mRNA_H-paniculata_contig15994.3474.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15994.3474.1
Unique NamemRNA_H-paniculata_contig15994.3474.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPB1_FUCDI (Oxygen-evolving enhancer protein n=1 Tax=Fucus distichus TaxID=3012 RepID=E5RPB1_FUCDI)

HSP 1 Score: 512 bits (1319), Expect = 2.010e-175
Identity = 269/325 (82.77%), Postives = 289/325 (88.92%), Query Frame = 1
Query:    1 MKLAVVAVAMSALS--VEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            MKLAV AVA+SALS   + FAPSSAFNGA +A   +TR+STSAV+M+V+DDFKKAA GALAVFAGLSL   AP +EA+TRD LD+LSYTQVKGTGLANRCP+V GE+TISVGG S+IIDMCIEPK FQVLSRVARGG MV Q +D+KLMTRETYTLYGIEG+F +  GKLTF EKDGIDYAATTIQSNYERIPFLFTVKDLVAKAS GGNQVKPGFQMGG F  PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGDAELFKENNKVFDVT G IEFEVN+VD EA EIGGVFVSKQKGDTDMGSKVPKDILVKG FYARI+
Sbjct:    1 MKLAVTAVAISALSPAADAFAPSSAFNGARMASVKNTRSSTSAVEMNVSDDFKKAAAGALAVFAGLSLFTSAP-SEAVTRDTLDALSYTQVKGTGLANRCPEVRGEDTISVGGGSEIIDMCIEPKQFQVLSRVARGGKMVPQMIDTKLMTRETYTLYGIEGNFGNKDGKLTFEEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASEGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAELFKENNKVFDVTDGNIEFEVNKVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIE 324          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: D8LG03_ECTSI (Manganese stabilising protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG03_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 2.380e-174
Identity = 271/325 (83.38%), Postives = 289/325 (88.92%), Query Frame = 1
Query:    1 MKLAVVAVAMSALSV-EGFAPSSAFNGAGLAR-AAHTRASTSAVDMSVADD-FKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARI 966
            MKLAV+AVA+SALS  + F PSSAFNGA +A  AA TRASTSAV+MS A D FKKAATGALA+FAGLSL   APP+EAITRD LD+LSYTQVKGTGLANRCPDV+GE+TISV G +KI+DMCIEPK FQVLS+VARGGNMV   +D+KLMTRETYTLYGIEGDF +  GKLTF+EKDGIDYAATTIQSNYERIPFLFTVKDLVAKAS GGNQVKPGFQMGG F  PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGDAE+FKENNKVFDVT G IEFEVN VD EA EIGGVFVSKQKGDTDMGSKVPKDILVKG FYARI
Sbjct:    1 MKLAVIAVALSALSPSDAFVPSSAFNGARMAGPAATTRASTSAVEMSAASDSFKKAATGALAIFAGLSLFT-APPSEAITRDTLDALSYTQVKGTGLANRCPDVVGEDTISVSGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASAGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNTVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARI 324          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPA9_9STRA (Oxygen-evolving enhancer protein n=1 Tax=Botrydium granulatum TaxID=73013 RepID=E5RPA9_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 3.390e-140
Identity = 228/326 (69.94%), Postives = 258/326 (79.14%), Query Frame = 1
Query:    1 MKLAVVAVAMSALSVEGFAPSSAFNGAGLARAAHTRA-STSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVA-RGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            MK AV   A++ALS      +SAF    L    H +A S SAV MS   DFK+AA GALAVFAGLS +  A PAEAIT+D +DSLSY QVKGTGLANRCP+V+GE TI+V G +KI+D+CIEPK FQVL   + R G +  +YV++KLMTR+TYTLYGIEGD  S+ GKL F+EKDGIDYAATT+Q    ER+PFLFTVK+LVAKA+ GG+ V PGFQ GG F  PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGD ELF ENNK FDVT GQIEFEVNRVDAEA EIGGVFVSKQKGDTDMGSKVPKD+LVKG FY R++
Sbjct:    1 MKTAVACAAVAALS-----GASAFQAPFLGSRVHGKATSASAVTMSAQQDFKQAAAGALAVFAGLSFL--AAPAEAITKDQIDSLSYMQVKGTGLANRCPEVVGEGTINVAGKTKIVDLCIEPKVFQVLEESSSRKGEVKKEYVNTKLMTRQTYTLYGIEGDLTSEDGKLVFTEKDGIDYAATTVQLPGGERVPFLFTVKELVAKAAKGGSSVAPGFQFGGAFKTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKELFDENNKTFDVTDGQIEFEVNRVDAEAGEIGGVFVSKQKGDTDMGSKVPKDMLVKGIFYGRLE 319          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A836CCR6_9STRA (Oxygen-evolving enhancer protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR6_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 4.890e-137
Identity = 221/326 (67.79%), Postives = 254/326 (77.91%), Query Frame = 1
Query:    1 MKLAVVAVAMSALSVEGFAPSSAFNGAGL-ARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLS-RVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            MK AV   A++AL       +SAF    + +R A     +SA+ MS  DDFK AA GALAVFAGLS +  A PA+AITRD +DSLSY QVKGTGLANRCP+V+GE +I+V G  +++D+CIEPKTFQVL  +  R G    +YV++KLMTR+TYTLYGIEG    + GKLTF E+DGIDYAATT+Q    ER+PFLFTVK+LVAKASTGGN +KPGFQ GG F  PSYRTGLFLDPKGRGG TGYDMAVALP LQSG EGD E+FKENNK FDVT GQIEFEVNRVD +A EIGGVFVSKQKGDTDMGSK PKD+LVKG FY RI+
Sbjct:    1 MKAAVACAALAALG-----GASAFQAPFMGSRVAGKATQSSALSMSAQDDFKAAAAGALAVFAGLSFL--AAPAQAITRDQIDSLSYMQVKGTGLANRCPEVVGEGSITVNGKKQVVDLCIEPKTFQVLEEKEGRKGETKKEYVNTKLMTRQTYTLYGIEGSIAPEDGKLTFREQDGIDYAATTVQLPGGERVPFLFTVKELVAKASTGGNTIKPGFQFGGAFKTPSYRTGLFLDPKGRGGVTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTDGQIEFEVNRVDTDAGEIGGVFVSKQKGDTDMGSKTPKDMLVKGIFYGRIE 319          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPB0_VAUFR (Oxygen-evolving enhancer protein n=1 Tax=Vaucheria frigida TaxID=195983 RepID=E5RPB0_VAUFR)

HSP 1 Score: 405 bits (1041), Expect = 1.560e-133
Identity = 219/325 (67.38%), Postives = 252/325 (77.54%), Query Frame = 1
Query:    1 MKLAVVAVAMSALS-VEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVA-RGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARI 966
            MK+A+  VA+SA+S V  F  S  F G+ +   +    + S   M+  DDFK  A GALAVFAGLS    AP A+AIT+D +DSLSY QVKGTGLANRCP+VIG E+I+V G  K++D+CIEPK FQVL   A + G    +YV++KLMTR+TYTLYGIEG F  + GKLTF EKDGIDYAATT+Q    ER+PFLFTVK+LVAKA+T GN V PGFQ GG F+ PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGD E+FKENNK FDVT+GQIEFEVNRVDA A EIGGVFVS QKGDTDMGSK PKD+LVKG FY R+
