mRNA_H-paniculata_contig15994.3474.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPB1_FUCDI (Oxygen-evolving enhancer protein n=1 Tax=Fucus distichus TaxID=3012 RepID=E5RPB1_FUCDI) HSP 1 Score: 512 bits (1319), Expect = 2.010e-175 Identity = 269/325 (82.77%), Postives = 289/325 (88.92%), Query Frame = 1
Query: 1 MKLAVVAVAMSALS--VEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
MKLAV AVA+SALS + FAPSSAFNGA +A +TR+STSAV+M+V+DDFKKAA GALAVFAGLSL AP +EA+TRD LD+LSYTQVKGTGLANRCP+V GE+TISVGG S+IIDMCIEPK FQVLSRVARGG MV Q +D+KLMTRETYTLYGIEG+F + GKLTF EKDGIDYAATTIQSNYERIPFLFTVKDLVAKAS GGNQVKPGFQMGG F PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGDAELFKENNKVFDVT G IEFEVN+VD EA EIGGVFVSKQKGDTDMGSKVPKDILVKG FYARI+
Sbjct: 1 MKLAVTAVAISALSPAADAFAPSSAFNGARMASVKNTRSSTSAVEMNVSDDFKKAAAGALAVFAGLSLFTSAP-SEAVTRDTLDALSYTQVKGTGLANRCPEVRGEDTISVGGGSEIIDMCIEPKQFQVLSRVARGGKMVPQMIDTKLMTRETYTLYGIEGNFGNKDGKLTFEEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASEGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAELFKENNKVFDVTDGNIEFEVNKVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIE 324
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: D8LG03_ECTSI (Manganese stabilising protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG03_ECTSI) HSP 1 Score: 509 bits (1312), Expect = 2.380e-174 Identity = 271/325 (83.38%), Postives = 289/325 (88.92%), Query Frame = 1
Query: 1 MKLAVVAVAMSALSV-EGFAPSSAFNGAGLAR-AAHTRASTSAVDMSVADD-FKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARI 966
MKLAV+AVA+SALS + F PSSAFNGA +A AA TRASTSAV+MS A D FKKAATGALA+FAGLSL APP+EAITRD LD+LSYTQVKGTGLANRCPDV+GE+TISV G +KI+DMCIEPK FQVLS+VARGGNMV +D+KLMTRETYTLYGIEGDF + GKLTF+EKDGIDYAATTIQSNYERIPFLFTVKDLVAKAS GGNQVKPGFQMGG F PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGDAE+FKENNKVFDVT G IEFEVN VD EA EIGGVFVSKQKGDTDMGSKVPKDILVKG FYARI
Sbjct: 1 MKLAVIAVALSALSPSDAFVPSSAFNGARMAGPAATTRASTSAVEMSAASDSFKKAATGALAIFAGLSLFT-APPSEAITRDTLDALSYTQVKGTGLANRCPDVVGEDTISVSGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASAGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNTVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARI 324
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPA9_9STRA (Oxygen-evolving enhancer protein n=1 Tax=Botrydium granulatum TaxID=73013 RepID=E5RPA9_9STRA) HSP 1 Score: 422 bits (1085), Expect = 3.390e-140 Identity = 228/326 (69.94%), Postives = 258/326 (79.14%), Query Frame = 1
Query: 1 MKLAVVAVAMSALSVEGFAPSSAFNGAGLARAAHTRA-STSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVA-RGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
MK AV A++ALS +SAF L H +A S SAV MS DFK+AA GALAVFAGLS + A PAEAIT+D +DSLSY QVKGTGLANRCP+V+GE TI+V G +KI+D+CIEPK FQVL + R G + +YV++KLMTR+TYTLYGIEGD S+ GKL F+EKDGIDYAATT+Q ER+PFLFTVK+LVAKA+ GG+ V PGFQ GG F PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGD ELF ENNK FDVT GQIEFEVNRVDAEA EIGGVFVSKQKGDTDMGSKVPKD+LVKG FY R++
Sbjct: 1 MKTAVACAAVAALS-----GASAFQAPFLGSRVHGKATSASAVTMSAQQDFKQAAAGALAVFAGLSFL--AAPAEAITKDQIDSLSYMQVKGTGLANRCPEVVGEGTINVAGKTKIVDLCIEPKVFQVLEESSSRKGEVKKEYVNTKLMTRQTYTLYGIEGDLTSEDGKLVFTEKDGIDYAATTVQLPGGERVPFLFTVKELVAKAAKGGSSVAPGFQFGGAFKTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKELFDENNKTFDVTDGQIEFEVNRVDAEAGEIGGVFVSKQKGDTDMGSKVPKDMLVKGIFYGRLE 319
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A836CCR6_9STRA (Oxygen-evolving enhancer protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR6_9STRA) HSP 1 Score: 414 bits (1064), Expect = 4.890e-137 Identity = 221/326 (67.79%), Postives = 254/326 (77.91%), Query Frame = 1
Query: 1 MKLAVVAVAMSALSVEGFAPSSAFNGAGL-ARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLS-RVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
MK AV A++AL +SAF + +R A +SA+ MS DDFK AA GALAVFAGLS + A PA+AITRD +DSLSY QVKGTGLANRCP+V+GE +I+V G +++D+CIEPKTFQVL + R G +YV++KLMTR+TYTLYGIEG + GKLTF E+DGIDYAATT+Q ER+PFLFTVK+LVAKASTGGN +KPGFQ GG F PSYRTGLFLDPKGRGG TGYDMAVALP LQSG EGD E+FKENNK FDVT GQIEFEVNRVD +A EIGGVFVSKQKGDTDMGSK PKD+LVKG FY RI+
Sbjct: 1 MKAAVACAALAALG-----GASAFQAPFMGSRVAGKATQSSALSMSAQDDFKAAAAGALAVFAGLSFL--AAPAQAITRDQIDSLSYMQVKGTGLANRCPEVVGEGSITVNGKKQVVDLCIEPKTFQVLEEKEGRKGETKKEYVNTKLMTRQTYTLYGIEGSIAPEDGKLTFREQDGIDYAATTVQLPGGERVPFLFTVKELVAKASTGGNTIKPGFQFGGAFKTPSYRTGLFLDPKGRGGVTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTDGQIEFEVNRVDTDAGEIGGVFVSKQKGDTDMGSKTPKDMLVKGIFYGRIE 319
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPB0_VAUFR (Oxygen-evolving enhancer protein n=1 Tax=Vaucheria frigida TaxID=195983 RepID=E5RPB0_VAUFR) HSP 1 Score: 405 bits (1041), Expect = 1.560e-133 Identity = 219/325 (67.38%), Postives = 252/325 (77.54%), Query Frame = 1
Query: 1 MKLAVVAVAMSALS-VEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVA-RGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARI 966
MK+A+ VA+SA+S V F S F G+ + + + S M+ DDFK A GALAVFAGLS AP A+AIT+D +DSLSY QVKGTGLANRCP+VIG E+I+V G K++D+CIEPK FQVL A + G +YV++KLMTR+TYTLYGIEG F + GKLTF EKDGIDYAATT+Q ER+PFLFTVK+LVAKA+T GN V PGFQ GG F+ PSYRTGLFLDPKGRGGSTGYDMAVALP LQSG EGD E+FKENNK FDVT+GQIEFEVNRVDA A EIGGVFVS QKGDTDMGSK PKD+LVKG FY R+
Sbjct: 1 MKVAISCVALSAISSVSAFQTS--FVGSRVKSLSRDGVNMS---MTAQDDFKNVAVGALAVFAGLSFF-GAPAADAITKDQIDSLSYMQVKGTGLANRCPEVIGTESINVNGKMKLMDLCIEPKVFQVLEETATKKGETKKEYVNTKLMTRQTYTLYGIEGSFAPEEGKLTFREKDGIDYAATTVQLPGGERVPFLFTVKELVAKAATSGNSVAPGFQFGGGFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTKGQIEFEVNRVDASAGEIGGVFVSNQKGDTDMGSKTPKDVLVKGIFYGRL 319
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: B7SSL7_ELYCH (Photosystem II extrinsic protein O n=2 Tax=Eukaryota TaxID=2759 RepID=B7SSL7_ELYCH) HSP 1 Score: 395 bits (1016), Expect = 8.270e-130 Identity = 214/325 (65.85%), Postives = 249/325 (76.62%), Query Frame = 1
Query: 1 MKLAVVAVAMSALSVEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVA-RGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
MK+ VA+SA SV+ A AF AGL A S+SA+ MSV DD K A GAL + AG+S++ P EAIT+D ++SLSY QVKGTGLANRCP+V G +I V G +KI+DMCIEPKTFQVL + + G +YV++KLMTR+TYTLYGI+G F + GK+TF EKDGIDYAATTIQ ER+PFLFTVK+LVA+A+T GN V PG Q GGPF+ PSYRTGLFLDPKGRGGSTGYDMAVALP QSG EGDAELF ENNK FDVT+G IEFEVNRVD EIGGVFVSKQKGDTDMGSKVPKD+L+KG FY R++
Sbjct: 1 MKVPSALVALSAFSVKTSAFRPAF--AGLKTNAK---SSSALTMSVQDDIKTLAVGALTILAGVSILNA--PVEAITKDQIESLSYLQVKGTGLANRCPEVFGTGSIDVNGKTKIVDMCIEPKTFQVLEETSSKRGEAKKEYVNTKLMTRQTYTLYGIDGSFAPENGKITFREKDGIDYAATTIQLPGGERVPFLFTVKELVAQATTPGNSVTPGLQFGGPFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGKQSGIEGDAELFGENNKTFDVTKGNIEFEVNRVDPSNGEIGGVFVSKQKGDTDMGSKVPKDLLIKGIFYGRLE 318
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A7S2UVF7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVF7_9STRA) HSP 1 Score: 352 bits (904), Expect = 3.210e-113 Identity = 186/292 (63.70%), Postives = 226/292 (77.40%), Query Frame = 1
Query: 103 TRASTSAV-DMSVADDFKKAATGA-LAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
TR+S+S V MS ++ K AT A LA F GLS + P+ AIT + L LSY QVKGTGLANRCPDV+GE+TIS+ G K++DMCIEPK FQV + G S+YV++KLMTR+TYTL GI+GD K GK+ F+EKDGIDY+ATT+Q ER+PFLFTVK+LVAKA+ GG+ K G + G F PSYRTGLFLDPKGRGG+TGYDMAVALP +Q+G +GD EL+KENNK FDVT G+IEF++ +V+ E EIGGVFVS+QKGDTDMGSKVPKDIL+KG FYARI+
Sbjct: 27 TRSSSSTVMTMSAENNLPKIATAAALAAFTGLSAMA---PSNAITSEVLRQLSYEQVKGTGLANRCPDVVGEDTISISGKKKLVDMCIEPKIFQV-----KEG---SEYVNTKLMTRQTYTLDGIDGDIKMADGKIQFTEKDGIDYSATTVQLPGGERVPFLFTVKELVAKATEGGSDFKVGLGLSGDFRTPSYRTGLFLDPKGRGGTTGYDMAVALPGIQNGEDGDEELYKENNKTFDVTDGKIEFQIQKVNKEEGEIGGVFVSRQKGDTDMGSKVPKDILLKGIFYARIE 307
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: E5RPB2_9DINO (Oxygen-evolving enhancer protein n=1 Tax=Kryptoperidinium foliaceum TaxID=160619 RepID=E5RPB2_9DINO) HSP 1 Score: 352 bits (902), Expect = 6.380e-113 Identity = 178/280 (63.57%), Postives = 217/280 (77.50%), Query Frame = 1
Query: 133 SVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
S+ DD A ALA A LS++ Q PA+A+T+ ++ L+Y QVKGTGLANRCP+V+GE+TIS K++DMCIEPK + V + + G ++V+SK++TR+TYTL GIEG S+GG + F EK+GIDYAATT+Q ER+PFLFTVKDLVAK + G KPGFQMGG F+VPSYRTGLFLDPKGRGG+TGYDMAVALP LQSG EGD +LFKENNK FDVT G+IE EVN+V+A+ +EIGGVFV+ Q GDTDMGSKVPK IL KG FYAR+D
Sbjct: 32 SLKDDLANAGKVALAGAAALSIMAQ--PAQALTKSEINELTYLQVKGTGLANRCPEVVGEDTISPKNGQKLVDMCIEPKAWAVEEEIGKAGKTEKKFVNSKVVTRQTYTLDGIEGVLSSEGGNIVFKEKEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDFSVPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDDLFKENNKTFDVTTGRIEMEVNKVNADEQEIGGVFVATQLGDTDMGSKVPKKILTKGIFYARVD 307
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A7S0KYC8_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYC8_9STRA) HSP 1 Score: 352 bits (902), Expect = 6.600e-113 Identity = 180/286 (62.94%), Postives = 219/286 (76.57%), Query Frame = 1
Query: 115 TSAVDMSVADDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
+SA+ MS+ DD A ALA + +I Q PA+A+T+ ++SLSY QVKGTGLANRC +V+GE++I+ S++ +MCIEPK + V V +GG ++V+SK+MTR+TYTL GIEG+ GG + FSEK+GIDYA TTIQ ER+PFLFTVKDLVAK + G KPGFQMGG F PSYRTGLFLDPKGRGG+TGYDMAVALP LQSG EGDAELFKENNK FD+TQG+IE EVN+V+AE EIGGVFV+ Q GDTDMGSKVPK IL KG FYA+++
Sbjct: 27 SSAMQMSLKDDIANAGKAALAGAIAVGMIAQ--PAQALTKSEINSLSYLQVKGTGLANRCAEVVGEDSITPKAGSRLTEMCIEPKAWAVEEEVGKGGKTEKKFVNSKVMTRQTYTLEGIEGNLDVAGGNIVFSEKEGIDYAPTTIQLPGGERVPFLFTVKDLVAKGN--GGAFKPGFQMGGDFNTPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDAELFKENNKTFDITQGRIEMEVNKVNAEESEIGGVFVATQLGDTDMGSKVPKKILTKGIFYAKVE 308
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Match: A0A6U4A1N0_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U4A1N0_9STRA) HSP 1 Score: 349 bits (895), Expect = 7.100e-112 Identity = 178/277 (64.26%), Postives = 215/277 (77.62%), Query Frame = 1
Query: 142 DDFKKAATGALAVFAGLSLIVQAPPAEAITRDALDSLSYTQVKGTGLANRCPDVIGEETISVGGSSKIIDMCIEPKTFQVLSRVARGGNMVSQYVDSKLMTRETYTLYGIEGDFKSDGGKLTFSEKDGIDYAATTIQS-NYERIPFLFTVKDLVAKASTGGNQVKPGFQMGGPFTVPSYRTGLFLDPKGRGGSTGYDMAVALPALQSGTEGDAELFKENNKVFDVTQGQIEFEVNRVDAEAKEIGGVFVSKQKGDTDMGSKVPKDILVKGTFYARID 969
DD K A ALA +++ V A PA+AIT+ L+ LSY QVKGTGLANRCP+V+GE++I+ S ++DMCIEPK + V + +GG ++V+SK+MTR+TYTL GIEG +DGGK+ F+E++GIDYA TT+Q ER+PFLFTVKDL A + G KPGFQMGG F VPSYRTGLFLDPKGRGG+TGYDMAVALP LQSG EGD ELFKENNKVF+VTQG+IE EVN+V+A+ EIGGVFV+ Q GDTDMGSKVPK IL KG FYAR+D
Sbjct: 35 DDVAKVAGAALA--GAVAVGVAAAPAQAITKQELNQLSYLQVKGTGLANRCPEVVGEDSITPKSGSMLVDMCIEPKAWAVEEEIGKGGKTEKKFVNSKVMTRQTYTLDGIEGVLTTDGGKIVFTEQEGIDYAPTTVQMPGGERVPFLFTVKDLKATGNAGA--FKPGFQMGGDFNVPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDELFKENNKVFEVTQGRIEMEVNKVNADESEIGGVFVATQLGDTDMGSKVPKKILTKGIFYARVD 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15994.3474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15994.3474.1 >prot_H-paniculata_contig15994.3474.1 ID=prot_H-paniculata_contig15994.3474.1|Name=mRNA_H-paniculata_contig15994.3474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp MKLAVVAVAMSALSVEGFAPSSAFNGAGLARAAHTRASTSAVDMSVADDFback to top mRNA from alignment at H-paniculata_contig15994:892..5514+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15994.3474.1 ID=mRNA_H-paniculata_contig15994.3474.1|Name=mRNA_H-paniculata_contig15994.3474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4623bp|location=Sequence derived from alignment at H-paniculata_contig15994:892..5514+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15994:892..5514+ >mRNA_H-paniculata_contig15994.3474.1 ID=mRNA_H-paniculata_contig15994.3474.1|Name=mRNA_H-paniculata_contig15994.3474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig15994:892..5514+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |