prot_H-paniculata_contig15931.3437.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15931.3437.1
Unique Nameprot_H-paniculata_contig15931.3437.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A6H5KCS3_9PHAE (Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCS3_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 5.320e-93
Identity = 141/165 (85.45%), Postives = 151/165 (91.52%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGKE 165
            MLVECLVSDFRGD  AVDRLATSGLDVYAHN+ETVRRLQP+VRD RAGYDQSL+VL RAK AG   GVYTKTSLMLGLGETEEE+ ETMRDLR AGVDVLTLGQYLRPT+HHLAVV+YVTPE FD+YAR G+ALGF YVASGPMVRSSYKAGEFFMENMIR G++
Sbjct:  206 MLVECLVSDFRGDYAAVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLRRAKIAGEATGVYTKTSLMLGLGETEEEILETMRDLREAGVDVLTLGQYLRPTDHHLAVVDYVTPEKFDQYARQGDALGFSYVASGPMVRSSYKAGEFFMENMIRRGRQ 370          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A835ZC82_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC82_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.750e-80
Identity = 127/164 (77.44%), Postives = 138/164 (84.15%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGK 164
            MLVECLVSDFRGD  AV RLATSGLDVYAHNVETV RLQ HVRD RAGY QSL VL  AK   A   +YTKTSLMLGLGETE EV +TMRD+R AGVDVLTLGQYLRPT+HHLAVVEYV P  FD Y   GEA+GFKYVASGP+VRSSYKAGEF++E+M+RSG+
Sbjct:  133 MLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAK--AARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGR 294          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A7S0N260_9CRYP (Lipoyl synthase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N260_9CRYP)

HSP 1 Score: 251 bits (641), Expect = 3.850e-79
Identity = 128/166 (77.11%), Postives = 144/166 (86.75%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGKES 166
            +LVECLVSDF+G E +V  LA SGLDVYAHN+ETVRRLQPHVRD RAGYDQSL VL  AKEA A  G+YTK+S+MLGLGET EEVRETMRDLRAAGVDV+TLGQYLRPTE HLAV EYVTPE FD Y  +G  LGF+YVASGPMVRSSYKAGEFF+E+MI++ +E+
Sbjct:  267 ILVECLVSDFQGMEDSVRELARSGLDVYAHNIETVRRLQPHVRDRRAGYDQSLRVLGLAKEARA--GLYTKSSIMLGLGETVEEVRETMRDLRAAGVDVVTLGQYLRPTEAHLAVEEYVTPEAFDAYREYGMELGFRYVASGPMVRSSYKAGEFFLEHMIKTDREA 430          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A7S0TJ40_HEMAN (Lipoyl synthase, mitochondrial n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TJ40_HEMAN)

HSP 1 Score: 243 bits (620), Expect = 1.270e-78
Identity = 123/161 (76.40%), Postives = 139/161 (86.34%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIR 161
            +LVECLVSDFRGDE+AV  LA SGLDVYAHN+ETV RLQP VRD RAGY+QSL VL RAKE   + GVYTKTS+MLGLGET +EV +TM+DLR AGVDVLTLGQYLRP++ HLAV EYVTPE FDEY   G A+GF+YVASGPMVRSSYKAGEFF+E+MI+
Sbjct:   60 ILVECLVSDFRGDEEAVRHLAGSGLDVYAHNIETVERLQPFVRDHRAGYEQSLRVLRRAKEF--QEGVYTKTSIMLGLGETRDEVIQTMKDLREAGVDVLTLGQYLRPSDKHLAVEEYVTPEQFDEYREIGNAMGFRYVASGPMVRSSYKAGEFFLEHMIK 218          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A7S3RYP2_9SPIT (Lipoyl synthase, mitochondrial n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RYP2_9SPIT)

HSP 1 Score: 240 bits (613), Expect = 7.370e-77
Identity = 123/164 (75.00%), Postives = 139/164 (84.76%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMG--VYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRS 162
            +LVECLVSDF GD++A+  LA SGLDVYAHNVETVRRLQ +VRD RAGYDQSL  L+ AK+  A  G  +YTKTSLMLGLGET+EEV   MRD+RAA VDVLTLGQYLRPT+HHLAVVEYVTPE FDE    GE +GF+YVASGPMVRSSYKAGEFFM+NMI++
Sbjct:  133 ILVECLVSDFAGDQEAIRTLALSGLDVYAHNVETVRRLQSYVRDRRAGYDQSLQGLAAAKKMAAAEGRRLYTKTSLMLGLGETKEEVLAAMRDMRAADVDVLTLGQYLRPTDHHLAVVEYVTPEVFDELRVAGEEMGFRYVASGPMVRSSYKAGEFFMQNMIKA 296          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: R7QN44_CHOCR (Lipoyl synthase, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN44_CHOCR)

HSP 1 Score: 239 bits (611), Expect = 1.950e-76
Identity = 122/164 (74.39%), Postives = 138/164 (84.15%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGK 164
            MLVECLVSDFRGD  AVDRLA SGLDVYAHNVETV+RLQ +VRD RA Y+QSL+VL RAKE+G    VYTKTSLMLGLGET EEVR+ M D+R AGVDVLTLGQYLRPTE HL+VVEYVTPE F  +   G+ +GF+YVA+GP+VRSSYKAGE+F+ NMIR  K
Sbjct:  153 MLVECLVSDFRGDFAAVDRLANSGLDVYAHNVETVQRLQRYVRDPRASYEQSLSVLKRAKESG----VYTKTSLMLGLGETNEEVRQAMLDIREAGVDVLTLGQYLRPTERHLSVVEYVTPERFRLWEEEGKEMGFRYVAAGPLVRSSYKAGEYFLNNMIRQDK 312          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A7S2UUF0_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF0_9STRA)

HSP 1 Score: 241 bits (614), Expect = 4.860e-76
Identity = 124/167 (74.25%), Postives = 139/167 (83.23%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMG--VYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGKE 165
            +LVECLVSDF GD  +V+ LA SGLDVYAHNVETVRRLQ  VRD RA YDQSL VL  AK+   + G  +YTKTSLMLGLGETEEEV + MRDLRAA VDV+T GQYLRPTEHHLAVVEYV P+ FD Y R GE +GFKYVASGPMVRSSYKAGEFFME+MI++G++
Sbjct:  215 ILVECLVSDFAGDLSSVETLALSGLDVYAHNVETVRRLQGFVRDKRAEYDQSLKVLKHAKQVAQKDGRDLYTKTSLMLGLGETEEEVIQCMRDLRAADVDVVTFGQYLRPTEHHLAVVEYVHPDKFDNYRRIGEEMGFKYVASGPMVRSSYKAGEFFMEHMIKTGRK 381          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: W7T3L4_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3L4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 4.790e-75
Identity = 124/170 (72.94%), Postives = 138/170 (81.18%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGKESGAGQ 170
            MLVECLVSDFRGD  AV+RLATSGLDVYAHNVETV RLQ +VRD RA Y QSL VL+ AK   A+  VYTKTSLMLGLGE E EV E MRD+RA  VDVLTLGQYLRPT+HHLAVVEYVTPE FD + + GE +GFKYVASGP+VRSSYKAGEFF+EN ++  K   A +
Sbjct:  204 MLVECLVSDFRGDLAAVERLATSGLDVYAHNVETVERLQKYVRDKRASYTQSLQVLAHAK--AAQPTVYTKTSLMLGLGEEEGEVLEAMRDMRAHNVDVLTLGQYLRPTDHHLAVVEYVTPEKFDFFRKQGEEMGFKYVASGPLVRSSYKAGEFFLENELKRVKAKRAAE 371          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: A0A0G4EX03_VITBC (Lipoyl synthase, mitochondrial n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX03_VITBC)

HSP 1 Score: 234 bits (596), Expect = 1.190e-73
Identity = 118/168 (70.24%), Postives = 141/168 (83.93%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGKESGA 168
            +LVECLVSDF+GD++AV+RLATSGLDVYAHNVETV RLQ  VRD RA Y QSL VL +AKEA  E  VYTKTSLMLGLGETE+EV +TM+DLR    DV+T GQYLRPT+HHL+VVEY+TP+ F +Y R GE +GF+YVASGP+VRSSYKAGE+FM NMI + +++ A
Sbjct:  186 ILVECLVSDFQGDKEAVERLATSGLDVYAHNVETVERLQRFVRDKRANYKQSLDVLRQAKEA--EPRVYTKTSLMLGLGETEDEVIQTMKDLRDIDCDVITFGQYLRPTDHHLSVVEYITPDKFAKYGRLGEEMGFRYVASGPLVRSSYKAGEYFMTNMINTDRDNEA 351          
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Match: LIPA2_PHATC (Lipoyl synthase 2, mitochondrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=LIPA2_PHATC)

HSP 1 Score: 232 bits (592), Expect = 1.420e-73
Identity = 118/168 (70.24%), Postives = 136/168 (80.95%), Query Frame = 0
Query:    1 MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYDQSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVLTLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYKAGEFFMENMIRSGKESGA 168
            +LVECLVSDF+G   +V+ LA SGLDVYAHNVETV RLQP VRD+RA Y QSL+ L  AK    E+  YTKTS+MLGLGETEEEV +TM DLRA GVDV+T GQYLRPTEHHL+VVEYVTPE FD Y + GE +GFKYVASGPMVRSSYKAGEF++E+MI+  +   A
Sbjct:  142 LLVECLVSDFQGMLDSVETLALSGLDVYAHNVETVERLQPFVRDARANYQQSLSTLQHAKVVKPEL--YTKTSIMLGLGETEEEVTQTMTDLRAIGVDVVTFGQYLRPTEHHLSVVEYVTPEKFDHYRQVGENMGFKYVASGPMVRSSYKAGEFYLEHMIKKERTEAA 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15931.3437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCS3_9PHAE5.320e-9385.45Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus ... [more]
A0A835ZC82_9STRA3.750e-8077.44Lipoyl synthase, mitochondrial n=1 Tax=Tribonema m... [more]
A0A7S0N260_9CRYP3.850e-7977.11Lipoyl synthase (Fragment) n=1 Tax=Cryptomonas cur... [more]
A0A7S0TJ40_HEMAN1.270e-7876.40Lipoyl synthase, mitochondrial n=2 Tax=Hemiselmis ... [more]
A0A7S3RYP2_9SPIT7.370e-7775.00Lipoyl synthase, mitochondrial n=1 Tax=Strombidino... [more]
R7QN44_CHOCR1.950e-7674.39Lipoyl synthase, mitochondrial n=1 Tax=Chondrus cr... [more]
A0A7S2UUF0_9STRA4.860e-7674.25Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa ... [more]
W7T3L4_9STRA4.790e-7572.94Lipoyl synthase, mitochondrial n=2 Tax=Monodopsida... [more]
A0A0G4EX03_VITBC1.190e-7370.24Lipoyl synthase, mitochondrial n=2 Tax=Vitrella br... [more]
LIPA2_PHATC1.420e-7370.24Lipoyl synthase 2, mitochondrial n=2 Tax=Phaeodact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 5..151
e-value: 1.1E-11
score: 46.2
IPR003698Lipoyl synthasePANTHERPTHR10949LIPOYL SYNTHASEcoord: 1..165
NoneNo IPR availablePANTHERPTHR10949:SF30LIPOYL SYNTHASE, CHLOROPLASTICcoord: 1..165
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 6..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15931contigH-paniculata_contig15931:1029..5766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15931.3437.1mRNA_H-paniculata_contig15931.3437.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15931 534..6066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15931.3437.1 ID=prot_H-paniculata_contig15931.3437.1|Name=mRNA_H-paniculata_contig15931.3437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MLVECLVSDFRGDEKAVDRLATSGLDVYAHNVETVRRLQPHVRDSRAGYD
QSLAVLSRAKEAGAEMGVYTKTSLMLGLGETEEEVRETMRDLRAAGVDVL
TLGQYLRPTEHHLAVVEYVTPETFDEYARHGEALGFKYVASGPMVRSSYK
AGEFFMENMIRSGKESGAGQGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR003698Lipoyl_synth