Sbjct:    1 MKVAISCVALSAISSVSAFQTS--FVGSRVKSLSRDGVNMS---MTAQDDFKNVAVGALAVFAGLSFF-GAPAADAITKDQIDSLSYMQVKGTGLANRCPEVIGTESINVNGKMKLMDLCIEPKVFQVLEETATKKGETKKEYVNTKLMTRQTYTLYGIEGSFAPEEGKLTFREKDGIDYAATTVQLPGGERVPFLFTVKELVAKAATSGNSVAPGFQFGGGFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTKGQIEFEVNRVDASAGEIGGVFVSNQKGDTDMGSKTPKDVLVKGIFYGRL 319          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: B7SSL7_ELYCH (Photosystem II extrinsic protein O n=2 Tax=Eukaryota TaxID=2759 RepID=B7SSL7_ELYCH)

HSP 1 Score: 395 bits (1016), Expect = 8.270e-130
Identity = 214/325 (65.85%), Postives = 249/325 (76.62%), Query Frame = 1
Query:    1 MKLAVVAVAMSALSVEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVA-RGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            MK+    VA+SA SV+  A   AF  AGL   A    S+SA+ MSV DD K  A GAL + AG+S++    P EAIT+D ++SLSY QVKGTGLANRCP+V G  +I V G +KI+DMCIEPKTFQVL   + + G    +YV++KLMTR+TYTLYGI+G F  + GK+TF EKDGIDYAATTIQ    ER+PFLFTVK+LVA+A+T GN V PG Q GGPF+ PSYRTGLFLDPKGRGGSTGYDMAVALP  QSG EGDAELF ENNK FDVT+G IEFEVNRVD    EIGGVFVSKQKGDTDMGSKVPKD+L+KG FY R++
Sbjct:    1 MKVPSALVALSAFSVKTSAFRPAF--AGLKTNAK---SSSALTMSVQDDIKTLAVGALTILAGVSILNA--PVEAITKDQIESLSYLQVKGTGLANRCPEVFGTGSIDVNGKTKIVDMCIEPKTFQVLEETSSKRGEAKKEYVNTKLMTRQTYTLYGIDGSFAPENGKITFREKDGIDYAATTIQLPGGERVPFLFTVKELVAQATTPGNSVTPGLQFGGPFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGKQSGIEGDAELFGENNKTFDVTKGNIEFEVNRVDPSNGEIGGVFVSKQKGDTDMGSKVPKDLLIKGIFYGRLE 318          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A7S2UVF7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVF7_9STRA)

HSP 1 Score: 352 bits (904), Expect = 3.210e-113
Identity = 186/292 (63.70%), Postives = 226/292 (77.40%), Query Frame = 1
Query:  103 TRASTSAV-DMSVADDFKKAATGA-LAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            TR+S+S V  MS  ++  K AT A LA F GLS +    P+ AIT + L  LSY QVKGTGLANRCPDV+GE+TIS+ G  K++DMCIEPK FQV     + G   S+YV++KLMTR+TYTL GI+GD K   GK+ F+EKDGIDY+ATT+Q    ER+PFLFTVK+LVAKA+ GG+  K G  + G F  PSYRTGLFLDPKGRGG+TGYDMAVALP +Q+G +GD EL+KENNK FDVT G+IEF++ +V+ E  EIGGVFVS+QKGDTDMGSKVPKDIL+KG FYARI+
Sbjct:   27 TRSSSSTVMTMSAENNLPKIATAAALAAFTGLSAMA---PSNAITSEVLRQLSYEQVKGTGLANRCPDVVGEDTISISGKKKLVDMCIEPKIFQV-----KEG---SEYVNTKLMTRQTYTLDGIDGDIKMADGKIQFTEKDGIDYSATTVQLPGGERVPFLFTVKELVAKATEGGSDFKVGLGLSGDFRTPSYRTGLFLDPKGRGGTTGYDMAVALPGIQNGEDGDEELYKENNKTFDVTDGKIEFQIQKVNKEEGEIGGVFVSRQKGDTDMGSKVPKDILLKGIFYARIE 307          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPB2_9DINO (Oxygen-evolving enhancer protein n=1 Tax=Kryptoperidinium foliaceum TaxID=160619 RepID=E5RPB2_9DINO)

HSP 1 Score: 352 bits (902), Expect = 6.380e-113
Identity = 178/280 (63.57%), Postives = 217/280 (77.50%), Query Frame = 1
Query:  133 SVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            S+ DD   A   ALA  A LS++ Q  PA+A+T+  ++ L+Y QVKGTGLANRCP+V+GE+TIS     K++DMCIEPK + V   + + G    ++V+SK++TR+TYTL GIEG   S+GG + F EK+GIDYAATT+Q    ER+PFLFTVKDLVAK +  G   KPGFQMGG F+VPSYRTGLFLDPKGRGG+TGYDMAVALP LQSG EGD +LFKENNK FDVT G+IE EVN+V+A+ +EIGGVFV+ Q GDTDMGSKVPK IL KG FYAR+D
