prot_H-paniculata_contig15935.3439.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15935.3439.1
Unique Nameprot_H-paniculata_contig15935.3439.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 3.050e-33
Identity = 60/78 (76.92%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    1 MLWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRKLK 78
            MLWQ +R TGDYHDA+TDKMFM+WLE RL PAFK  + NKKMILVLDNASYHHGYD EVGVPE+ SK YN  LLRK K
Sbjct:  357 MLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYK 434          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5K9W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W3_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.950e-32
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQV+  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVLDNASYHH +D EV VPET SKKYNV+LLRK
Sbjct:   10 LWQVKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRK 84          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5JRA8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA8_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 7.530e-30
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVL+NASYHH +D EV VPET SKKYNV+LLRK
Sbjct:   86 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDPQFKNKKMFLVLNNASYHHCFDEEVKVPETNSKKYNVELLRK 160          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5K2A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A0_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 7.700e-30
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVLDNASYHH +D EV VPET SKK NVDLLRK
Sbjct:   64 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKNNVDLLRK 138          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5KEG4_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG4_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.480e-29
Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKI--FPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLR 75
            LWQ +   GDYH A+TD MFM+WLEHRL PA+  I  F  K+MILVLDNASYHHG+D EV VPET +KK+NVDLLR
Sbjct:   10 LWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLR 85          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5K658_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K658_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 4.220e-29
Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRKLKSSLLQ 83
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKK+ LVLD+ASYHH +D E+ VPET SKKYNV+LLRK   +L +
Sbjct:  151 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKIFLVLDSASYHHCFDEELKVPETNSKKYNVELLRKYGCTLFK 232          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.560e-29
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVLDNASYHH +D EV VPET SKKYNV+LLRK
Sbjct:  203 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRK 277          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 5.660e-29
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVLDNASYHH +D EV VPET SKKYNV+LLRK
Sbjct:  285 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRK 359          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 6.110e-29
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVLDNASYHH +D EV VPET SKKYNV+LLRK
Sbjct:  241 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRK 315          
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.010e-28
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    2 LWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNASYHHGYDPEVGVPETKSKKYNVDLLRK 76
            LWQ +  TGDYH+A+TD MFM WL+HRL PAF   F NKKM LVLDNASYHH +D EV VPET SKKYNV+LLRK
Sbjct:  362 LWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRK 436          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15935.3439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ25_ECTSI3.050e-3376.92Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5K9W3_9PHAE1.950e-3273.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRA8_9PHAE7.530e-3070.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K2A0_9PHAE7.700e-3072.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEG4_9PHAE1.480e-2968.42DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K658_9PHAE4.220e-2963.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LE74_9PHAE4.560e-2972.00Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP14_9PHAE5.660e-2972.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCN2_9PHAE6.110e-2972.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX2_9PHAE1.010e-2872.00Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 16..74
e-value: 2.1E-4
score: 21.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15935contigH-paniculata_contig15935:5280..5552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15935.3439.1mRNA_H-paniculata_contig15935.3439.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15935 5250..5552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15935.3439.1 ID=prot_H-paniculata_contig15935.3439.1|Name=mRNA_H-paniculata_contig15935.3439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
MLWQVRRTTGDYHDALTDKMFMDWLEHRLKPAFKKIFPNKKMILVLDNAS
YHHGYDPEVGVPETKSKKYNVDLLRKLKSSLLQSPVRSCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom