACTGTAATTTCAGTTGTTTTCGTCGTATGTGTTGTGCTGT GATCGATAGGCGGCGAAGGCAAAGCGGAAGGAGAAGGATGTTGTGCCCAA GGAAGACCAAAAGGCTAAGAAGGCTCGCATTGATATCAAGAAGGATACGG TGCGTCACGTGTGCTATATGACTTGTTATGCCGTTCGTTGGTCCACCTTT CCCCCACGCTGAAAGCTGCAGCCTGTGAACGGCAGGAGCCGGGTTCCACG AGAGCAGAATCGGGTCAAAGAACCGCGCGAGCGGCAGATATTCCTAATTT GGGAGATAAAACTCGAACTTTGTATCTCTCATAGGCAACTGTTCATGTTG CCACGAGAGTACGTTCCTTCGCTCTGCTTTAATTTGCTTCTGTGCAGGAG GATGACACGGGAGTTGCCGAAGTTAAAGTTGCGATGCCTTTCACGCTCAA GAAACAGCTGATTATGGATTGGGAGCGCGTTACGCACGACAGGAGATTTG TCAAGCTGCCGCGCGAGCTAACAGCTGCAGAGGTGCTCTCCAACTACGTT GAAACCAAAGTCAAGCGATCCACACCCCAGCAGAGTGCACGTGCTCAGGA GTTGATGGACGGTGTGCGGCTCTACTTCGACAAGGTAAGGGTGGAGCAGG GCCAGTCATGGCAGTAAAAACTATCGTAATACCGTGTTACGTTTTATGAA GGGTTGAAACTGTTGAATCAGGGATTCGTACCCCAACCCTGCTGATTATC CACCTGCGCTTGCCTTGTAAATCTCGTCTCGTCCATCGCGCCGGGGTAGG CGTTGCCTCTGATGCTGCTCTATCGGCAAGAGCGATCGCAGTATGACGTT ACGGTGGAGAAGCACCCCGGCAAAAGCCCCAGCGAAATCTACGGAGCAGA GCACCTCCTACGCGTCTTCGGTAAGCGCATCATTGCGGCACAAATATGTG TGCTGTACATGCTATACAACGATGCATGTTTTATCAAGGTACGAAGCACG GTTATAAGTACCTTGGGCCAGAAAAGTTTAACATTCAACAATAATTTGAT CTTTGCTGCGACGGTGCACTCGGGCGGGTTCGGGTTCGACTGCAGTCGTC ATTGGTCTTCGTCTTATTTCGATGAAAGTTCGTGTCTGCAACGATCCTTT GTCGCCGTGGCGTTTTGTATTATTGCCGGGTGCTACCTCGTCTGGTTGTG CCTCCTGACATCCGTTTGCAGTGCGAATCCCGCAGCTGCTGGCGCAATCG GCTCTCACTCAGCCGGAAGTTACGCAAGTGCAAAAGCTGTTGGGGGACTT TCTTCGTTACATGCAGAAGAACCACGCGCAGTTTTTTGTGCAGGAGTACG AGGATCGAGAACCGGTGCGTCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig16250:1083..2755+

>mRNA_H-paniculata_contig16250.3593.1 ID=mRNA_H-paniculata_contig16250.3593.1|Name=mRNA_H-paniculata_contig16250.3593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at H-paniculata_contig16250:1083..2755+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGATCAAGTTGAAGCCATCCGGGGATCAATTCACATACTTCTTGCACTA
TATGGGATGGAACAGTCGGTGGGACAAGTGGGTGATCGAGTCTGATCTGA
TGAAAGAGGGTGCAGAGGCGGAAGAGATGCAGAAACAGCTCAAGAAAGAA
AAAATGGACAAGGTGATCAAGTTGAAGCCATCCGGGGATCAATTCACATA
CTTCTTGCACTATATGGGATGGAACAGTCGGTGGGACAAGTGGGTGATCG
AGTCTGATCTGATGAAAGAGGGTGCAGAGGCGGAAGAGATGCAGAAACAG
CTCAAGAAAGAAAAAATGGACAAGGCGGCGAAGGCAAAGCGGAAGGAGAA
GGATGTTGTGCCCAAGGAAGACCAAAAGGCTAAGAAGGCTCGCATTGATA
TCAAGAAGGATACGGCGGCGAAGGCAAAGCGGAAGGAGAAGGATGTTGTG
CCCAAGGAAGACCAAAAGGCTAAGAAGGCTCGCATTGATATCAAGAAGGA
TACGGAGGATGACACGGGAGTTGCCGAAGTTAAAGTTGCGATGCCTTTCA
CGCTCAAGAAACAGCTGATTATGGATTGGGAGCGCGTTACGCACGACAGG
AGATTTGTCAAGCTGCCGCGCGAGCTAACAGCTGCAGAGGTGCTCTCCAA
CTACGTTGAAACCAAAGTCAAGCGATCCACACCCCAGCAGAGTGCACGTG
CTCAGGAGTTGATGGACGGTGTGCGGCTCTACTTCGACAAGGAGGATGAC
ACGGGAGTTGCCGAAGTTAAAGTTGCGATGCCTTTCACGCTCAAGAAACA
GCTGATTATGGATTGGGAGCGCGTTACGCACGACAGGAGATTTGTCAAGC
TGCCGCGCGAGCTAACAGCTGCAGAGGTGCTCTCCAACTACGTTGAAACC
AAAGTCAAGCGATCCACACCCCAGCAGAGTGCACGTGCTCAGGAGTTGAT
GGACGGTGTGCGGCTCTACTTCGACAAGGCGTTGCCTCTGATGCTGCTCT
ATCGGCAAGAGCGATCGCAGTATGACGTTACGGTGGAGAAGCACCCCGGC
AAAAGCCCCAGCGAAATCTACGGAGCAGAGCACCTCCTACGCGTCTTCGG
CGTTGCCTCTGATGCTGCTCTATCGGCAAGAGCGATCGCAGTATGACGTT
ACGGTGGAGAAGCACCCCGGCAAAAGCCCCAGCGAAATCTACGGAGCAGA
GCACCTCCTACGCGTCTTCGTGCGAATCCCGCAGCTGCTGGCGCAATCGG
CTCTCACTCAGCCGGAAGTTACGCAAGTGCAAAAGCTGTTGGGGGACTTT
CTTCGTTACATGCAGAAGAACCACGCGCAGTTTTTTGTGCAGGAGTACGA
GGATCGAGAACCGGTGCGTCCCTGCGAATCCCGCAGCTGCTGGCGCAATC
GGCTCTCACTCAGCCGGAAGTTACGCAAGTGCAAAAGCTGTTGGGGGACT
TTCTTCGTTACATGCAGAAGAACCACGCGCAGTTTTTTGTGCAGGAGTAC
GAGGATCGAGAACCGGTGCGTCCC
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