Sbjct:   32 SLKDDLANAGKVALAGAAALSIMAQ--PAQALTKSEINELTYLQVKGTGLANRCPEVVGEDTISPKNGQKLVDMCIEPKAWAVEEEIGKAGKTEKKFVNSKVVTRQTYTLDGIEGVLSSEGGNIVFKEKEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDFSVPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDDLFKENNKTFDVTTGRIEMEVNKVNADEQEIGGVFVATQLGDTDMGSKVPKKILTKGIFYARVD 307          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A7S0KYC8_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYC8_9STRA)

HSP 1 Score: 352 bits (902), Expect = 6.600e-113
Identity = 180/286 (62.94%), Postives = 219/286 (76.57%), Query Frame = 1
Query:  115 TSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            +SA+ MS+ DD   A   ALA    + +I Q  PA+A+T+  ++SLSY QVKGTGLANRC +V+GE++I+    S++ +MCIEPK + V   V +GG    ++V+SK+MTR+TYTL GIEG+    GG + FSEK+GIDYA TTIQ    ER+PFLFTVKDLVAK +  G   KPGFQMGG F  PSYRTGLFLDPKGRGG+TGYDMAVALP LQSG EGDAELFKENNK FD+TQG+IE EVN+V+AE  EIGGVFV+ Q GDTDMGSKVPK IL KG FYA+++
Sbjct:   27 SSAMQMSLKDDIANAGKAALAGAIAVGMIAQ--PAQALTKSEINSLSYLQVKGTGLANRCAEVVGEDSITPKAGSRLTEMCIEPKAWAVEEEVGKGGKTEKKFVNSKVMTRQTYTLEGIEGNLDVAGGNIVFSEKEGIDYAPTTIQLPGGERVPFLFTVKDLVAKGN--GGAFKPGFQMGGDFNTPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDAELFKENNKTFDITQGRIEMEVNKVNAEESEIGGVFVATQLGDTDMGSKVPKKILTKGIFYAKVE 308          
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A6U4A1N0_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U4A1N0_9STRA)

HSP 1 Score: 349 bits (895), Expect = 7.100e-112
Identity = 178/277 (64.26%), Postives = 215/277 (77.62%), Query Frame = 1
Query:  142 DDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQS-NYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
            DD  K A  ALA    +++ V A PA+AIT+  L+ LSY QVKGTGLANRCP+V+GE++I+    S ++DMCIEPK + V   + +GG    ++V+SK+MTR+TYTL GIEG   +DGGK+ F+E++GIDYA TT+Q    ER+PFLFTVKDL A  + G    KPGFQMGG F VPSYRTGLFLDPKGRGG+TGYDMAVALP LQSG EGD ELFKENNKVF+VTQG+IE EVN+V+A+  EIGGVFV+ Q GDTDMGSKVPK IL KG FYAR+D
Sbjct:   35 DDVAKVAGAALA--GAVAVGVAAAPAQAITKQELNQLSYLQVKGTGLANRCPEVVGEDSITPKSGSMLVDMCIEPKAWAVEEEIGKGGKTEKKFVNSKVMTRQTYTLDGIEGVLTTDGGKIVFTEQEGIDYAPTTVQMPGGERVPFLFTVKDLKATGNAGA--FKPGFQMGGDFNVPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDELFKENNKVFEVTQGRIEMEVNKVNADESEIGGVFVATQLGDTDMGSKVPKKILTKGIFYARVD 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E5RPB1_FUCDI2.010e-17582.77Oxygen-evolving enhancer protein n=1 Tax=Fucus dis... [more]
D8LG03_ECTSI2.380e-17483.38Manganese stabilising protein n=2 Tax=Ectocarpus T... [more]
E5RPA9_9STRA3.390e-14069.94Oxygen-evolving enhancer protein n=1 Tax=Botrydium... [more]
A0A836CCR6_9STRA4.890e-13767.79Oxygen-evolving enhancer protein n=2 Tax=Tribonema... [more]
E5RPB0_VAUFR1.560e-13367.38Oxygen-evolving enhancer protein n=1 Tax=Vaucheria... [more]
B7SSL7_ELYCH8.270e-13065.85Photosystem II extrinsic protein O n=2 Tax=Eukaryo... [more]
A0A7S2UVF7_9STRA3.210e-11363.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
E5RPB2_9DINO6.380e-11363.57Oxygen-evolving enhancer protein n=1 Tax=Kryptoper... [more]
A0A7S0KYC8_9STRA6.600e-11362.94Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A6U4A1N0_9STRA7.100e-11264.26Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15994contigH-paniculata_contig15994:892..5514 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score509.2
Seed ortholog evalue1.4e-141
Seed eggNOG ortholog2880.D8LG03
Preferred namePsbO
KEGG koko:K02716
KEGG Pathwayko00195,ko01100,map00195,map01100
Hectar predicted targeting categorychloroplast
EggNOG free text desc.oxygen evolving activity
EggNOG OGs28JI2@1,2QRXA@2759
Ec32 ortholog descriptionmanganese stabilising protein
Ec32 orthologEc-21_005100.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons5
Model size2104
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15994.3474.1prot_H-paniculata_contig15994.3474.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15994 892..4382 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929277.8055303-CDS-H-paniculata_contig15994:891..12811622929277.8055303-CDS-H-paniculata_contig15994:891..1281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 892..1281 +
1691480797.713941-CDS-H-paniculata_contig15994:891..12811691480797.713941-CDS-H-paniculata_contig15994:891..1281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 892..1281 +
1622929277.824071-CDS-H-paniculata_contig15994:2414..25431622929277.824071-CDS-H-paniculata_contig15994:2414..2543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 2415..2543 +
1691480797.7277064-CDS-H-paniculata_contig15994:2414..25431691480797.7277064-CDS-H-paniculata_contig15994:2414..2543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 2415..2543 +
1622929277.8400996-CDS-H-paniculata_contig15994:3469..37511622929277.8400996-CDS-H-paniculata_contig15994:3469..3751Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 3470..3751 +
1691480797.7372067-CDS-H-paniculata_contig15994:3469..37511691480797.7372067-CDS-H-paniculata_contig15994:3469..3751Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 3470..3751 +
1622929277.8547847-CDS-H-paniculata_contig15994:4048..41931622929277.8547847-CDS-H-paniculata_contig15994:4048..4193Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 4049..4193 +
1691480797.748396-CDS-H-paniculata_contig15994:4048..41931691480797.748396-CDS-H-paniculata_contig15994:4048..4193Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 4049..4193 +
1622929277.8686492-CDS-H-paniculata_contig15994:4356..43821622929277.8686492-CDS-H-paniculata_contig15994:4356..4382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 4357..4382 +
1691480797.7572885-CDS-H-paniculata_contig15994:4356..43821691480797.7572885-CDS-H-paniculata_contig15994:4356..4382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15994 4357..4382 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929277.8827791-UTR-H-paniculata_contig15994:4382..55141622929277.8827791-UTR-H-paniculata_contig15994:4382..5514Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15994 4383..5514 +
1691480797.7647367-UTR-H-paniculata_contig15994:4382..55141691480797.7647367-UTR-H-paniculata_contig15994:4382..5514Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15994 4383..5514 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15994.3474.1

>prot_H-paniculata_contig15994.3474.1 ID=prot_H-paniculata_contig15994.3474.1|Name=mRNA_H-paniculata_contig15994.3474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MKLAVVAVAMSALSVEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDF
KKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPD
VIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRE
TYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQSNYERIPFLFTVKDLV
AKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPA
LQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKG
DTDMGSKVPKDILVKGTFYARID*
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mRNA from alignment at H-paniculata_contig15994:892..5514+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15994.3474.1 ID=mRNA_H-paniculata_contig15994.3474.1|Name=mRNA_H-paniculata_contig15994.3474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4623bp|location=Sequence derived from alignment at H-paniculata_contig15994:892..5514+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCTTGCCGTAGTTGCCGTCGCCATGTCCGCCCTCAGCGTGGAGGG TTTCGCCCCGTCTTCTGCCTTCAACGGGGCAGGCCTCGCACGCGCTGCGC ACACCCGTGCGTCAACCTCCGCGGTCGACATGTCTGTCGCAGACGACTTC AAGAAGGCAGCAACGGGTGCCCTCGCTGTGTTCGCAGGTCTTTCGTTGAT CGTTCAGGCGCCGCCAGCAGAGGCTATCACCCGGGACGCGTTGGACTCCC TCTCGTACACGCAGGTGAAGGGCACGGGGCTGGCGAACCGATGCCCTGAC GTGATTGGAGAGGAGACGATCAGCGTGGGTGGCAGCTCTAAGATTATTGA CATGTGCATCGAGCCCAAGACCTTCCAAGTGTTGTCGCGGGTGAGTACGG TGCTGGTTTGGTGATGGTCACTGCGGTGGCGGTGGTGGTGGTGGTGGTGA TGATAGTTGGGAGCGGCAGTTCAACAAGGAAGCTGCGAGATGGGGAAGCT GGACACAAGGAGTGGCATGACCTTGGGTATTAGTTGTGTGTGCACTTGTC TTGCAACATCCGAAAACGTAGCACCGATTTTTTCTTGGGAGTATGCTGTG GATGTGAGTCGTCACATGTTGTCTTGTTTTGCTCATGAACCAGTAAGGTT TTCAGTGCTCCATCTACAGGACACTTTCTGGAAGCCATCTAGTGCTTTCC GAACGTAACATCGAGAACAAAACGTCTTGGAAAGTTGACGGCCCTGCCAC GATACAGGGGTGCTGTAAGTACGACCTGCCCTTCGTGGTTGTATTACACC ACCCTTCAACCGGGAATATGTCCGCACAGTTGGTTAGGTTGCTTGTATCT CTCTTCTTCATGCATGAAAATTAGGCGCTGTGCAAAAACCATTTCGTACA AATCTTTTGATCATCCTGTTCCTGCGTTGCAAAGATCTGTTTTCGCTCGC CTGGGACATGAACCCAGCTGTCCTTCCCCCTAAGCCGTCACGTCGTCTTT GTCAAAATCGTACGATTGACGTCTAATGTCCAATCAGTTGAGACTGTAGT GTAGTCAATCTTGTCCGGTCACACGTCTACTGCCTTTTACCCTGACTACG TCAATCTGTCAATCGGTGATGCGTACGTATTAGTCTTGCTGGCTCTCTGG GTCGGATCATGAGCTGCTGCCGCACAAAATGCCTCTAGTCTGCCCAACAA TGGTGTTATGTACCAACTGCAGGCCCACATGGATTTGTAGTCGAGGCACA ACGATTCATGTGGACAGCATCAACCCGAGTTCTTCGGTCATTCTTGACCA CTGTGTCAGTTCTGTCATGAAACCAAACTACAACTTGTCTAGTCTATAGA GCACAAATTTGTGCAGCCACCAGTTGCAGCTAAAGCGAATTTGCTGGATC AGTCAATTCTGTCTGCTGTAATTACGAGGTCCCTCCGTGTGAGGTACCCG ATCCGCCCTTCACACGGTCATATCTCGCAAGATCATATTGTATTGAAATC GTCCAACATCCTATGTGCATCAGGTGGCAAGGGGAGGTAACATGGTGTCG CAATATGTGGACTCGAAGCTCATGACGCGTGAGACGTACACCTTGTATGG TATCGAGGGAGACTTCAAGAGCGATGGAGGCAAGCTCACCTTCTCCGAGA AGGTGAGAAAGTCATCGATGGAAGAGCAGCGACTATAACTGCGATGGTCG CGCCGAGAAAGAGTAGCAAATATAACTGCAATGGTCGCGCCGAGTACTTG GCGTAACATGTCAAGGGCTGCAGTAAGGAGTACAACAACCGACTTCATCT GAAGAAGCATTCACGTTCAACATATTTTCCAAGTAGAGTGAGCAAAAAAA TAACGGAGGAATCTTGTGATTGGTCAACGGATCACAAGACCGTTCAAAGG GCGACCTGGGTGAGTAAAAATATCTTCCGGTCATTGGTATACATACCTAC GGACGGTAGTCTTAGCATATACCAGAGTCAGCCTCGCACAGCGCAAGCGT TGAACCCTTCTCTTCTTTCCAGGCTCATGGCCTGGGGCTCGGAGCACATT TTGTTCATAATTCAAACATGAAGCAAATGGTGCGTTCTCGGAGCACCGAA CGGAATACTACTGGGACAATTCGCACCCTCTGTATTGAGTGCCTCGCACA TTTCCTATTGGAAATATGTAGGGGCATTCATGATCGATTATTGATCAATA TTGCATTCGTTTTTTGCCGTGGCCCTCATGGTTTTAATACGTGTCTAGTA TCGGCTGCCGAACTGGTGCTTCCTACTCGTATCTGAAGTCACGTATTTTT CAGTGTTGACGCCAGTTGCCACTGGTGAAGGAGGAGGCACTGAACACACC GGATGGTCTGATGGTTCTCGCGAAGAAGCCTGGTTGACAGCTCCTACAAC ACTTGCTACCCAGTGTTACTATGACGTCGTGCGTTCAAGACTTTTCGAAA TGATTACCCCTCAATCTGCTCTCGAAAAAGTGCTGTGCGACCTCAATTTT GGATCCTTCGCTTACATTGAGCGACCAAGAATGGGTCTTTTTGAATGTAC TCACCTCCCTCATGTTGATCTGTTGCAGGACGGCATCGACTACGCGGCCA CCACCATCCAGTCCAACTACGAGCGTATCCCCTTCCTGTTCACGGTGAAG GATTTGGTGGCGAAGGCCTCGACGGGGGGAAACCAGGTCAAGCCCGGATT CCAAATGGGCGGACCCTTCACGGTGCCGTCATACCGCACGGGTCTTTTCC TTGACCCCAAGGGCCGCGGTGGATCCACCGGTTACGACATGGCGGTCGCG CTGCCCGCGCTTCAGTCTGGTACCGAGGGAGACGCAGAGTTGTTCAAGGA GAACAACAAGGTGTGTCGATTGTGTCCTCGGTTGATGAAGTGGCGTGGGT CGTGGCTAGTGGGTTATAGAGGGCTACGCGTGTTGTATACTGGCGCAGCT GTATACTCGACAGTAGCTATCGACGGTACATCTACCGGTTCGATTACGGA TACGATGCTTGAATTGTTGACGCTGAACAAAATCCTTTAAAGACAAATGC TTTATCTCTTGTGACGAGGGTACCTGTTCAGAGAGGCGGTAATGGAACAT CGGAATGTCGACTGATCCCCGTGAAATGTGTTATATCTGCATTTCGCCGT GGTACAGGTATTCGATGTAACGCAGGGACAGATTGAGTTCGAGGTCAACC GGGTCGACGCGGAAGCCAAGGAGATTGGCGGTGTATTTGTGTCGAAGCAG AAGGGTGACACTGACATGGGAAGCAAGGTGCCCAAGGACATCCTCGTAAA GGGTGAGTTATCGTTCAGTTTTATCAGACCATCCAAACACCTTTTCGATG TCCTGAGCAACGGAAAACTTGCCATACCCCCATTCAATGTCATTCATGCC CTTTTACTCCCGCCTTTGTCCCATGTGGCGTGCATGTGTGTGTAATCGAC ATCTGCGCCCATCAGGTACCTTCTACGCTCGCATCGATTAATTTAATTCA ACGTTTTGGAACTGCATTGGTTGGGCGCGGGCTGGCGGTGGGGGTCCACA TCAAAAGAATTTACTCATAGCAAGGCCCGGAAAAGCTGAGCTTCAGTTGG GGTGTGTGGTGAAGCGCTGCGGTGTACTTGTATCGAGGATGTGGTGTTTT ACGGGGTGCTGAGCAGCCCCTAATCGAAGCATGGGAGGTCACTAGGACGC CCGAGGCATGAACAAATAATGGAGAAATGACTGAAGAAGAGCTGAACTAC TGTCTACGGAAAAGCCCGTCTCTGTACGGTTTTTTGTAGTGGGCTTTCGT TGATACACCGTTGTGCTTGTCCTCAGAATTGACTTCACCTTGTTTTCGTT CCTGTGCTGAGGTCGTTGGAATGGAGCTGATTCTCAAGGTCAATTTTCCT CTTGCCCGCGAGCAGCCCTCTGCTGGCACACATTATGCTCCTCTCCATGT CTACCCTTGGCGCGTTATACCCATGATCTTTTGGTTGAGGTAACGGTACT GGTTTTGGAGTATGCACTCGCTTCGAGCAAAGGGATGACTCTAGAGCAAC TCACTGCTTGAGGATGTGCCTTTGTCCATGTGCTCCTGATCGTTCGCTAG GGTCTCGAGTTTGATGGTGTGGGTAGCACATTATAGTCTTGCTCATGGGT TGTTGGGTACTCCTGGAGCGTTTGTTAGACAATTTATGCCGTTTGGAACA ATTTGCAGACGGAAGTTACGGTGCTTTTCGAGGTGGTTTTTGTTGGCCTG ATGTGAGTATCAGACAAAAGAAGAGGGAGTCTCTGCTTTCTCTTTGATCC TCCCGTTAGCGGGCGGACTTAACGCTTGTGTTTCACTCTATTGCCAGGCA GTAGCAAGCGATGAATAGAAAGAACTGAAGAAAAAAATGGCCGATGCACA ACTTGATGCGATCACTTTGGCTCATTGTGCGGAATGTGTATTAGGCATAT GCTCGTGACCAACTTGGAAAGACTTCCTCTAGTGAAGTAGGTGCATTCCA CAAAACTTTCGCAATACTAAGGTGGATTGTTGCAGCTTCCTCACGAAACT ATCAAGCACGAATGAAATCATCCTCAAATTTAAGAGAATGGAGAGAAGAA AGCATCAACGTATTAATGGGGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig15994:892..5514+

>mRNA_H-paniculata_contig15994.3474.1 ID=mRNA_H-paniculata_contig15994.3474.1|Name=mRNA_H-paniculata_contig15994.3474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig15994:892..5514+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCTTGCCGTAGTTGCCGTCGCCATGTCCGCCCTCAGCGTGGAGGG
TTTCGCCCCGTCTTCTGCCTTCAACGGGGCAGGCCTCGCACGCGCTGCGC
ACACCCGTGCGTCAACCTCCGCGGTCGACATGTCTGTCGCAGACGACTTC
AAGAAGGCAGCAACGGGTGCCCTCGCTGTGTTCGCAGGTCTTTCGTTGAT
CGTTCAGGCGCCGCCAGCAGAGGCTATCACCCGGGACGCGTTGGACTCCC
TCTCGTACACGCAGGTGAAGGGCACGGGGCTGGCGAACCGATGCCCTGAC
GTGATTGGAGAGGAGACGATCAGCGTGGGTGGCAGCTCTAAGATTATTGA
CATGTGCATCGAGCCCAAGACCTTCCAAGTGTTGTCGCGGATGAAGCTTG
CCGTAGTTGCCGTCGCCATGTCCGCCCTCAGCGTGGAGGGTTTCGCCCCG
TCTTCTGCCTTCAACGGGGCAGGCCTCGCACGCGCTGCGCACACCCGTGC
GTCAACCTCCGCGGTCGACATGTCTGTCGCAGACGACTTCAAGAAGGCAG
CAACGGGTGCCCTCGCTGTGTTCGCAGGTCTTTCGTTGATCGTTCAGGCG
CCGCCAGCAGAGGCTATCACCCGGGACGCGTTGGACTCCCTCTCGTACAC
GCAGGTGAAGGGCACGGGGCTGGCGAACCGATGCCCTGACGTGATTGGAG
AGGAGACGATCAGCGTGGGTGGCAGCTCTAAGATTATTGACATGTGCATC
GAGCCCAAGACCTTCCAAGTGTTGTCGCGGGTGGCAAGGGGAGGTAACAT
GGTGTCGCAATATGTGGACTCGAAGCTCATGACGCGTGAGACGTACACCT
TGTATGGTATCGAGGGAGACTTCAAGAGCGATGGAGGCAAGCTCACCTTC
TCCGAGAAGGTGGCAAGGGGAGGTAACATGGTGTCGCAATATGTGGACTC
GAAGCTCATGACGCGTGAGACGTACACCTTGTATGGTATCGAGGGAGACT
TCAAGAGCGATGGAGGCAAGCTCACCTTCTCCGAGAAGGACGGCATCGAC
TACGCGGCCACCACCATCCAGTCCAACTACGAGCGTATCCCCTTCCTGTT
CACGGTGAAGGATTTGGTGGCGAAGGCCTCGACGGGGGGAAACCAGGTCA
AGCCCGGATTCCAAATGGGCGGACCCTTCACGGTGCCGTCATACCGCACG
GGTCTTTTCCTTGACCCCAAGGGCCGCGGTGGATCCACCGGTTACGACAT
GGCGGTCGCGCTGCCCGCGCTTCAGTCTGGTACCGAGGGAGACGCAGAGT
TGTTCAAGGAGAACAACAAGGACGGCATCGACTACGCGGCCACCACCATC
CAGTCCAACTACGAGCGTATCCCCTTCCTGTTCACGGTGAAGGATTTGGT
GGCGAAGGCCTCGACGGGGGGAAACCAGGTCAAGCCCGGATTCCAAATGG
GCGGACCCTTCACGGTGCCGTCATACCGCACGGGTCTTTTCCTTGACCCC
AAGGGCCGCGGTGGATCCACCGGTTACGACATGGCGGTCGCGCTGCCCGC
GCTTCAGTCTGGTACCGAGGGAGACGCAGAGTTGTTCAAGGAGAACAACA
AGGTATTCGATGTAACGCAGGGACAGATTGAGTTCGAGGTCAACCGGGTC
GACGCGGAAGCCAAGGAGATTGGCGGTGTATTTGTGTCGAAGCAGAAGGG
TGACACTGACATGGGAAGCAAGGTGCCCAAGGACATCCTCGTAAAGGGTA
TTCGATGTAACGCAGGGACAGATTGAGTTCGAGGTCAACCGGGTCGACGC
GGAAGCCAAGGAGATTGGCGGTGTATTTGTGTCGAAGCAGAAGGGTGACA
CTGACATGGGAAGCAAGGTGCCCAAGGACATCCTCGTAAAGGGTACCTTC
TACGCTCGCATCGATTAAGTACCTTCTACGCTCGCATCGATTAA
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