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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1481 |
| Cds size | 1218 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1621.3574.1 >prot_H-paniculata_contig1621.3574.1 ID=prot_H-paniculata_contig1621.3574.1|Name=mRNA_H-paniculata_contig1621.3574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=406bp
MSAPVDGGAALGDSRGLNYEDGGGARLGDAGVAAGAAPKKVGGLRRRGVK
GGVGTGSTKDSDNEEAAITDAEADSKCSASPASSEGDPSNDEEESTVSIG
LIPGAGDGVNPHASTPMVSPVVVSSCPDVRNADKLIERGVGQAATSSGTK
VQTRKRHRGGGRLDYVVGQEEMKDNNDQEDGEDVNASDGTVLKECGASEC
KDGPLQVDKPGRRGHGNPAASAGSHRLLGRAASARERSGRSGLPVGEKEG
KERGKEENNCSPTSVGASRGTMVTEAAGLRARQADRDQQDTDGTADDDRI
HTAGSVALRDTHESGVGSAAAAAAAAGEDDNTDAESGFPCPCCPATFSTS
EELILHVEIHVSDDLLGSADSTVPGRGEGSGASTAASSGADGGGADPDAH
GGGAAA back to topmRNA from alignment at H-paniculata_contig1621:12392..16908- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1621.3574.1 ID=mRNA_H-paniculata_contig1621.3574.1|Name=mRNA_H-paniculata_contig1621.3574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4517bp|location=Sequence derived from alignment at H-paniculata_contig1621:12392..16908- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCTTGTTTGGCTTTGGTGGGGTGTGGAGGGGAGTACTGGTTGTAAAGAA
TCGGCAAGTGAGGAATCGAACCGCCTTCACGCTGACCGTATCTCCGATAT
CCGGACATACGTATTGATCTGTACGCTCTGGTGTCAGCCCTTTTGCCCGA
TAGGGAAAGGCCTGTACGAGAGAGAGATAAAAGGCGGAAACCGCAGCCTC
CAGGAAGCATCTGATTCTGAAGGTATGTATATGGGCTGGCTTAGGTGCTC
CAGTCAGTCGACCCCACCGTATAGTCTACTACTGTTGGCCGGCCGATGCT
CCTAGTTGTGTGTGGATGAGAGAAGAACGAACAGAGCTAACCATTTGGTT
TGTTACAAAAATCATAAATTTCGGACACGCCTTCGCTTCTTTTTGGTTAA
AAAAGTGAATCGGGGGCTAACTAGATTCCTGTGATGTGGTCACATGTTCC
TGGCGTTCTCTCAGCGTTCAGTGACGTCCTCTGGTTTCGAAGAAGGCTGC
TGCTATAGTCAGAAAACTCTGCGGCCGTGATCATTCTGACGTGAATCATG
GATCCCTTCCCGAGGAGAGTGCCGTTGGGGGCTTTCCCTCATGGCCGCCG
CAATCACTAGACGGTAGCTGGCGATTATAGGTTGGTACATCCGCAAGCGG
CGACCACGCTGTGCGGTCACCGAGCTGATGCCACCGACGCGAACTGTTAT
AGGTTGCTAATTTTTTAGCCGGACATGATCATAGGATCCAACCTCATGTC
TGGCGTATAGAAACTGCACGAAAAACGAGAAGCCAGAAGTCAAAAGGATT
CACAGTTTGACTTGCCAAGTCACTGCGTCTCAACCAACTACTGTGGAGTA
CTTGCAATTTGTTCGCTAAAATCTACATCTCGCCCCGACTTGATCTCATA
CTACTTAGCCTTGCAACTGCATGCTACTCGTGTATTTTGAACAGAGGGGC
TAGACAGTGCCTGAGCTCTACAAAAACGCGACCCAAAACTTGACAAGTCA
GTAAGCAACACTCCCAAGGTCACAGCATTATCTTGCGTTCATCCCACACA
ACGACCAAGCCCATATCGCGCCATTAATCGTGCTCTCCTAGTGGGATGTA
GCATAGCATGGGGTCCTCTTTTCCAAAGGATAATTACGATATCCTGCCTG
CATGCCAACATACAATGTACAAGACAGGTCATGTCAAGTATTTGGGTTGC
GGGGCATATGACACGTCCGGGGATTCGAACCGACTAGTGATGTATATGCA
GTCAGTGTGAAGATAGGGCACGCACAGACTGCCCGATGAGCTACCGTCGA
CCATGGTCACGAAAACAATCAAGGACAAATTTATTCCGAAATGGTCATCA
TCTCCTTTTACCCTTGTGGCGCCGAATCCCATGAAATCCTCCGTGATCTA
ATCACTACAGTATTGTAGCTCAAAAACCGTCTGGAAAACAAAGCCTGAGA
CAAGATTGATTATGGAAATAGAGAGTCGCCGCTATTCAGATAGACAGTCG
AACATATACTGCACAGACAGTTATGGTTGGACCCTCCCAACCACTGTAGC
ACCCGACTTTTTATTCGCGGATACCTTTTTTGTTCTCAAAATGCCTCTTT
TAAAGGCGCTCGAAGGATTTAAAACTACTCCCTTCCTCGTTAATGGGGAT
AAACTTGGTGACCGTATTGATCCCACTTCTAAATAGCTATCTCTGTCATA
AACCTTTCGGTAACACCCCGAGCCTCCCCTCTCCTTCCCAACCCTGCGGT
ATCTAGTATTCGATGTAATCGTGTGCCCTTTTTGACCGATGGTCTACCCA
CTTGAGCGCATCCGAAAACTCCAAGTGATGGCATTGTGCACCTATCTACT
ACTGAACGCGACCGCTTGTCACCTATCCTCGTATATACGGGACTGTGGCA
CCCCGACCATACGTACCCCTTCCTCTTCAAGTTCAAACCACCGAGAGCTG
GTTCCAAGTGAGGAACATCGATGTCGGCGCCTGTGGATGGCGGCGCAGCG
CTCGGAGACAGTCGTGGTTTAAATTACGAGGATGGCGGGGGTGCAAGGCT
TGGGGATGCAGGCGTGGCCGCCGGCGCTGCTCCTAAAAAGGTTGGTGGTC
TTCGGCGACGTGGGGTAAAGGGTGGGGTGGGGACGGGGAGCACGAAGGAC
TCCGACAACGAAGAGGCAAGTGAACGAAGTGGATGTACGTTTTGCTGTTT
GTGCCGAAGCTGCGTTGGGATTCGATCCGTGGGGTCACGGTTGCCTGCAG
TTAGTACTACTCTGCATAGTAGACAGCATGAGGCTCTGAATGGTATTTCT
GTATACGCGCTGATCGTGTCTTGTTCTGTCGTTTTGTTTGGTTCTCTTAA
CGGTATCGCGTCTAGTTCTTCCGAGGGAAGGGGGGGCTCACATCTATGAT
GTCGCTGATTTTGGCATCGTATTGTACACGGTACAATGCGAATCGCAAGC
GGCTGGACCTGTTGTCTGGGTCTGTCGCTGCCACTAACTACAGTACAGTG
ATTTTTCTTGCGCCCATGACCGACACTACCAGCCAGCACTCAACACGGGT
AGATCCTCCCTTTCAAAGCAACTGGTCTGACCTTCAACTTTGACTCGTGG
TAAAAATACCACAATAACTTGACAGAAAGAACATTTTTCCAGAAGGCCCA
ATTACCAATTGTGTACTACATTTTGTATGTTCTGACATCAGCTATGGCAG
GCTGCCTGTTGCTGCAATGTCTGTGGGCGGCACATACGCACTGGATATTT
CTCACTAAGGCACTTTCGGGAGATGCTGGTACCTGCAGCGTCTCTCCCTC
TCCTCATTGTGTCACCGTTAGCGCAGTAGTATCACCGCGCAAATAAATAT
GGTTGTGCAGCAGTACAAACAGTACATCAACTGTACTTCATGCATCCTAC
CATCTGCTTTTTCCGTGGCCGTGCGCAACTGTGCGGAGTATATCATGCTG
TTGGCGCTGTCCAGTTGGCTGTCACCGTTCGGTTGAACCAACGTGTGTTG
TGCAGTGTTCCAGCTGTACCACATTTACATCAACTGCCAAGCACATGGCG
TTGCCGCTGGAGCAAACCAGCCCTCAAGGTGCAATGATTGACATGAAAAT
GATGAGATTTGACCCCTTTTTTGCTCCTGGGGTCACATGATTCCATTCAT
TTCGTGGTATATACATCACAAAACGGTACGCCCCCCGTGTCTTGTATCAT
GCGACTGTGAGATTTCGTGTGACACGAGATGTCCCCAGCCCCCCAGGAAT
CAAAGAGTTAACCCTGAAAAAACACGTTGGGCATCTTCATTAGTTTATCA
CGCTGATATACACGCGCATACCACAAACAAACCCCTACTTCACCCTATAT
GCGCACGGCGCAAACCATCTTAATAACAAAGTTACCCCCCCCCCTCCGAG
TACCGTATCAGCATCATACAACATTGAATTGTTCTGAAACGAGCTCTTCC
GCCGGCGCGTTCTTTCCTCTCCCTGCACGAACCGTTTACCGCAGGCGGCG
ATAACGGACGCGGAAGCCGACAGTAAATGCTCCGCAAGTCCCGCCTCTTC
GGAAGGAGACCCTAGCAACGACGAGGAGGAGAGCACCGTGTCCATCGGGC
TTATCCCTGGCGCCGGGGACGGTGTCAACCCTCACGCCAGCACGCCGATG
GTGTCGCCTGTGGTCGTCAGTTCGTGTCCCGACGTTCGTAATGCAGACAA
ACTTATCGAAAGGGGGGTAGGGCAAGCTGCCACTTCTTCGGGTACGAAAG
TTCAAACGCGAAAGCGACACAGAGGGGGGGGTCGGCTGGACTACGTGGTG
GGGCAAGAGGAGATGAAAGACAACAACGATCAGGAAGATGGCGAGGATGT
GAACGCTAGCGACGGCACCGTTCTTAAGGAGTGTGGCGCGTCGGAATGCA
AGGACGGTCCGTTGCAGGTTGACAAACCCGGCCGGAGGGGGCATGGCAAC
CCTGCCGCCTCGGCCGGTAGTCATCGCTTGTTGGGTCGGGCTGCGAGCGC
GCGCGAGCGTTCCGGGCGTTCCGGTTTACCCGTGGGAGAGAAAGAAGGAA
AAGAAAGAGGGAAGGAAGAAAACAATTGCTCACCGACTTCCGTCGGTGCT
AGCCGCGGAACGATGGTCACCGAAGCTGCGGGCTTGCGAGCCCGACAAGC
AGATAGGGATCAGCAAGACACTGACGGAACAGCAGACGACGACAGAATAC
ACACGGCAGGCTCGGTAGCTCTGCGAGATACGCATGAGTCCGGCGTCGGG
TCTGCGGCTGCCGCTGCTGCTGCCGCCGGTGAAGACGACAACACGGACGC
GGAGAGCGGATTTCCGTGTCCCTGCTGCCCCGCAACTTTTTCCACTTCGG
AAGAGCTGATTCTGCACGTTGAAATTCACGTGTCCGATGATCTCCTCGGT
TCCGCCGATTCGACTGTACCCGGTAGAGGTGAGGGGTCTGGAGCGTCGAC
GGCCGCAAGTAGCGGTGCGGACGGCGGCGGGGCTGACCCAGACGCTCACG
GGGGGGGAGCGGCGGCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1621:12392..16908- >mRNA_H-paniculata_contig1621.3574.1 ID=mRNA_H-paniculata_contig1621.3574.1|Name=mRNA_H-paniculata_contig1621.3574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2436bp|location=Sequence derived from alignment at H-paniculata_contig1621:12392..16908- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGCGCCTGTGGATGGCGGCGCAGCGCTCGGAGACAGTCGTGGTTT
AAATTACGAGGATGGCGGGGGTGCAAGGCTTGGGGATGCAGGCGTGGCCG
CCGGCGCTGCTCCTAAAAAGGTTGGTGGTCTTCGGCGACGTGGGGTAAAG
GGTGGGGTGGGGACGGGGAGCACGAAGGACTCCGACAACGAAGAGATGTC
GGCGCCTGTGGATGGCGGCGCAGCGCTCGGAGACAGTCGTGGTTTAAATT
ACGAGGATGGCGGGGGTGCAAGGCTTGGGGATGCAGGCGTGGCCGCCGGC
GCTGCTCCTAAAAAGGTTGGTGGTCTTCGGCGACGTGGGGTAAAGGGTGG
GGTGGGGACGGGGAGCACGAAGGACTCCGACAACGAAGAGGCGGCGATAA
CGGACGCGGAAGCCGACAGTAAATGCTCCGCAAGTCCCGCCTCTTCGGAA
GGAGACCCTAGCAACGACGAGGAGGAGAGCACCGTGTCCATCGGGCTTAT
CCCTGGCGCCGGGGACGGTGTCAACCCTCACGCCAGCACGCCGATGGTGT
CGCCTGTGGTCGTCAGTTCGTGTCCCGACGTTCGTAATGCAGACAAACTT
ATCGAAAGGGGGGTAGGGCAAGCTGCCACTTCTTCGGGTACGAAAGTTCA
AACGCGAAAGCGACACAGAGGGGGGGGTCGGCTGGACTACGTGGTGGGGC
AAGAGGAGATGAAAGACAACAACGATCAGGAAGATGGCGAGGATGTGAAC
GCTAGCGACGGCACCGTTCTTAAGGAGTGTGGCGCGTCGGAATGCAAGGA
CGGTCCGTTGCAGGTTGACAAACCCGGCCGGAGGGGGCATGGCAACCCTG
CCGCCTCGGCCGGTAGTCATCGCTTGTTGGGTCGGGCTGCGAGCGCGCGC
GAGCGTTCCGGGCGTTCCGGTTTACCCGTGGGAGAGAAAGAAGGAAAAGA
AAGAGGGAAGGAAGAAAACAATTGCTCACCGACTTCCGTCGGTGCTAGCC
GCGGAACGATGGTCACCGAAGCTGCGGGCTTGCGAGCCCGACAAGCAGAT
AGGGATCAGCAAGACACTGACGGAACAGCAGACGACGACAGAATACACAC
GGCAGGCTCGGTAGCTCTGCGAGATACGCATGAGTCCGGCGTCGGGTCTG
CGGCTGCCGCTGCTGCTGCCGCCGGTGAAGACGACAACACGGACGCGGAG
AGCGGATTTCCGTGTCCCTGCTGCCCCGCAACTTTTTCCACTTCGGAAGA
GCTGATTCTGCACGTTGAAATTCACGTGTCCGATGATCTCCTCGGTTCCG
CCGATTCGACTGTACCCGGTAGAGGTGAGGGGTCTGGAGCGTCGACGGCC
GCAAGTAGCGGTGCGGACGGCGGCGGGGCTGACCCAGACGCTCACGGGGG
GGGAGCGGCGGCAGCGGCGATAACGGACGCGGAAGCCGACAGTAAATGCT
CCGCAAGTCCCGCCTCTTCGGAAGGAGACCCTAGCAACGACGAGGAGGAG
AGCACCGTGTCCATCGGGCTTATCCCTGGCGCCGGGGACGGTGTCAACCC
TCACGCCAGCACGCCGATGGTGTCGCCTGTGGTCGTCAGTTCGTGTCCCG
ACGTTCGTAATGCAGACAAACTTATCGAAAGGGGGGTAGGGCAAGCTGCC
ACTTCTTCGGGTACGAAAGTTCAAACGCGAAAGCGACACAGAGGGGGGGG
TCGGCTGGACTACGTGGTGGGGCAAGAGGAGATGAAAGACAACAACGATC
AGGAAGATGGCGAGGATGTGAACGCTAGCGACGGCACCGTTCTTAAGGAG
TGTGGCGCGTCGGAATGCAAGGACGGTCCGTTGCAGGTTGACAAACCCGG
CCGGAGGGGGCATGGCAACCCTGCCGCCTCGGCCGGTAGTCATCGCTTGT
TGGGTCGGGCTGCGAGCGCGCGCGAGCGTTCCGGGCGTTCCGGTTTACCC
GTGGGAGAGAAAGAAGGAAAAGAAAGAGGGAAGGAAGAAAACAATTGCTC
ACCGACTTCCGTCGGTGCTAGCCGCGGAACGATGGTCACCGAAGCTGCGG
GCTTGCGAGCCCGACAAGCAGATAGGGATCAGCAAGACACTGACGGAACA
GCAGACGACGACAGAATACACACGGCAGGCTCGGTAGCTCTGCGAGATAC
GCATGAGTCCGGCGTCGGGTCTGCGGCTGCCGCTGCTGCTGCCGCCGGTG
AAGACGACAACACGGACGCGGAGAGCGGATTTCCGTGTCCCTGCTGCCCC
GCAACTTTTTCCACTTCGGAAGAGCTGATTCTGCACGTTGAAATTCACGT
GTCCGATGATCTCCTCGGTTCCGCCGATTCGACTGTACCCGGTAGAGGTG
AGGGGTCTGGAGCGTCGACGGCCGCAAGTAGCGGTGCGGACGGCGGCGGG
GCTGACCCAGACGCTCACGGGGGGGGAGCGGCGGCA back to top
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