prot_H-paniculata_contig1600.3486.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1600.3486.1
Unique Nameprot_H-paniculata_contig1600.3486.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length432
Homology
BLAST of mRNA_H-paniculata_contig1600.3486.1 vs. uniprot
Match: D7FXX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX9_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 3.400e-57
Identity = 156/426 (36.62%), Postives = 220/426 (51.64%), Query Frame = 0
Query:    3 ELVSTCAKRDRASRTSYGRVWKGLLSSMEEVLRSGRGAQLPHLGTVTYVTRSQRESSSAGHRGYVFVPNPNFVRAYSIIQLIPPKFALLAPFVPVSSARVAHAAEVNHEYARAVIASIVDAIGRRACSGATLRLPFGEIGMLLMKGRTIRFEFAEGFRRPRMDSRADEYSAHVKRILGNLDARARASTS--PRDLESNLTPPTVRRAPSS------------------HAGRRAIHSKEKVPLTTPVGENQIHHAGDGVSLATKLTHSTTGDPSPTSRSLGARPTTVGGVTSRREDRSTVASI---SPALGHDAGLCSSRTNVVGEPSPCRRRGALPTAPAHGAFVASGTTARGFIEAAGVAVATGTAATVGSRGSERLKVEEKKSEHSISPRAAKKVLPHFLAIGNSGNQALLVKEGPEIVQRQA 405
            +L+S CAK++R+S++ Y RVW+ L+   EEVL SGRGA +  LGTVTY++R                    F RA+S+IQ  PP+ +LLAP V +SSARV H A V+H+Y R  + +IVD IGRR CSG+ L LPFG +G L+ K RT+ F FA+GFR P+  +   +Y   V+RIL  ++A+A+A     P    ++ T P    +PSS                  H+ R+A +S +     + +G   +H +    S+ +    ++ GD      S GA PT+V        D +    +   + +L    G  +S+ ++  EP     R   P      A VA G   R   E A         A V +R         + ++  ISP  AKKVLPHFLAIGN G+QAL+ KEG EIVQRQA
Sbjct:    2 DLISACAKQNRSSKSKYQRVWRALVLCAEEVLASGRGATIEKLGTVTYISR--------------------FARAFSVIQRAPPQRSLLAPAVSISSARVGHTAGVDHDYTRVALGAIVDWIGRRVCSGSNLSLPFGRLGTLVGKERTLSFVFADGFRPPKTMAVQGKYDRDVRRILAAIEAKAKADPHEPPGGEHASTTRPET--SPSSGCGGANNRSATENGSQEPHSWRKARNSSQSGSARSGIGSEPLHLSTRS-SVLSSYRRNSDGD------SRGAEPTSVDVA-----DPAAAGDVRRGTASLPRQRGTRNSQDSLSEEPEAPTPR---PMITGAAAVVAGGP--RTNRETAXXXXXXXXXARVENRA--------QGNKGDISPGTAKKVLPHFLAIGNPGSQALVAKEGAEIVQRQA 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1600.3486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXX9_ECTSI3.400e-5736.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040673CCDC81, HU domain 2PFAMPF18289HU-CCDC81_euk_2coord: 94..161
e-value: 9.0E-7
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1600contigH-paniculata_contig1600:18643..22579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1600.3486.1mRNA_H-paniculata_contig1600.3486.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1600 18643..22579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1600.3486.1 ID=prot_H-paniculata_contig1600.3486.1|Name=mRNA_H-paniculata_contig1600.3486.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=432bp
MHELVSTCAKRDRASRTSYGRVWKGLLSSMEEVLRSGRGAQLPHLGTVTY
VTRSQRESSSAGHRGYVFVPNPNFVRAYSIIQLIPPKFALLAPFVPVSSA
RVAHAAEVNHEYARAVIASIVDAIGRRACSGATLRLPFGEIGMLLMKGRT
IRFEFAEGFRRPRMDSRADEYSAHVKRILGNLDARARASTSPRDLESNLT
PPTVRRAPSSHAGRRAIHSKEKVPLTTPVGENQIHHAGDGVSLATKLTHS
TTGDPSPTSRSLGARPTTVGGVTSRREDRSTVASISPALGHDAGLCSSRT
NVVGEPSPCRRRGALPTAPAHGAFVASGTTARGFIEAAGVAVATGTAATV
GSRGSERLKVEEKKSEHSISPRAAKKVLPHFLAIGNSGNQALLVKEGPEI
VQRQAVARFDVKRVAHKDLDEKEDADMRRRQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040673CCDC81_HU_dom_2