mRNA_H-paniculata_contig15948.3449.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI) HSP 1 Score: 173 bits (439), Expect = 1.350e-48 Identity = 90/150 (60.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 10 KGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGP--NDQRGVAAHGTRSQRSK---VREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
+G YEFFPGSG+QD + NIIN PL+PLWK +D A G R R + R P+P A+ RLLPALRAFNP L++LSAGFDAAKGDVGNCK R + +GLDL++EDYLW+TE+IQ VADICC GKMVSVLEGGYG
Sbjct: 304 RGPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDV------LAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYG 447
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI) HSP 1 Score: 173 bits (439), Expect = 2.430e-47 Identity = 90/150 (60.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 10 KGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGP--NDQRGVAAHGTRSQRSK---VREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
+G YEFFPGSG+QD + NIIN PL+PLWK +D A G R R + R P+P A+ RLLPALRAFNP L++LSAGFDAAKGDVGNCK R + +GLDL++EDYLW+TE+IQ VADICC GKMVSVLEGGYG
Sbjct: 1928 RGPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDV------LAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYG 2071
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A1E7FK49_9STRA (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK49_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.950e-47 Identity = 84/184 (45.65%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1 RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQ------------------------------RSKVREPEPRS-----GRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQ-GLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
R K +Y+F+PG+G++D +P NIIN P+ PLWK N H TR + RS+ P P + GR YR ++ +RLLPALRAFNPDL+L+SAGFDA KGDVGN KH G + G+DL EDY W+T +I ++ADICCQG++VSVLEGGYG
Sbjct: 44 RESKSFQYKFYPGTGDEDDLPLNIINVPITPLWKEGNQTPVQREHNTRHRTRNRGSQSDDGSSSETGTPRVSDAEVESRIRSRASSPVPFNANAPGGRMAYRNSIQNRLLPALRAFNPDLILISAGFDACKGDVGNAKHEMGGKEKMGIDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 227
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.040e-44 Identity = 82/145 (56.55%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 22 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPEPR----SGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
YEFFPGSG D NIIN P+ PLW+ A G R R P SGR+ +REA+T+RLLPALRAFNP L+L+S+GFDA +GDVGN KH+R A G DLT DY W TER+Q+VAD+CC+G++VSVLEGGYG
Sbjct: 140 YEFFPGSGAGDDTALNIINVPVQPLWR---------AKGGRGGGGXXRGGPPGVANGSGRAAFREAITARLLPALRAFNPQLILMSSGFDAVEGDVGNAKHARHSHA-GCDLTPSDYAWITERVQEVADMCCEGRLVSVLEGGYG 274
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A836C9L4_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L4_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.040e-43 Identity = 79/141 (56.03%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 22 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
Y+FFPGSG D NIINAP+ PLW+ RG + TRS GR +REA+ +RLLP LRAFNP L+L+S+GFDA +GDVGN +H+R G G DLT DY W TERIQ+VAD+CC G++VSVLEGGYG
Sbjct: 325 YQFFPGSGSVDDTALNIINAPVQPLWR----SRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHAR-GKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYG 460
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.520e-43 Identity = 85/184 (46.20%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 1 RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQR-----------------SKVREPE-----PRS-------------GRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQ-GLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
R K +Y+F+PG+G++D +P NIIN P+ PLWK N H TR Q S++ + E PR+ GR YR+++ SRLLPALRAFNPDL+L+SAGFDA KGDVGN KH G + G+DL EDY W+T ++ ++ADICCQG++VSVLEGGYG
Sbjct: 999 RETKSFQYKFYPGTGDEDDLPLNIINVPITPLWKDSNQIPVGGTHNTRRQTRKRASQSDDGSSSETGTSRLSDAEVDPKLPRASSPTTSGSSGAGGGRQAYRKSIQSRLLPALRAFNPDLILISAGFDACKGDVGNAKHEIGGKEKMGIDLEPEDYAWTTSKVLEIADICCQGRVVSVLEGGYG 1182
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.700e-41 Identity = 82/184 (44.57%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1 RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPE----------------------------PRS--------GRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
R K +Y+F+PG+G++D +P NIIN P+ PLWK N + H TR R+++R + P S GR YR+A+ +RLL ALRAFNPDL+L+SAGFDA KGDVGN KH G+DL EDY W+T +I ++ADICC+G++VSVLEGGYG
Sbjct: 1013 RETKSFQYKFYPGTGDEDDLPLNIINVPITPLWKEGNQFQIGGTHNTR-HRTRIRANQSDDGSSSETGTPKVSDAEVDIKMSRASSPTSFSSSGSGGGRQAYRKAIQNRLLXALRAFNPDLILISAGFDACKGDVGNAKHLGGKEKMGIDLEPEDYAWTTRKILEIADICCKGRVVSVLEGGYG 1195
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.060e-39 Identity = 81/183 (44.26%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 19 EYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVA--AHGTR----------------------------------SQRSKVREPEP----RSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHSRRGSAQ-GLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
+Y+F+PG+G +D + NI+N P+ PLW+ N A H TR S + P+P SGR YR+A+ +RLLPALRAFNPDL+L+SAGFDAA+GDVGN +H R G + GLDL +EDY W+T +I ++ADICC G++VSVLEGGYG
Sbjct: 909 QYKFYPGTGSEDDLALNILNVPIQPLWRDQNPPATPALRTHNTRHKAKGAPKSTSDTQDDSSVGTPRGSAKNSDVEAGSMSAGSTTPQPGSGGSSGRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYG 1091
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A7S2DA28_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DA28_9STRA) HSP 1 Score: 142 bits (359), Expect = 7.960e-38 Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = 1
Query: 22 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGV--AAHGTRSQRSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKHS----------RRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
YEF+PGSG D NIIN PL PLW+ + G +AH +PR+GR+ +R+A+++RL+P LRAFNP+L+LLS GFDA D+GN + + G A G+DLT D W T+ IQ++AD+CC G++VSVLEGGYG
Sbjct: 217 YEFYPGSGSGDDTVHNIINVPLMPLWRPSHPHLGNPRSAHSPSEADDAAAGADPRAGRNAFRKAISARLVPTLRAFNPELILLSTGFDALAEDLGNARPTPGDLTAAPVVNAGGAMGIDLTPNDLFWVTKEIQKIADMCCGGRIVSVLEGGYG 369
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Match: A0A7S3HLI7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLI7_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.780e-35 Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 22 YEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQRSKVREPEPRSGRSCYREALTSRLLPALRAFNPDLVLLSAGFDAAKGDVGNCKH-SRRGSAQGLDLTAEDYLWSTERIQQVADICCQGKMVSVLEGGYG 444
YEF+PG+G +D NI+N PL PLW + V+A KV + SGR YR+A+ RL+P+LRAFNP L+LLS GFDAA GDVGN + G+ G+DL ED+ W+T I ++ADICC G++VSVLEGGYG
Sbjct: 147 YEFYPGTGVKDDHIHNIVNVPLLPLWAKDDP---VSA--------KVSQL---SGREGYRQAIQQRLIPSLRAFNPTLILLSIGFDAAAGDVGNTRQIPGEGTRMGIDLLPEDFAWATTEIMKIADICCSGRLVSVLEGGYG 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15948.3449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15948.3449.1 >prot_H-paniculata_contig15948.3449.1 ID=prot_H-paniculata_contig15948.3449.1|Name=mRNA_H-paniculata_contig15948.3449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp RNLKGAEYEFFPGSGEQDYIPGNIINAPLNPLWKGPNDQRGVAAHGTRSQback to top mRNA from alignment at H-paniculata_contig15948:2672..4537+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15948.3449.1 ID=mRNA_H-paniculata_contig15948.3449.1|Name=mRNA_H-paniculata_contig15948.3449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1866bp|location=Sequence derived from alignment at H-paniculata_contig15948:2672..4537+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15948:2672..4537+ >mRNA_H-paniculata_contig15948.3449.1 ID=mRNA_H-paniculata_contig15948.3449.1|Name=mRNA_H-paniculata_contig15948.3449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig15948:2672..4537+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |