prot_H-paniculata_contig160.3483.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig160.3483.1 vs. uniprot
Match: D7G8Q6_ECTSI (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q6_ECTSI) HSP 1 Score: 219 bits (557), Expect = 1.210e-68 Identity = 111/200 (55.50%), Postives = 141/200 (70.50%), Query Frame = 0
Query: 64 MKFGVNVAAPFAGMKRDEGSAYPYAKQYCVRRSDLGTRLLVVQEMAKESTAPAPATATPRAADAEGVASRKFCEGMLVHVLEGGSELEA-SLASKTALVSRLKAVVDGHVYRLGDFFIRVGSCRKGAVYKGLVLEVEYMPTCRVVDGLAMITAFLPNVDESGRFIAASDLRDPLVFGRDPMYSRKHTALQTTDLFNRVFS 262
MK GVN+AAPF GMK++EG YP+AKQ+C+RR+D GTR++VVQEMA+E + A P EG L HVLEG LEA A++ LV+R+KA ++GH YRLGDF +RVG C+KGAV++GL LEVEY P RV DGL+MI AF+P++D+ G F A SDL+D +FGR P +S KH ALQ TDLFN VF+
Sbjct: 1 MKHGVNLAAPFVGMKKEEGIEYPFAKQFCIRRNDRGTRVMVVQEMAEEPSY----AAVP--------------EGKLTHVLEGEDPLEAMGAAARAGLVTRIKASIEGHAYRLGDFVVRVGKCKKGAVFRGLALEVEYRPCNRVADGLSMIEAFIPSIDQDGTFTAVSDLQDLAMFGRGPQFSVKHNALQITDLFNEVFA 182
BLAST of mRNA_H-paniculata_contig160.3483.1 vs. uniprot
Match: A0A835Z8G4_9STRA (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G4_9STRA) HSP 1 Score: 117 bits (293), Expect = 8.870e-29 Identity = 76/181 (41.99%), Postives = 96/181 (53.04%), Query Frame = 0
Query: 64 MKFGVNVAAPFAGM-KRDEGSAYPYAKQYCVRRSDLGTRLLVVQEMAKESTAPAPATATPRAADAEGVASRKFCEGMLVHVLEGGSELEASLASKTALVSRLKAVVDGHVYRLGDFFIRVGSCRKGAVYKGLVLEVEYMPTCRVVDGLAMITAFLPNVDESGRFIAASDLRDPLVFGRDPM 243
M+FGVN A F G R + + YP+ + VRRSD R+ +VQEM K RAA E VL G LEA +A K +RLKAV++G + LGDF +RVG+CRKG+ Y+GL +EVEY P V DG AMI A LP +D +G F A PL +PM
Sbjct: 1 MRFGVNTAVAFIGEGARQQDATYPFDRINVVRRSDEPGRVCLVQEMGK------------RAATLE-------------QVLVGDDALEADMAKKVPYPTRLKAVIEGSAFSLGDFTVRVGTCRKGSTYRGLAMEVEYHPCSSVRDGEAMIEALLPTLDPAGTFRHALS---PLPCALEPM 153
BLAST of mRNA_H-paniculata_contig160.3483.1 vs. uniprot
Match: A0A261Y1Z5_9FUNG (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1Z5_9FUNG) HSP 1 Score: 52.0 bits (123), Expect = 5.880e-5 Identity = 37/125 (29.60%), Postives = 54/125 (43.20%), Query Frame = 0
Query: 143 VLEGG------SELEASLAS-KTALVSRLKAVVDGHVYRLGDFFIRVGSCRKGAVYKGLVLEVEYMPTCRVVDGLAMITAFLPNVDESGRFIAASDLRDPLVFG-RDPMYSRKHTALQTTDLFNR 259
++EGG EL+ L K R +V+G ++ +GDF +R+ + G YKGL+LE+EY P L I FL + S ++ D G D +S HT Q R
Sbjct: 1 MVEGGVLVAADRELDTILGKLKNCWAVRQTIIVEGAIFEVGDFTLRIANLLLGQAYKGLLLEIEYGPATAPNSALGPIQNFLQAITPSTAQLSYETTYDYRSVGLSDTDFSAAHTGYQYMSFLKR 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig160.3483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig160.3483.1 ID=prot_H-paniculata_contig160.3483.1|Name=mRNA_H-paniculata_contig160.3483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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