prot_H-paniculata_contig1621.3574.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1621.3574.1
Unique Nameprot_H-paniculata_contig1621.3574.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length406
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1621.3574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 340..360
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 338..365
score: 9.702

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1621contigH-paniculata_contig1621:12392..14938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1621.3574.1mRNA_H-paniculata_contig1621.3574.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1621 12392..16908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1621.3574.1 ID=prot_H-paniculata_contig1621.3574.1|Name=mRNA_H-paniculata_contig1621.3574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=406bp
MSAPVDGGAALGDSRGLNYEDGGGARLGDAGVAAGAAPKKVGGLRRRGVK
GGVGTGSTKDSDNEEAAITDAEADSKCSASPASSEGDPSNDEEESTVSIG
LIPGAGDGVNPHASTPMVSPVVVSSCPDVRNADKLIERGVGQAATSSGTK
VQTRKRHRGGGRLDYVVGQEEMKDNNDQEDGEDVNASDGTVLKECGASEC
KDGPLQVDKPGRRGHGNPAASAGSHRLLGRAASARERSGRSGLPVGEKEG
KERGKEENNCSPTSVGASRGTMVTEAAGLRARQADRDQQDTDGTADDDRI
HTAGSVALRDTHESGVGSAAAAAAAAGEDDNTDAESGFPCPCCPATFSTS
EELILHVEIHVSDDLLGSADSTVPGRGEGSGASTAASSGADGGGADPDAH
GGGAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type