mRNA_H-paniculata_contig16142.3541.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16142.3541.1
Unique NamemRNA_H-paniculata_contig16142.3541.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A6H5JBE3_9PHAE (PSII_Pbs31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBE3_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 3.430e-66
Identity = 128/194 (65.98%), Postives = 150/194 (77.32%), Query Frame = 1 
Query:   34 MKTVCVALALAGSASAFITPMANVRATAPARSMTMSSQDQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKSGYKGAGDGQGLGSEFDYKNRTPLGTVYQR 615
            MKT CVALAL GS+SAF+ PMANVR T+ + S +++   +PMTR++ L+ +F A A  A AA       FADGAKS ATQ+RARGIYG R+AAL  AV KGD+AA+LAE+N F+LF SG YST K K AEA  LA +V+ AA AGDA ALK SYAA+MKYTE+KSGY GAGDGQG GSEFDYKNRTPLGTVYQR
Sbjct:    1 MKTACVALALLGSSSAFVVPMANVRTTSSS-STSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVA-FADGAKSPATQARARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAEALAKSVVQAAGAGDAKALKDSYAAYMKYTEKKSGYNGAGDGQGFGSEFDYKNRTPLGTVYQR 192
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BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A835ZH21_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH21_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.330e-24
Identity = 87/197 (44.16%), Postives = 121/197 (61.42%), Query Frame = 1 
Query:   34 MKTVCVALALAGSASAFI--TPMANVRATAPARSMTMSSQDQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYS-TTKGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKSGYKGAGDGQGLGSEFDYKNRTPLGTVYQR 615
            MK V V L LA SASAF+   P+A VR+++   +MTMS+   P +R  VL TVF+A AVAAVA        FADGA S AT  RA+GIYG +V +L+ AV  G+  AV AEKNA  L  SG +  ++K  + +A  L +A+ +A +  +A+AL+S+Y   +K  +  +     GD QG  S++D+K RT  GT+Y R
Sbjct:    1 MKAVGV-LCLAASASAFMPAAPLAGVRSSS---AMTMSAA--PESRRAVLQTVFTAAAVAAVA---IPELAFADGAVSEATVQRAKGIYGDKVLSLAGAVKAGNFEAVAAEKNAITLLASGGFGMSSKADKKQAQALKNAIFAAIDTKNAAALQSAYGDLIKLAKIPASTGSGGDTQGYSSDYDWKARTAKGTIYVR 188
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BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: B8CC14_THAPS (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC14_THAPS)

HSP 1 Score: 107 bits (267), Expect = 1.580e-23
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 1 
Query:   49 VALALAGSASAFITPMANVRATAPA-RSMTMSSQDQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKSGYKGAGDGQGLGSEFDYKNRTPLGTVYQR 615
            +AL L  SA+AF        A AP  R+ T  + D+ M  A++  +      + ++A         ADGAKS ATQSRARGIYG R+AAL  AV  GD  AV AEKNAF LF SGA +  K K++EA K  +A+ +A  A DA ALKS+YA +    + K        GQG  +++D+K RT LGT+Y R
Sbjct:    4 IALCLVASAAAF--------APAPVERASTSLNMDRRMATAQIATSAAVLAGLPSLA--------LADGAKSAATQSRARGIYGQRIAALESAVNAGDFGAVAAEKNAFILFNSGAIAD-KSKKSEAVKQTNAIFAAIRAKDAGALKSAYATYKGANDIKVIVADKESGQGYSNDYDFKARTTLGTIYVR 176
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BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A7S2X8Z1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X8Z1_9EUKA)

HSP 1 Score: 98.6 bits (244), Expect = 1.900e-20
Identity = 86/170 (50.59%), Postives = 96/170 (56.47%), Query Frame = 1 
Query:   22 PFLTMKTVCVALALAGSASAFITPMANVRATAPARSMTMSSQDQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYS----TTKGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTE 519
            P LT K V  ALAL G  SAF         +APA  MTMS+Q    TR   L     A  V A A        FADGA S AT  RARG+YG RVAAL DAVAKGD  AVL EKNAF LF SGAY+      + K  EAT   +AVI AA   D +ALK++YA FM+  E
Sbjct:    3 PLLT-KVVIAALALIGFVSAFAP-------SAPAPRMTMSAQ----TRGAFLKNAGIAVGVGASA--LIPSVAFADGAVSSATVQRARGVYGQRVAALKDAVAKGDFGAVLDEKNAFVLFTSGAYAKKSPADREKSKEATAAYTAVIDAASKKDGAALKAAYAKFMEVGE 158
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BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A1Z5JRZ4_FISSO (PSII_Pbs31 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRZ4_FISSO)

HSP 1 Score: 97.8 bits (242), Expect = 5.230e-20
Identity = 79/197 (40.10%), Postives = 111/197 (56.35%), Query Frame = 1 
Query:   34 MKTVCVALALAGSASAFITPMANVRATAPARSMTMSSQDQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGKRAEATKL--ASAVISAAEAGDASALKSSYAAFMKYTE-EKSGYKGAGDGQGLGSEFDYKNRTPLGTVYQR 615
            MK   +  ALA +++A   P  + RA     S +++S D+     ++      AGA AAVAA        ADGA S AT +RARGIYG R+AAL  AV KGD  A++AEKNAF LF SGAY T K K+ +   +   +A+  A +AGD +A+KS+Y +++   +        A  GQG   +FD++ RT  G +Y R
Sbjct:    1 MKFSALVCALAATSAAAFAPAVSERA-----STSLNSVDRRAAFGQI------AGAAAAVAAFPQLAN--ADGAVSAATVNRARGIYGDRIAALKSAVEKGDLDAIVAEKNAFVLFNSGAYPTAKSKQQKKAAIEGTNAIFKAIKAGDKAAVKSAYNSYVAANDISPLPAVDANKGQGYSGDFDFRVRTKAGAIYVR 184
[Close]
BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A7S0JLR9_9EUKA (Hypothetical protein n=1 Tax=Minchinia chitonis TaxID=262233 RepID=A0A7S0JLR9_9EUKA)

HSP 1 Score: 97.4 bits (241), Expect = 6.640e-20
Identity = 78/191 (40.84%), Postives = 103/191 (53.93%), Query Frame = 1 
Query:   55 LALAGSASAFITPMANVRATAPARSMTMSSQDQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTE----EKSGYKGAGDGQGLGSEFDYKNRTPLGTVYQR 615
            +AL  S++A   P  N R T     ++M++ D+         TVF   A AA          FADGA S+AT +R+RGIYG RVA L  AV  GD  AV AEKNAF LF SGAY+  K K+AEA    +A+ +A    D +AL S+Y +++   +    +     G   GQG G + DY+ RT  G VYQR
Sbjct:    4 IALVISSAAAFAPSTNQRQT-----VSMNAVDR--------RTVFGQIAGAAAVVVGAPSIAFADGAVSKATIARSRGIYGSRVADLEAAVNAGDFGAVAAEKNAFILFNSGAYAKNKPKQAEAIAGTNAIFAAIRGKDKAALSSAYKSYIAANDITPMQDVTTSGKNAGQGFGGDNDYRARTKAGAVYQR 181
[Close]
BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: K0R4S8_THAOC (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4S8_THAOC)

HSP 1 Score: 99.0 bits (245), Expect = 1.180e-19
Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = 1 
Query:  190 SAGAVAAVAAXXXXXXXFA--DGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKSGYKGAGDGQGLGSEFDYKNRTPLGTVY 609
            +AG +AA AA        A  DGAKS AT SRARGIYG R+AAL DAV+KGD  AV AEKNAF L+ SGA  T+K K+A A K  +A+ +A    DA ALK +Y  +    +          GQG  +++D+K RT LGT+Y
Sbjct:   35 AAGQIAAGAAVIAGLPNLALADGAKSAATVSRARGIYGQRIAALEDAVSKGDFGAVAAEKNAFILYNSGAI-TSKDKQAAAVKQTNAIFAAIRGKDAGALKKAYGDYKSAQDIAVIVVDKEKGQGYSNDYDFKTRTNLGTIY 175
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BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A7S2S7V4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7V4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.930e-18
Identity = 93/218 (42.66%), Postives = 120/218 (55.05%), Query Frame = 1 
Query:   10 STYQPFLT---MKTVCVALALAGSASAFITPMANVRATAPARSMTMSSQ-----DQPMTRAEVLNTVFSAGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTT-----KGKRAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKSGYKGAGDG--QGLGSEFDYKNRTPL-GTVYQR 615
            S  QP LT    + V + LAL   A  F    A +RA AP RS+ MS++     D  +  A  L  VFS GA AA          FADGA S AT +RARG+YGGR+AALSD+V KGD  AV AEKNAF LF SG Y+       K K+  A    +++  A   GD + +KS+YA FMK  + + GY G      QG  +E+D+K + P  G++Y R
Sbjct:    3 SRIQPQLTTSMFRVVALVLALFSVAHGFAP--APLRA-AP-RSVVMSAEGESRRDMLVKGAGALGVVFS-GASAA----------FADGAVSLATVARARGLYGGRIAALSDSVNKGDLEAVEAEKNAFILFNSGVYARNGPVDRKNKKV-AVAATNSLFDAVSKGDKAGVKSAYAEFMKVADIQPGYSGKDKDFTQGYSTEYDWKYKDPKKGSIYIR 204
[Close]
BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A7S2IG61_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG61_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.040e-17
Identity = 61/127 (48.03%), Postives = 81/127 (63.78%), Query Frame = 1 
Query:  244 ADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGK--RAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKS-GYKGAGDGQGLGSEFDYKNRTPLGTVYQR 615
            ADGA S AT  RARGIYGGR+AAL  AVA GD  AV AEKNAF LF SGAY   K K  +A A +  +++ +A  + D++ALKS+Y +++   +  +     A  GQG  S++DY+ RT  G +Y R
Sbjct:   57 ADGAVSAATVGRARGIYGGRIAALEGAVASGDFGAVAAEKNAFILFNSGAYPGAKNKANKAAAIEGTNSIFAAIRSKDSAALKSAYKSYIAANDISALPAVDANSGQGYCSDYDYRVRTDAGAIYVR 183
[Close]
BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Match: A0A448ZDN4_9STRA (PSII_Pbs31 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDN4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.600e-17
Identity = 73/145 (50.34%), Postives = 93/145 (64.14%), Query Frame = 1 
Query:  193 AGAVAAVAAXXXXXXXFADGAKSRATQSRARGIYGGRVAALSDAVAKGDSAAVLAEKNAFQLFVSGAYSTTKGK--RAEATKLASAVISAAEAGDASALKSSYAAFMKYTEEKSGYKG--AGDGQGLGSEFDYKNRTPLGTVYQR 615
            AG  AA   XXXXXXX ADGA S AT  RA+  YG R+AAL DAV+KGD  AV AEKNAF L+ SGA+  TK K  +A A +  +A+ +A  + DA ALK++YAA+ K T E S Y    A  GQG  S++DY+ +T    ++ R
Sbjct:   40 AGIAAAAGXXXXXXXXLADGAVSAATIQRAKFQYGSRIAALKDAVSKGDFGAVAAEKNAFILYNSGAFPGTKNKDKKAAAIQGTNAIFAAIRSKDAGALKTAYAAYTK-TVELSDYAAISADQGQGYSSDYDYRVKTSQAAIWVR 183
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16142.3541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JBE3_9PHAE3.430e-6665.98PSII_Pbs31 domain-containing protein n=2 Tax=Ectoc... [more]
A0A835ZH21_9STRA2.330e-2444.16Extrinsic protein in photosystem II n=1 Tax=Tribon... [more]
B8CC14_THAPS1.580e-2343.68PSII_Pbs31 domain-containing protein n=1 Tax=Thala... [more]
A0A7S2X8Z1_9EUKA1.900e-2050.59Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A1Z5JRZ4_FISSO5.230e-2040.10PSII_Pbs31 domain-containing protein n=2 Tax=Fistu... [more]
A0A7S0JLR9_9EUKA6.640e-2040.84Hypothetical protein n=1 Tax=Minchinia chitonis Ta... [more]
K0R4S8_THAOC1.180e-1948.59PSII_Pbs31 domain-containing protein n=1 Tax=Thala... [more]
A0A7S2S7V4_9STRA1.930e-1842.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2IG61_9STRA1.040e-1748.03Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A448ZDN4_9STRA3.600e-1750.34PSII_Pbs31 domain-containing protein n=1 Tax=Pseud... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16142contigH-paniculata_contig16142:913..4393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.6
Seed ortholog evalue1.6e-55
Seed eggNOG ortholog2880.D7G7Q2
Hectar predicted targeting categorychloroplast
EggNOG OGs2BYH2@1,2S4K1@2759
Ec32 ortholog descriptionimm downregulated 23
Ec32 orthologEc-06_000790.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1533
Cds size585
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16142.3541.1prot_H-paniculata_contig16142.3541.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16142 1828..4360 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929290.0072696-UTR-H-paniculata_contig16142:912..18271622929290.0072696-UTR-H-paniculata_contig16142:912..1827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16142 913..1827 -
1691480802.8076844-UTR-H-paniculata_contig16142:912..18271691480802.8076844-UTR-H-paniculata_contig16142:912..1827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16142 913..1827 -
1622929290.0789676-UTR-H-paniculata_contig16142:4360..43931622929290.0789676-UTR-H-paniculata_contig16142:4360..4393Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16142 4361..4393 -
1691480802.847398-UTR-H-paniculata_contig16142:4360..43931691480802.847398-UTR-H-paniculata_contig16142:4360..4393Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16142 4361..4393 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929290.023531-CDS-H-paniculata_contig16142:1827..18331622929290.023531-CDS-H-paniculata_contig16142:1827..1833Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 1828..1833 -
1691480802.8163924-CDS-H-paniculata_contig16142:1827..18331691480802.8163924-CDS-H-paniculata_contig16142:1827..1833Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 1828..1833 -
1622929290.0393817-CDS-H-paniculata_contig16142:2559..25841622929290.0393817-CDS-H-paniculata_contig16142:2559..2584Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 2560..2584 -
1691480802.8239844-CDS-H-paniculata_contig16142:2559..25841691480802.8239844-CDS-H-paniculata_contig16142:2559..2584Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 2560..2584 -
1622929290.055265-CDS-H-paniculata_contig16142:3333..37951622929290.055265-CDS-H-paniculata_contig16142:3333..3795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 3334..3795 -
1691480802.8314066-CDS-H-paniculata_contig16142:3333..37951691480802.8314066-CDS-H-paniculata_contig16142:3333..3795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 3334..3795 -
1622929290.067545-CDS-H-paniculata_contig16142:4268..43601622929290.067545-CDS-H-paniculata_contig16142:4268..4360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 4269..4360 -
1691480802.8393512-CDS-H-paniculata_contig16142:4268..43601691480802.8393512-CDS-H-paniculata_contig16142:4268..4360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16142 4269..4360 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16142.3541.1

>prot_H-paniculata_contig16142.3541.1 ID=prot_H-paniculata_contig16142.3541.1|Name=mRNA_H-paniculata_contig16142.3541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MKTVCVALALAGSASAFITPMANVRATAPARSMTMSSQDQPMTRAEVLNT
VFSAGAVAAVAAAAVPSAAFADGAKSRATQSRARGIYGGRVAALSDAVAK
GDSAAVLAEKNAFQLFVSGAYSTTKGKRAEATKLASAVISAAEAGDASAL
KSSYAAFMKYTEEKSGYKGAGDGQGLGSEFDYKNRTPLGTVYQR*
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mRNA from alignment at H-paniculata_contig16142:913..4393-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16142.3541.1 ID=mRNA_H-paniculata_contig16142.3541.1|Name=mRNA_H-paniculata_contig16142.3541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3481bp|location=Sequence derived from alignment at H-paniculata_contig16142:913..4393- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TAAGCTACTTCCACATACCAACCTTTCTTGACGATGAAGACTGTGTGCGT
AGCCCTTGCTCTTGCTGGAAGCGCTTCGGCGTTCATCACGCCCATGGCGA
ACGTCAGGGCGACCGCACCCGCGAGGTGATGATATGATGGCATCTACATA
CCAACACCTCTTGAACGAGGTTTTGGGTTCATGCGTCTGCTTTGCGAGAT
GAGAGAGAGAGAGAGTACGCATGTGTGGGGAGGATACAAGCCCAAGAGTG
TTGGCAAGCCATCTTGTTGTCAGGGGGTTCCTATCCCTTATCCTCTTCGA
GTTTAAAGTCTCCTGGCACATTGGCCTTGGTGCTCGCCTAATACCCAATA
TCTAGTGTGTAGAGGCTCTTCTGTCATACTTGGGATATTGGCTGATGTTG
ACGGTTTGCGGTACATGTGTTCAGTGAACGATGTGTGCATTGTCTAGTGG
AGTGAGTCACAGCCTCCCACCAAACTCTGAAGGGCTAGGCACGTGAGCAG
CTAGCTATCCATCCACCATCGTCGTCGTTTCAGGTTCATTCCCCATGCCT
ATTCACTCTGATTACACTCCCCATGTATTGTCGGTTTCTTGTCTGCAGGT
CCATGACCATGTCTTCCCAGGACCAACCCATGACCCGAGCAGAGGTGTTG
AACACAGTCTTCTCCGCTGGTGCCGTGGCGGCGGTCGCAGCTGCTGCCGT
CCCGTCTGCTGCGTTCGCGGATGGCGCCAAGTCCCGTGCCACGCAGTCCC
GCGCCCGTGGAATCTACGGAGGTCGTGTAGCTGCCCTGAGTGATGCTGTG
GCCAAGGGCGACTCTGCTGCTGTCCTCGCGGAGAAAAACGCGTTCCAGTT
GTTTGTATCTGGTGCGTACTCGACAACCAAGGGGAAGCGGGCTGAGGCAA
CGAAGCTCGCTAGTGCCGTGATCAGCGCCGCCGAAGCGGGTGACGCTTCA
GCCCTGAAGTCCTCGTACGCAGCGTTCATGAAGTACACGGAAGAGAAGAG
CGGGTACAAGGGAGCAGGGGATGGGCAGGGCTTGGGCTCCGAATTTGACT
ACAAGAACAGGTGCATCTTGCTCATGTGTTTCCTTTTTCCGTACGTTTCA
TGATTTTTGTGAAGATCTGTGGCACGGACGTTGTACTGAGTTGACCCCAC
TACACTGTACATCCAAGGAAGATTTTACATGATCATAATTCATGTTGCTT
CCCATCATAAGACCTACATTTTATATGTTGATCTTCTGCTACCCTGGTGA
AGATCAGCGCCACTTGTGGGAAGTGAGCTTGTATTGTAGCATGGTCTACA
CACCATATTTACACAACCTCCAGCATTTCGTGTGTTGTGTTCATTCGGAC
AGTGTTCTTGATTGGACATTTATGTTTTGAAACTTGAAGGGTTTGATGGG
ACGTGTGGAAAGATGGGTGTCGGGGATTCCCGCTACCATTTCAAGTCAGC
ATATGCTACTTGAGGGAGTATTCAGTAAATACCGTTTGAGTTTTTCAAGT
TCTTGAACTTGAGGTGTGTTCGGTGACCAACATTTATGTGCCAAACAAAA
TGAGTACCCCTCGTTGACATCACATAGCTTCTGCAAGCACTTCTAGCTTC
ATTTTGTTGTGAGCTGTTACTACACTAATGGGAAAGAAATGCTCTCAATG
CAGAGATCGATGTATTTAAGCGCCTCACCTCTTCTGAACGTACGGACCGT
TTCTGACCTGCTTTCGTTTCTCTGTACTCGCCTTGACTGTGAATCTTCTG
TGGCGCGTTGGCTGCTGTCCCATGGTGACTTGATGTCCTTCCATGGTTTG
GAAATGCAGGACGCCCCTTGGCACCGTGTACCAGGTATGATGTTAGTGTC
TGTACCATGTTTTGGCATTCTATTTGAGCAGGGTGATGTCGGGATATCTT
GAACATATCATACGGAGAAATGAAGCTACAAACTATTTGCTTTTCTCACA
GCCCCGTTCCGGAGGTGTATATCCGTCTTGGGTTTTTCACACACGCCAAC
AAACGATGTAAACAAATGAAGTAATGCCCTGCAATTGGATGGATGCTTTC
TACCTAAGTTATCTTTCACTAATTGTCGTGTCGACATCTACTTGGGTCGT
TGCCCTTGAACATGACAACTAATGTAAAGTTCGCGGTTTGAGTAGTAGGT
CATACTGTCGATCTGATCATCTTTTTTTTTGTGCGAAGAGCCAGTAGCAA
TTTTACCACCTTCCAGCATGTTTCCTCCCCATAGTCAACCCTAATACTCT
CCCCAGAAGCAAGTTTACGCTTTGCCCGAATTGGTGACAATGAGCGTGGG
ATGGAATTGATTATGGTTTCAATCTGAATCGAGGAGTAGGAAAGTGGCAA
CCCATGATACAATCAAAATGCAATAAATGCCGATTCTGTTGATCAAAAGT
TGATCCAAACAATGGCGAAGGGTTATCGCAACGGGTTAAGAGTATGGTGA
CATGTCGCCGAGTTCATGATGTGGATGGACAGCAAGTTGGAGAGTTTGAC
CGAGTCATCTTCACGACCCACCCTTTTGATCACCTTGTCCGCGGTTTGCT
TCTATCGCAGAGGTAAATAGAAGGAGTTTCTTCGCGTACGGAGGCCGCTG
GAGATTTCACGGGTCGCGTTCGGGTGGCCTGTGGTTTTCAGGTCTTGGCC
TGCTGAGCAAAGTCGATATTTTGACGGCAGCTGCGTTTAGGAAAAACACT
CCATCTACTTTCTCATCTAGATGTATGTTCCTAGACTCGTACATGAGATG
CGCATAATGCCAGCATGGCCAAACTAGTTTCCGTTTGCGTTTGCTTTAAG
GCCGTTTTCTTCGCAGCTCTCGATGTCGTCTTGACTGCAGCTCATGGCAC
AATTGAGATTAAAGATGCTTGGTCACGTTTTGAGTGAAGAGGGGGTTTAA
TTTTTGCTTCACTGCCATCATTTATTGTCGTGTAAGTTGATGTACTTGGA
AGTTTTCAAAGCTGCGCTTGAGGATTATTTTTGGTGCAGCAGGCCGTGTG
TGTGTTTGGCTCTAGTCATGCGGGGTCTCACACCTCATGGACTGGGGAAC
GAAATGGAGGTTACGGGGCGTGTCGTGTTCCCTCGCTTTTTGTACAGAGC
GACCTTATAGAAGGATCGGCGGAAGGTCATCACTGCTTTGACGCAGCAGT
AAACTGAGTTGTATGAAGGTGGAATAACTACCAGATTGCACTCGCAAAAA
AAAAATCGACTCTACAAGCGGCAAGGCAACGACTTCAACTTCGTGACCTC
CACCCGTAATAACGGGAGGCGGCGGCAACTGAGAAATACTTTCTGAAAAG
ATTTCGCTGTCACGGACTTGGGATCATGGATGGTATTCAACTGTATAGTC
TCCTTCATCTTATGATTTGAGTCACGTGGAACTGCACAAAAGGAAAGAAC
GGACATGATCCAGCTAGAGTTGAAGCATCTCATGCAGTAACGTGAGCTCT
TGATATAGTTTGAGTAGGACGCATGTTCTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig16142:913..4393-

>mRNA_H-paniculata_contig16142.3541.1 ID=mRNA_H-paniculata_contig16142.3541.1|Name=mRNA_H-paniculata_contig16142.3541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig16142:913..4393- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGACTGTGTGCGTAGCCCTTGCTCTTGCTGGAAGCGCTTCGGCGTT
CATCACGCCCATGGCGAACGTCAGGGCGACCGCACCCGCGAGATGAAGAC
TGTGTGCGTAGCCCTTGCTCTTGCTGGAAGCGCTTCGGCGTTCATCACGC
CCATGGCGAACGTCAGGGCGACCGCACCCGCGAGGTCCATGACCATGTCT
TCCCAGGACCAACCCATGACCCGAGCAGAGGTGTTGAACACAGTCTTCTC
CGCTGGTGCCGTGGCGGCGGTCGCAGCTGCTGCCGTCCCGTCTGCTGCGT
TCGCGGATGGCGCCAAGTCCCGTGCCACGCAGTCCCGCGCCCGTGGAATC
TACGGAGGTCGTGTAGCTGCCCTGAGTGATGCTGTGGCCAAGGGCGACTC
TGCTGCTGTCCTCGCGGAGAAAAACGCGTTCCAGTTGTTTGTATCTGGTG
CGTACTCGACAACCAAGGGGAAGCGGGCTGAGGCAACGAAGCTCGCTAGT
GCCGTGATCAGCGCCGCCGAAGCGGGTGACGCTTCAGCCCTGAAGTCCTC
GTACGCAGCGTTCATGAAGTACACGGAAGAGAAGAGCGGGTACAAGGGAG
CAGGGGATGGGCAGGGCTTGGGCTCCGAATTTGACTACAAGAACAGGTCC
ATGACCATGTCTTCCCAGGACCAACCCATGACCCGAGCAGAGGTGTTGAA
CACAGTCTTCTCCGCTGGTGCCGTGGCGGCGGTCGCAGCTGCTGCCGTCC
CGTCTGCTGCGTTCGCGGATGGCGCCAAGTCCCGTGCCACGCAGTCCCGC
GCCCGTGGAATCTACGGAGGTCGTGTAGCTGCCCTGAGTGATGCTGTGGC
CAAGGGCGACTCTGCTGCTGTCCTCGCGGAGAAAAACGCGTTCCAGTTGT
TTGTATCTGGTGCGTACTCGACAACCAAGGGGAAGCGGGCTGAGGCAACG
AAGCTCGCTAGTGCCGTGATCAGCGCCGCCGAAGCGGGTGACGCTTCAGC
CCTGAAGTCCTCGTACGCAGCGTTCATGAAGTACACGGAAGAGAAGAGCG
GGTACAAGGGAGCAGGGGATGGGCAGGGCTTGGGCTCCGAATTTGACTAC
AAGAACAGGACGCCCCTTGGCACCGTGTACCAGGACGCCCCTTGGCACCG
TGTACCAGAGGTAAAGGTAA
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