prot_H-paniculata_contig16094.3526.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16094.3526.1
Unique Nameprot_H-paniculata_contig16094.3526.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
BLAST of mRNA_H-paniculata_contig16094.3526.1 vs. uniprot
Match: D7G5Y8_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G5Y8_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.810e-31
Identity = 72/164 (43.90%), Postives = 96/164 (58.54%), Query Frame = 0
Query:    9 GLSLGMMSIRVLSYSMLGYGLFYLAMCLGKWYSSNVFNSREDNFEYTID-RDVEI---GDLY-----NQIVVFAMLPVVLSAALGGVYECLWKKRDDER------SGNDGTQHSTLRSWLDSWHNVVHYKFKALAQYSPWLSVGEVTVLSLWLFGMAAQLWQSV 157
            G+   + +IRV SY MLGY LFYLAM +GKWY   +     D  E  +D  D ++    DLY         +F  LP++L+AALGGVYE LWK+R+         S   G +  +    L  +H+VVHY+++ L QYSPWL+VGE TVL+LWL  M +Q WQ V
Sbjct:    6 GIRCALTAIRVASYGMLGYCLFYLAMFIGKWYEGTILPG--DELELVLDSEDADLDGSADLYIKHSDTSKFIFIGLPIILTAALGGVYEALWKRREIRSTQEHPDSAAAGEEEDSKPGILAFFHSVVHYQYRPLGQYSPWLTVGETTVLTLWLLAMGSQCWQGV 167          
BLAST of mRNA_H-paniculata_contig16094.3526.1 vs. uniprot
Match: D7FK19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK19_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.780e-21
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   18 RVLSYSMLGYGLFYLAMCLGKWYSSNVFNSREDNFEYT--------IDRDVEIGDLYNQIVVFAMLPVVLSAALGGVYECLWKKRDDERSGNDGTQHSTLRSWLDSWHNVVHYKFKAL-AQYSPWLSVGEVTVLSLWLFGMAAQLWQSV 157
            R  SY +LGY LF+LAM  GKWY  + F   +D  ++          D +++I     Q+ +F   P++L+AALGGVYE LW  R  E    D  + S    +L + H+++H +F+ L + Y PWL+VGE   + LW+  M ++L Q V
Sbjct:   14 RTFSYLLLGYALFHLAMHFGKWYGEH-FEDTDDGLQHLEFVMQGEGTDDELKIRTSRGQLFLFLASPIILAAALGGVYEALWLSR--EAKAGDAAEASKAGGFLATIHSIMHCQFRPLGSSYFPWLTVGEAAAMFLWICVMVSELTQGV 159          
BLAST of mRNA_H-paniculata_contig16094.3526.1 vs. uniprot
Match: A0A6H5KG64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG64_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 7.290e-16
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 0
Query:   18 RVLSYSMLGYGLFYLAMCLGKWYSSNVFNSREDNFEYT--------IDRDVEIGDLYNQIVVFAMLPVVLSAALGGVYECLWKKRDDERSGNDGTQHSTLRSWLDSWHNVVHYKFKAL-AQYSP 132
            R  SY +LGY LF+LAM  GKWY  N F   +D  ++          D +++I     Q+ +F   P++L+AALGGVYE LW  R  E    D  + S    +L + H+++H +F+ L + Y P
Sbjct:   14 RTFSYLLLGYALFHLAMHFGKWYGEN-FEDTDDGLQHLEFVMQGEGTDDELKIRTSRGQLFLFLASPIILAAALGGVYEALWLSR--EAKAGDAAEASKAGGFLATVHSIMHCQFRPLGSSYFP 134          
BLAST of mRNA_H-paniculata_contig16094.3526.1 vs. uniprot
Match: D8LNK5_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK5_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 4.490e-15
Identity = 40/121 (33.06%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   14 MMSIRVLSYSMLGYGLFYLAMCLGKWYSSNVFNSREDNFEYTIDRDVEIGDLYNQIVVFAMLPVVLSAALGGVYECLWKKRDDE--RSGNDGTQHSTLRSWLDSWHNVVHYKFKALAQYSP 132
            ++S+R L+ ++L Y +FYLAM  G WY  + F +  D  +Y I     +    NQ  +F +L  V++AALGG+Y+ +WK R+ +  + G   +  S ++S+L ++++++H++F+ L + SP
Sbjct:   25 LVSLRFLASAVLLYSVFYLAMARGTWYREHFFVN--DELDYDISSGANMSTSQNQRALFLLLLPVVAAALGGIYQAVWKYREGKATQDGLPASSSSKVQSFLKAYNSIIHFQFRPLGKLSP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16094.3526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5Y8_ECTSI1.810e-3143.90Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FK19_ECTSI2.780e-2136.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG64_9PHAE7.290e-1636.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNK5_ECTSI4.490e-1533.06Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..132
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
NoneNo IPR availableTMHMMTMhelixcoord: 19..41
NoneNo IPR availableTMHMMTMhelixcoord: 69..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16094contigH-paniculata_contig16094:3704..4512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16094.3526.1mRNA_H-paniculata_contig16094.3526.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16094 3593..4512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16094.3526.1 ID=prot_H-paniculata_contig16094.3526.1|Name=mRNA_H-paniculata_contig16094.3526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
MEQSTYVRGLSLGMMSIRVLSYSMLGYGLFYLAMCLGKWYSSNVFNSRED
NFEYTIDRDVEIGDLYNQIVVFAMLPVVLSAALGGVYECLWKKRDDERSG
NDGTQHSTLRSWLDSWHNVVHYKFKALAQYSPWLSVGEVTVLSLWLFGMA
AQLWQSVH
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