prot_H-paniculata_contig16078.3521.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16078.3521.1
Unique Nameprot_H-paniculata_contig16078.3521.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length100
Homology
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: W4FZ63_9STRA (Chromo domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ63_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.650e-11
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    6 SAHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDLQVVFAAAQHQGE-FQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDV 99
            S+ +Y V++++TG + EAHV R++ YAD SL V +D +   A   H  E +++  I+D      KK +Y VL++W GL   E SWEP A I EDV
Sbjct:   80 SSWLYDVKNLITGDEREAHVSRLKFYADKSLHVSEDFKEHVA---HNSEGYEVEAIVDARYVAAKK-DYEVLLKWRGLNDVENSWEPAATIKEDV 170          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.170e-9
Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:    1 IVTAGSAHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDLQVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDVP 100
            +  A S  ++ +E+++TG + E H  R++ YAD+SL V +DL        H  E  + D L       ++  + + V W GL   E SWEP AV+ +DVP
Sbjct:  352 VTAATSNWIFEIENLITGERREVHASRLKFYADSSLEVTEDL---LRHVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAEDSWEPAAVLLQDVP 448          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: A0A0G4IUJ7_PLABS (Chromo domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUJ7_PLABS)

HSP 1 Score: 57.4 bits (137), Expect = 8.100e-8
Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 0
Query:    9 VYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDLQVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDVP 100
            VY +ED++T  + +AH  R+R YADA L +  +++        Q  F + D+LD   + + + E  + V W G    E +WEP A+I EDVP
Sbjct:   72 VYELEDLLTARRFQAHTQRIRRYADADLNITTEIKQHLERLDQQ--FHVDDLLDCRIDRETQ-ELQIKVAWSGFDPSEATWEPAALIAEDVP 160          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: W2KEB9_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KEB9_PHYPR)

HSP 1 Score: 54.3 bits (129), Expect = 2.420e-6
Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    7 AHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDL------QVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDV 99
            AH + +E ++TGAK + HV R++ YADASL V ++L      QV+  + +     +  D+++         +Y VLV+W GL   E S+EP+  +  DV
Sbjct:  625 AHSFLIEHLITGAKLDVHVSRLKFYADASLNVTEELLEHISAQVILLSVEKLKSHRWNDMIN---------DYEVLVQWKGLEQIEDSYEPLTSLARDV 714          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: V9EDH7_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9EDH7_PHYPR)

HSP 1 Score: 54.3 bits (129), Expect = 2.440e-6
Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    7 AHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDL------QVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDV 99
            AH + +E ++TGAK + HV R++ YADASL V ++L      QV+  + +     +  D+++         +Y VLV+W GL   E S+EP+  +  DV
Sbjct:  853 AHSFLIEHLITGAKLDVHVSRLKFYADASLNVTEELLEHISAQVILLSVEKLKSHRWNDMIN---------DYEVLVQWKGLEQIEDSYEPLTSLARDV 942          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: A0A6A3DMZ5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DMZ5_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.140e-5
Identity = 32/99 (32.32%), Postives = 51/99 (51.52%), Query Frame = 0
Query:    2 VTAGSAHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDLQVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDVP 100
            V + +A+ + +E ++TGA    H  R++ YAD+SL V ++  ++   A       +        +P     Y VL  W GL   E SWEP+ ++HEDVP
Sbjct:   35 VISANANSFEIEHLLTGAIRTVHASRLKRYADSSLDVNEE--ILEHVANQDVYLTVEAFKHHRTHPTHF--YEVLTGWEGLEDIEDSWEPIKIMHEDVP 129          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: A0A6A4B0A2_9STRA (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B0A2_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.020e-5
Identity = 32/99 (32.32%), Postives = 51/99 (51.52%), Query Frame = 0
Query:    2 VTAGSAHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDLQVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDVP 100
            V + +A+ + +E ++TGA    H  R++ YAD+SL V ++  ++   A       +        +P     Y VL  W GL   E SWEP+ ++HEDVP
Sbjct:  274 VISANANSFEIERLLTGAIRTVHASRLKRYADSSLDVNEE--ILEHVANQDVYLTVEAFKQHRTHPTHF--YEVLTGWEGLEDIEDSWEPIKIMHEDVP 368          
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Match: A0A6G0X0V9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0V9_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.060e-5
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    1 IVTAGSAHVYTVEDIVTGAKEEAH-VVRMRPYADASLVVGKDLQVVFAAAQHQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDVP 100
            IV   S  V+ V+D+V   +   H   RM+ Y D+SL V ++  ++  A   QG   +     + +    +G + V V+W+GL   E SWEP+ +IHEDVP
Sbjct: 1144 IVNVISDWVFEVQDLVEPFEISTHHASRMQFYCDSSLNVTEE--ILDHARYTQGGHMVRGSAGLRKG---RGGFEVCVQWLGLEDTEASWEPLDIIHEDVP 1239          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16078.3521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
W4FZ63_9STRA9.650e-1142.11Chromo domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A2P4XSG7_9STRA6.170e-934.00Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A0G4IUJ7_PLABS8.100e-835.87Chromo domain-containing protein n=1 Tax=Plasmodio... [more]
W2KEB9_PHYPR2.420e-634.34Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
V9EDH7_PHYPR2.440e-634.34Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A6A3DMZ5_9STRA1.140e-532.32Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A6A4B0A2_9STRA2.020e-532.32Integrase catalytic domain-containing protein (Fra... [more]
A0A6G0X0V9_9STRA4.060e-534.65Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 43..99
e-value: 1.1E-6
score: 30.3
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 55..100
score: 10.639
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 48..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16078contigH-paniculata_contig16078:5662..5961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16078.3521.1mRNA_H-paniculata_contig16078.3521.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16078 5662..5961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16078.3521.1 ID=prot_H-paniculata_contig16078.3521.1|Name=mRNA_H-paniculata_contig16078.3521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
IVTAGSAHVYTVEDIVTGAKEEAHVVRMRPYADASLVVGKDLQVVFAAAQ
HQGEFQIADILDIGENPDKKGEYVVLVEWVGLGGEERSWEPMAVIHEDVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf