prot_H-paniculata_contig15948.3449.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15948.3449.1
Unique Nameprot_H-paniculata_contig15948.3449.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length148
Homology
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 1.350e-48
Identity = 90/150 (60.00%), Postives = 106/150 (70.67%), Query Frame = 0
Query:    4 KGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGP--NDQRGVAAHGTRSQRSK---VREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            +G  YEFFPGSG+QD +  NIIN PL+PLWK    +D    A  G R  R +    R P+P         A+  RLLPALRAFNP L++LSAGFDAAKGDVGNCK   R + +GLDL++EDYLW+TE+IQ VADICC GKMVSVLEGGYG
Sbjct:  304 RGPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDV------LAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYG 447          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 2.430e-47
Identity = 90/150 (60.00%), Postives = 106/150 (70.67%), Query Frame = 0
Query:    4 KGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGP--NDQRGVAAHGTRSQRSK---VREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            +G  YEFFPGSG+QD +  NIIN PL+PLWK    +D    A  G R  R +    R P+P         A+  RLLPALRAFNP L++LSAGFDAAKGDVGNCK   R + +GLDL++EDYLW+TE+IQ VADICC GKMVSVLEGGYG
Sbjct: 1928 RGPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDV------LAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYG 2071          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A1E7FK49_9STRA (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK49_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.950e-47
Identity = 84/184 (45.65%), Postives = 108/184 (58.70%), Query Frame = 0
Query:    1 RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQ------------------------------RSKVREPEPRS-----GRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQ-GLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            R  K  +Y+F+PG+G++D +P NIIN P+ PLWK  N       H TR +                              RS+   P P +     GR  YR ++ +RLLPALRAFNPDL+L+SAGFDA KGDVGN KH   G  + G+DL  EDY W+T +I ++ADICCQG++VSVLEGGYG
Sbjct:   44 RESKSFQYKFYPGTGDEDDLPLNIINVPITPLWKEGNQTPVQREHNTRHRTRNRGSQSDDGSSSETGTPRVSDAEVESRIRSRASSPVPFNANAPGGRMAYRNSIQNRLLPALRAFNPDLILISAGFDACKGDVGNAKHEMGGKEKMGIDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 227          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.040e-44
Identity = 82/145 (56.55%), Postives = 99/145 (68.28%), Query Frame = 0
Query:    8 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPEPR----SGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            YEFFPGSG  D    NIIN P+ PLW+         A G R      R   P     SGR+ +REA+T+RLLPALRAFNP L+L+S+GFDA +GDVGN KH+R   A G DLT  DY W TER+Q+VAD+CC+G++VSVLEGGYG
Sbjct:  140 YEFFPGSGAGDDTALNIINVPVQPLWR---------AKGGRGGGGXXRGGPPGVANGSGRAAFREAITARLLPALRAFNPQLILMSSGFDAVEGDVGNAKHARHSHA-GCDLTPSDYAWITERVQEVADMCCEGRLVSVLEGGYG 274          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A836C9L4_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.040e-43
Identity = 79/141 (56.03%), Postives = 96/141 (68.09%), Query Frame = 0
Query:    8 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            Y+FFPGSG  D    NIINAP+ PLW+     RG  +  TRS            GR  +REA+ +RLLP LRAFNP L+L+S+GFDA +GDVGN +H+R G   G DLT  DY W TERIQ+VAD+CC G++VSVLEGGYG
Sbjct:  325 YQFFPGSGSVDDTALNIINAPVQPLWR----SRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHAR-GKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYG 460          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.520e-43
Identity = 85/184 (46.20%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    1 RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQR-----------------SKVREPE-----PRS-------------GRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQ-GLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            R  K  +Y+F+PG+G++D +P NIIN P+ PLWK  N       H TR Q                  S++ + E     PR+             GR  YR+++ SRLLPALRAFNPDL+L+SAGFDA KGDVGN KH   G  + G+DL  EDY W+T ++ ++ADICCQG++VSVLEGGYG
Sbjct:  999 RETKSFQYKFYPGTGDEDDLPLNIINVPITPLWKDSNQIPVGGTHNTRRQTRKRASQSDDGSSSETGTSRLSDAEVDPKLPRASSPTTSGSSGAGGGRQAYRKSIQSRLLPALRAFNPDLILISAGFDACKGDVGNAKHEIGGKEKMGIDLEPEDYAWTTSKVLEIADICCQGRVVSVLEGGYG 1182          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.700e-41
Identity = 82/184 (44.57%), Postives = 108/184 (58.70%), Query Frame = 0
Query:    1 RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPE----------------------------PRS--------GRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            R  K  +Y+F+PG+G++D +P NIIN P+ PLWK  N  +    H TR  R+++R  +                            P S        GR  YR+A+ +RLL ALRAFNPDL+L+SAGFDA KGDVGN KH       G+DL  EDY W+T +I ++ADICC+G++VSVLEGGYG
Sbjct: 1013 RETKSFQYKFYPGTGDEDDLPLNIINVPITPLWKEGNQFQIGGTHNTR-HRTRIRANQSDDGSSSETGTPKVSDAEVDIKMSRASSPTSFSSSGSGGGRQAYRKAIQNRLLXALRAFNPDLILISAGFDACKGDVGNAKHLGGKEKMGIDLEPEDYAWTTRKILEIADICCKGRVVSVLEGGYG 1195          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.060e-39
Identity = 81/183 (44.26%), Postives = 107/183 (58.47%), Query Frame = 0
Query:    7 EYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVA--AHGTR----------------------------------SQRSKVREPEP----RSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQ-GLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            +Y+F+PG+G +D +  NI+N P+ PLW+  N     A   H TR                                  S  +    P+P     SGR  YR+A+ +RLLPALRAFNPDL+L+SAGFDAA+GDVGN +H R G  + GLDL +EDY W+T +I ++ADICC G++VSVLEGGYG
Sbjct:  909 QYKFYPGTGSEDDLALNILNVPIQPLWRDQNPPATPALRTHNTRHKAKGAPKSTSDTQDDSSVGTPRGSAKNSDVEAGSMSAGSTTPQPGSGGSSGRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYG 1091          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A7S2DA28_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DA28_9STRA)

HSP 1 Score: 142 bits (359), Expect = 7.960e-38
Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = 0
Query:    8 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGV--AAHGTRSQRSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHS----------RRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            YEF+PGSG  D    NIIN PL PLW+  +   G   +AH            +PR+GR+ +R+A+++RL+P LRAFNP+L+LLS GFDA   D+GN + +            G A G+DLT  D  W T+ IQ++AD+CC G++VSVLEGGYG
Sbjct:  217 YEFYPGSGSGDDTVHNIINVPLMPLWRPSHPHLGNPRSAHSPSEADDAAAGADPRAGRNAFRKAISARLVPTLRAFNPELILLSTGFDALAEDLGNARPTPGDLTAAPVVNAGGAMGIDLTPNDLFWVTKEIQKIADMCCGGRIVSVLEGGYG 369          
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A7S3HLI7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLI7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.780e-35
Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 0
Query:    8 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKH-SRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 148
            YEF+PG+G +D    NI+N PL PLW   +    V+A        KV +    SGR  YR+A+  RL+P+LRAFNP L+LLS GFDAA GDVGN +     G+  G+DL  ED+ W+T  I ++ADICC G++VSVLEGGYG
Sbjct:  147 YEFYPGTGVKDDHIHNIVNVPLLPLWAKDDP---VSA--------KVSQL---SGREGYRQAIQQRLIPSLRAFNPTLILLSIGFDAAAGDVGNTRQIPGEGTRMGIDLLPEDFAWATTEIMKIADICCSGRLVSVLEGGYG 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG61_ECTSI1.350e-4860.00Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LG60_ECTSI2.430e-4760.00Histone deactylase of possible bacterial origin wi... [more]
A0A1E7FK49_9STRA3.950e-4745.65Hist_deacetyl domain-containing protein (Fragment)... [more]
A0A835YI51_9STRA1.040e-4456.55Histone deacetylase domain-containing protein n=1 ... [more]
A0A836C9L4_9STRA3.040e-4356.03Hist_deacetyl domain-containing protein n=1 Tax=Tr... [more]
A0A7S4AC53_9STRA3.520e-4346.20Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448YY97_9STRA2.700e-4144.57Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6S8HTR1_9STRA2.060e-3944.26Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2DA28_9STRA7.960e-3846.41Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S3HLI7_9STRA1.780e-3550.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 3..148
e-value: 2.6E-25
score: 91.1
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 8..147
e-value: 1.0E-18
score: 67.9
NoneNo IPR availablePANTHERPTHR45634:SF15coord: 5..148
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 5..148
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 10..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15948contigH-paniculata_contig15948:2672..4537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15948.3449.1mRNA_H-paniculata_contig15948.3449.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15948 2672..4537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15948.3449.1 ID=prot_H-paniculata_contig15948.3449.1|Name=mRNA_H-paniculata_contig15948.3449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQ
RSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVG
NCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037138His_deacetylse_dom_sf
IPR023801His_deacetylse_dom
IPR023696Ureohydrolase_dom_sf