prot_H-paniculata_contig16019.3499.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16019.3499.1
Unique Nameprot_H-paniculata_contig16019.3499.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length287
Homology
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: D8LEE8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE8_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.320e-129
Identity = 197/234 (84.19%), Postives = 208/234 (88.89%), Query Frame = 0
Query:   44 ATGAGTKVRVEGMAVTPLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            ATGAG+KV +EGM VTPLKDFAS+ MPAEVM YVT RGW +PT IQ+HCWPVLNAGRDV+GIAETGSGKTL FSLPAMS+IFK  K G K+ GP MLVLAPTRELALQSAEVIAEAG HC I SVCVYGGVPKR+Q+IALGGGRGGG CVQVVVATPGRLKDLVGEG CDLS V SLVLDEADRMLDLGFEQDVRDIIG CA   KRQTAMFSATWPKSIRDLAAEFL +PVKV
Sbjct:  142 ATGAGSKVHIEGMKVTPLKDFASSGMPAEVMKYVTLRGWDKPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMSKIFKNMKAGKKSEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGG-CVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIIGYCAGPSKRQTAMFSATWPKSIRDLAAEFLADPVKV 374          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: A0A835YU16_9STRA (DEAD box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU16_9STRA)

HSP 1 Score: 263 bits (673), Expect = 4.140e-80
Identity = 144/229 (62.88%), Postives = 165/229 (72.05%), Query Frame = 0
Query:   51 VRVEGMAVTPLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIF--KARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            + VEGM VTPL DF  A  PA+++ YV  + + +PT IQS+CWPVL AGRD+VGIAETGSGKTLAF LP ++R+   K    G     P MLVLAPTRELA+QSAEVIA AG    ++  CVYGGVPK EQ+ AL   R        VVATPGRLKDL+ EG  DLS V  +VLDEADRMLDLGFEQDVRDIIG  A +  RQTAMFSATWP+ IR LAAEFL  PV+V
Sbjct:  190 ITVEGMDVTPLADFDGAGFPAKLLAYVLAQKFERPTPIQSYCWPVLGAGRDIVGIAETGSGKTLAFGLPGLTRVLAQKGGSGGXXGARPEMLVLAPTRELAIQSAEVIAAAGAAAGVACACVYGGVPKGEQKRALRSAR-------AVVATPGRLKDLMSEGAVDLSGVVYMVLDEADRMLDLGFEQDVRDIIGATARA--RQTAMFSATWPREIRALAAEFLREPVRV 409          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: H3G5S8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S8_PHYRM)

HSP 1 Score: 238 bits (606), Expect = 1.540e-72
Identity = 128/218 (58.72%), Postives = 156/218 (71.56%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            P+  F      A+ M   + +G+ +PT IQS CWP+L +GRD++GIAETGSGKTLAFS+P M  I    +V  K  GP MLV+APTRELA+QS+ VI+EAGK C + S+C+YGGVPK  Q+ AL  G      V VVVATPGRLKDLV E  C+LS V  +VLDEADRMLD GFE+D+R IIG  +   +RQ AMFSATWP+SI+ LA EFL NPVKV
Sbjct:    3 PVLSFDDVTFEAKFMK--STKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGMIHIAAQPEVSLKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG------VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRSIIG--STHPERQIAMFSATWPQSIQKLAHEFLNNPVKV 210          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: A0A5D6YE84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE84_9STRA)

HSP 1 Score: 240 bits (613), Expect = 6.070e-72
Identity = 127/218 (58.26%), Postives = 157/218 (72.02%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            P++ FA     A+ +   T  G+++PT IQS CWP+L +GRD++GIAETGSGKTLAFS+P +  I     +  K +GP MLV+APTRELA+QS+EVI +AGK C + S C+YGGVPK EQ+  L  G      V VVVATPGRLKDL+ E  CDLS V  +VLDEADRMLD GFE+D+R IIG  A   +RQ AMFSATWP+SI+ LA EFL +PVKV
Sbjct:  156 PIRSFADVTFDAKFLK--TTAGFSKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPALSPKFSGPRMLVVAPTRELAMQSSEVITQAGKQCGLRSTCIYGGVPKHEQKKILRNG------VHVVVATPGRLKDLLEERACDLSKVTFVVLDEADRMLDEGFEKDIRRIIG--ATHPERQIAMFSATWPQSIQKLAHEFLVDPVKV 363          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: A0A7S3XUU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU1_HETAK)

HSP 1 Score: 239 bits (611), Expect = 1.250e-71
Identity = 134/237 (56.54%), Postives = 163/237 (68.78%), Query Frame = 0
Query:   50 KVRVEGMA-VTPLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFK----ARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCC----AASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            K+  EG A   P + F  A  P EV+      G+T PT IQ+ CWP+L+AGRD++G+AETGSGKTLAFSLPA++RI +     + +  +  GP MLV+ PTRELA Q A VI  AG    + SVCVYGGVPK EQ+  L   +GG     VVVATPGRL+DL+ E   DL  V  LVLDEADRMLDLGFEQD+R IIG C    AA+G R+TAMFSATWP+ +R+LAAEFL  PV+V
Sbjct:  133 KLTDEGAAPFPPHQTFGEAGFPPEVLGGC--EGFTAPTPIQAQCWPILSAGRDLIGVAETGSGKTLAFSLPALARIHRELGGGKALSRQRPGPLMLVICPTRELAQQCAAVIETAGAGAGLRSVCVYGGVPKHEQKRKLQNAQGG---AHVVVATPGRLRDLMSENAVDLGRVAHLVLDEADRMLDLGFEQDMRAIIGACPAPGAAAGGRRTAMFSATWPREVRELAAEFLDRPVRV 364          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: A0A8K1FHU1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU1_PYTOL)

HSP 1 Score: 238 bits (607), Expect = 3.500e-71
Identity = 128/218 (58.72%), Postives = 155/218 (71.10%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            P++ FA  K   ++M      G+  PT IQS CWP+L +GRD++GIAETGSGKTLAFS+PA+  I     +  K  GP MLV+APTRELA+QSA+VIA AGK   + S C+YGG PK EQ+  L  G      V VVVATPGRLKDLV EG C+LS V  +VLDEADRMLD GFE+D+R IIG  +   +RQ AMFSATWP+SI+ LA EFLT+PVKV
Sbjct:  142 PVRTFAEIKFADKLMKVC--EGFAAPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPALVHIAAQPAISPKMPGPRMLVVAPTRELAMQSADVIANAGKLVGVKSTCIYGGTPKHEQKRILRAG------VHVVVATPGRLKDLVEEGACNLSRVTFVVLDEADRMLDEGFEKDIRMIIG--STHPERQIAMFSATWPQSIQKLAHEFLTDPVKV 349          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: M4BN34_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN34_HYAAE)

HSP 1 Score: 238 bits (606), Expect = 4.820e-71
Identity = 128/218 (58.72%), Postives = 157/218 (72.02%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            P+  F      ++ M   T +G+ +PT IQS CWP+L +GRD++GIAETGSGKTLAF+LP +  I     V SK  GP MLV+APTRELA+QS+ VI+EAG+ C + SVC+YGGVPK  Q+ AL  G      V VVVATPGRLKDLV E  C+LS V  +VLDEADRMLD GFE+D+R IIG  +   +RQ AMFSATWP+SI+ LA EFLT+PVKV
Sbjct:  140 PVLSFQDVTFDSKFMN--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFALPGLIHIAAQPAVSSKFPGPRMLVVAPTRELAMQSSAVISEAGRKCGLKSVCIYGGVPKHTQKKALRDG------VHVVVATPGRLKDLVEERCCNLSKVTFVVLDEADRMLDEGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLTDPVKV 347          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: A0A6G0WXV8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXV8_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.020e-70
Identity = 128/218 (58.72%), Postives = 154/218 (70.64%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            PL  F     P  +MT  T  G+  PT IQ+ CWP+L +GRD++GIA+TGSGKTLAF++P +  I    K   K  GP MLV+APTRELA+Q AEVI+ AGK  +I+S+C+YGGVPK EQ+ AL  G      V VVVATPGRLKDL+ E  C LS V   VLDEADRMLD GFE+D+R IIG C A  +RQ AMFSATWP+SI+ LA EFL +PVKV
Sbjct:  132 PLLTFREVNFPKHMMTSTT--GFAAPTPIQALCWPILTSGRDIIGIAQTGSGKTLAFAIPGLVHIADQMKKSKKLQGPVMLVVAPTRELAIQCAEVISIAGKAANITSICIYGGVPKHEQKKALKQG------VHVVVATPGRLKDLMEEKACSLSGVTYCVLDEADRMLDDGFEKDIRRIIGGCHA--ERQIAMFSATWPQSIQTLAHEFLVDPVKV 339          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: G4ZE15_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZE15_PHYSP)

HSP 1 Score: 235 bits (599), Expect = 6.120e-70
Identity = 127/218 (58.26%), Postives = 156/218 (71.56%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            P+  F      A+ M   T +G+ +PT IQS CWP+L +GRD++GIAETGSGKTLAFS+P +  I     V  K  GP MLV+APTRELA+QS+ VI+EAGK C + S+C+YGGVPK+ Q+ AL  G      V VVVATPGRLKDLV E  C+LS V  +VLDEADRMLD GFE+D+R IIG  +   +RQ AMFSATWP+SI+ LA EFL +PVKV
Sbjct:  148 PVLSFDDVTFEAKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPAVSPKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKQAQKKALRDG------VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDDGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLNDPVKV 355          
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Match: A0A662Y627_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y627_9STRA)

HSP 1 Score: 235 bits (599), Expect = 7.290e-70
Identity = 128/218 (58.72%), Postives = 155/218 (71.10%), Query Frame = 0
Query:   60 PLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGRDVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELALQSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATPGRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKRQTAMFSATWPKSIRDLAAEFLTNPVKV 277
            P+  FA     A+ M   T +G+T PT IQS CWP+L +GRD++GIAETGSGKTLAF++P +  I     V  K  GP MLV+APTRELA+QS+ VI+EAGK C + SVC+YGGVPK  Q+ AL  G      V VVVATPGRLKDL+ E  C+LS V  +VLDEADRMLD GFE+D+R IIG      +RQ AMFSATWP+SI+ LA EFL +PVKV
Sbjct:  156 PVLSFADVTFDAKFMK--TTKGFTTPTPIQSQCWPILASGRDIIGIAETGSGKTLAFAIPGLIHIADQPAVSHKFPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSVCIYGGVPKYTQKKALQDG------VHVVVATPGRLKDLMEERSCNLSKVTFVVLDEADRMLDEGFEKDIRLIIG--GTHPERQIAMFSATWPQSIQKLAHEFLNDPVKV 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16019.3499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE8_ECTSI1.320e-12984.19DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YU16_9STRA4.140e-8062.88DEAD box RNA helicase n=1 Tax=Tribonema minus TaxI... [more]
H3G5S8_PHYRM1.540e-7258.72Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6YE84_9STRA6.070e-7258.26Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S3XUU1_HETAK1.250e-7156.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1FHU1_PYTOL3.500e-7158.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BN34_HYAAE4.820e-7158.72Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6G0WXV8_9STRA2.020e-7058.72Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
G4ZE15_PHYSP6.120e-7058.26Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A662Y627_9STRA7.290e-7058.72Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 81..281
e-value: 3.4E-44
score: 162.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 93..277
score: 25.901
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 86..265
e-value: 6.7E-45
score: 153.0
NoneNo IPR availableGENE3D3.40.50.300coord: 3..280
e-value: 1.1E-73
score: 249.6
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 34..280
NoneNo IPR availablePANTHERPTHR24031:SF572DEAD-BOX ATP-DEPENDENT RNA HELICASE 40coord: 34..280
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 221..229
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 62..90
score: 8.81
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 55..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16019contigH-paniculata_contig16019:747..5588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16019.3499.1mRNA_H-paniculata_contig16019.3499.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16019 747..5588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16019.3499.1 ID=prot_H-paniculata_contig16019.3499.1|Name=mRNA_H-paniculata_contig16019.3499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bp
KRKKKKKNKDSSAAVTAESTTVSSSSSAQMAAASAAAAAAGGAATGAGTK
VRVEGMAVTPLKDFASAKMPAEVMTYVTERGWTQPTQIQSHCWPVLNAGR
DVVGIAETGSGKTLAFSLPAMSRIFKARKVGSKATGPSMLVLAPTRELAL
QSAEVIAEAGKHCDISSVCVYGGVPKREQRIALGGGRGGGGCVQVVVATP
GRLKDLVGEGVCDLSHVNSLVLDEADRMLDLGFEQDVRDIIGCCAASGKR
QTAMFSATWPKSIRDLAAEFLTNPVKVCMCVCLCNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase