mRNA_H-paniculata_contig16130.3537.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A6H5JQ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ42_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.690e-56 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSSMVQIYSLAV 336
+ +ARASFEP LD+LR+RTVHVMKRLF VVEHMLK++GMQMSDTHQKPFSFIVKRVYE FVEK+ DE L RCRDDLT LTRFVTWDLHERSAGALRRSLPDSSMV IYSLAV
Sbjct: 333 VDKARASFEPTLDALRVRTVHVMKRLFGVVEHMLKSDGMQMSDTHQKPFSFIVKRVYEKFVEKAVDETLARCRDDLTALTRFVTWDLHERSAGALRRSLPDSSMVHIYSLAV 444
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: D8LDP8_ECTSI (ARC5, dynamin-related protein involved in plastid division n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP8_ECTSI) HSP 1 Score: 194 bits (493), Expect = 3.510e-55 Identity = 94/111 (84.68%), Postives = 101/111 (90.99%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSSMVQIYSLA 333
+ +AR SFEP LD+LR+RTVHVMKRLF VVEHMLK++GMQMSDTHQKPFSFIVKRVYE FVEK+ DE L RCRDDLT LTRFVTWDLHERSAGALRRSLPDSSMV IYSLA
Sbjct: 573 VDKARTSFEPTLDALRVRTVHVMKRLFGVVEHMLKSDGMQMSDTHQKPFSFIVKRVYEKFVEKAVDETLARCRDDLTALTRFVTWDLHERSAGALRRSLPDSSMVHIYSLA 683
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A835Z2U6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U6_9STRA) HSP 1 Score: 180 bits (456), Expect = 5.980e-52 Identity = 83/114 (72.81%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSSMVQIYSLAVSQ 342
+ +AR F+P+L+SLR+R VHV+KRLF VVEHMLK EG+ MS++HQKPFSFIV+R+YENF+E S D+CL RCRDDL LTRFVTWDL+ERS+GAL RSLPD+SMVQIYSLAV Q
Sbjct: 234 VEKARLGFDPLLESLRVRAVHVLKRLFAVVEHMLKREGLSMSESHQKPFSFIVRRIYENFIEASIDDCLVRCRDDLKALTRFVTWDLNERSSGALHRSLPDTSMVQIYSLAVEQ 347
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A835Z9B7_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B7_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.930e-46 Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLT--------------TLTRFVTWDLHERSAGALRRSLPDSSMVQIYSLAVSQ 342
+ +AR F+P+L+SLR+R VHV++RLF VVEHMLK EG+ MS++HQKPFSFIV+R+YENF+E S D+CL RCRDDL LTRFVTWDL ERS+GAL RSLPD+SMVQIYSLAV Q
Sbjct: 543 VEKARLGFDPLLESLRVRAVHVLRRLFAVVEHMLKREGLTMSESHQKPFSFIVRRIYENFIEASIDDCLVRCRDDLAXXXXXXXXXXXXXKALTRFVTWDLSERSSGALHRSLPDTSMVQIYSLAVEQ 670
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A835YPI8_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI8_9STRA) HSP 1 Score: 165 bits (417), Expect = 6.190e-45 Identity = 76/111 (68.47%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSSMVQIYSLA 333
+ +AR F+P+L+SLR+R VHV+KR+F VVEHMLK +G+ MS+ HQKPFSFIV+R+YENF+E S D+CL RCRDDL LTRFVTWDL ERS+GAL RSLPD++ VQI SLA
Sbjct: 558 VEKARLGFDPLLESLRVRAVHVLKRVFAVVEHMLKRDGLAMSEGHQKPFSFIVRRIYENFIEASVDDCLVRCRDDLKALTRFVTWDLGERSSGALHRSLPDTTTVQICSLA 668
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A4D9DCK2_9STRA (Dynamin-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCK2_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.380e-40 Identity = 66/110 (60.00%), Postives = 89/110 (80.91%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSSMVQIYSL 330
+ +AR+SFEP+L++LR RT H+MKRL+ + E ML+ G + +TH +PF IV+R+YENFV K+ D+CL RCRDDL LTRFVTWDLHERSAGAL+RSLP S ++Q+Y++
Sbjct: 605 VEKARSSFEPLLEALRHRTTHIMKRLYPITEFMLQRNGKGLEETHHRPFQEIVRRIYENFVYKTVDDCLVRCRDDLKALTRFVTWDLHERSAGALQRSLPQSHLIQVYTM 714
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A7S3UW64_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW64_HETAK) HSP 1 Score: 134 bits (336), Expect = 5.310e-34 Identity = 56/116 (48.28%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSSMVQIYSLAVSQDR 348
+ +A+ FEP+L +LR R H+M+RLF + HM+ AEG+ ++D +Q+PF+ ++++VY FV+++ D + +CR DL +TRFVTWDLHER GAL+RSLPD+ MV+IYS+ + + R
Sbjct: 532 VEKAKQGFEPLLQALRHRATHIMRRLFPLARHMMMAEGLTLADPYQRPFNAVLEKVYTQFVDETIDNAIDQCRYDLKAITRFVTWDLHERGTGALQRSLPDNQMVEIYSMVMGRGR 647
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: B7G2X3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2X3_PHATC) HSP 1 Score: 108 bits (271), Expect = 3.090e-25 Identity = 56/112 (50.00%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMS--DTHQKP-FSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSS-MVQIY 324
+ +AR SFEP+L +L++R HVM+RL V E+M++ EG + D Q P F +++ +YE FV+K AD ++RCRDDLT++TR+VTW+L ERS+GAL R+LPD + MV +Y
Sbjct: 526 LEKARISFEPLLWALQMRMAHVMERLCPVTEYMIR-EGRDQNAMDISQNPQFRQLIRTIYEKFVQKCADSAMSRCRDDLTSITRYVTWNLDERSSGALTRALPDQTDMVSVY 636
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A7S0CK04_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK04_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.060e-24 Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLK---------AEGMQMS-------------------DTHQKP-FSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDS-SMVQIYSLAV 336
+ +AR +F+P+L++LRLR HVM +L V E+ML+ A G + S D Q P F +V+ +++NF++K++D ++RCRDDL +LT+FVTWDLHERS GALRRSLPD +V +Y +AV
Sbjct: 406 LEKARVTFDPLLEALRLRCTHVMSKLCSVSEYMLQHKRERNYYAAGGNEASNFSGSASTARTNAINRKSLDLTQSPQFRQLVRTIFDNFLQKTSDSAMSRCRDDLVSLTKFVTWDLHERSGGALRRSLPDQMDLVAVYRVAV 547
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Match: A0A7S2UD37_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD37_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.090e-24 Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 1 IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAE-----------------------GMQMSDTHQKP-FSFIVKRVYENFVEKSADECLTRCRDDLTTLTRFVTWDLHERSAGALRRSLPDSS-MVQIYSLAV 336
+ +A+ SF+P+L++L+ R HVM RL V +HM+ G +D Q P F +++ ++E FV+K +D ++RCRDDLT LTRFVTWDLHER GALRRSLPD + +V +Y +AV
Sbjct: 672 LEKAQISFDPLLEALKSRVTHVMSRLCPVGQHMINQRKERKLSSFGYSFEDRVNSHDNSGGDSATDVTQNPQFQQLIQAIFEEFVQKCSDSAMSRCRDDLTALTRFVTWDLHERGGGALRRSLPDQTDIVSVYQVAV 808 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16130.3537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16130.3537.1 >prot_H-paniculata_contig16130.3537.1 ID=prot_H-paniculata_contig16130.3537.1|Name=mRNA_H-paniculata_contig16130.3537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp IGQARASFEPVLDSLRLRTVHVMKRLFFVVEHMLKAEGMQMSDTHQKPFSback to top mRNA from alignment at H-paniculata_contig16130:5219..5812- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16130.3537.1 ID=mRNA_H-paniculata_contig16130.3537.1|Name=mRNA_H-paniculata_contig16130.3537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=594bp|location=Sequence derived from alignment at H-paniculata_contig16130:5219..5812- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16130:5219..5812- >mRNA_H-paniculata_contig16130.3537.1 ID=mRNA_H-paniculata_contig16130.3537.1|Name=mRNA_H-paniculata_contig16130.3537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at H-paniculata_contig16130:5219..5812- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |