mRNA_H-paniculata_contig15824.3384.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15824.3384.1
Unique NamemRNA_H-paniculata_contig15824.3384.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 1.950e-158
Identity = 257/645 (39.84%), Postives = 386/645 (59.84%), Query Frame = 3
Query:  354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            GCGA+H  +  L+   + DP  + R E+L  +R  +         + W+Q S G+   LD  ++ D   R++ V +V+         L  H   L+N +++     +    TPLS +R +KL ++LP +L   DG+++R+ R+ ++KR DIS VLPWL+ YT+AA+AR R         D++++A   CR  G + +AARALL+D+ +P N++T+ ++ AKF  ED   +  A A AIAAS      G    WRP+ E++P+ L+  V  +++ S AGNDG RFSH + I+NT  G+E F   + S WRR ++ P AFPPEFW L  Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + +   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+   R ++  LGV L AY+DD+ L   D+T EN++    LV EL  +G+ +N  K   +PP  H  T  E   L   G+ +AE  G  VVG PIG DA+V+  A+ V+ E GA+ LARLL  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   DN  +W+L
Sbjct:  111 GCGAQHSRRDSLEAAVQADPGLQLRAESL--IRGLNDEPHGARSLYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHFFDGRIARKHRYKSLKREDISSVLPWLIEYTKAASARSRGPAREDRPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVL 752          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 6.600e-158
Identity = 262/645 (40.62%), Postives = 392/645 (60.78%), Query Frame = 3
Query:  354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            GCGA+H  +  L+   + DP  + R E L      +   ARP   + W+Q S G+   LD  ++ D   R++ V +V+         L  H   L+N +++     +    TPLS +R +KL ++LP +L S DG+++R+ R+ ++KRGDIS VLPWL+ YT+AA+AR R      +  D++++A   CR  G + +AARALL+D+ +P N++T+ ++ AKF  ED   +  A A AIAAS      G    WRP+ E++P+ L+  + S+++ S AGNDG RFSH + I+NT  G+E F   + S WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+   R ++  LGV L AY+DD+ L   ++T EN++ I  LV EL  +G+ +N  K   +PP  H  T  E   L   G+ +AE  G  VVG PIG DA+V+  A+ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   DN  +W+L
Sbjct:  112 GCGAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACKRLDNMVMWVL 753          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 511 bits (1317), Expect = 5.400e-156
Identity = 261/617 (42.30%), Postives = 395/617 (64.02%), Query Frame = 3
Query:  438 LGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRHRT--PGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            +GG+    S A   G  + W+Q+S G+   LD  T+ D   R+E V ++K  L      L  H  +L+N E++  R   P + TPLSLLRA+KL ++LPALL S DG+++R++R+ A+KRGDIS  LPWLM Y +AA++R R      +  D++++A   CR  G + +AARALL++  +P N++T+ ++ AKF  ED+ A+  A A AIA S+     G    WRP++E++P+ LI  + S+++ S AGNDG RFSH + I NT  G+E F   + S WRR +  P+ FPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VRQ++PKLEE+     Q+GVAV+GG E + + A+  HQ G+W+I  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  +++MD+GER  +   +G+ QGDG+GP L  + + PI+   ++++K LGV   AY+DD+ L + DLTEE+++A+  LV ELA +G+ +N  K   +PP  H+ T+++   L  +G++VA G G  VVG PIG D +V++ A+ V+ E GA+ LAR+L  M D+Q A LI + S   ++ ++ER +D  L+ +AC   DN   W L
Sbjct:  311 VGGMSEESSEA---GMLYGWNQNSPGVGPALDEVTMEDLTLRFETVKKIKPWLASDHARLQTHALNLVNKELAERRELPPRSGTPLSLLRAIKLWYLLPALLHSFDGRITRKERYKALKRGDISSTLPWLMEYAKAASSRSRGPVQEETQEDKFKRAEQACRHSGGVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVA-GEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 464 bits (1194), Expect = 4.560e-148
Identity = 251/633 (39.65%), Postives = 375/633 (59.24%), Query Frame = 3
Query:  411 PSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGM------AGP-LDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            P +  R    GGV     P A   R     +H          +GP LD  ++ D   R++ V +V+         L  H   L+N +++     +    TPLS +R +KL ++LP +L S DG+++R+ R+ ++KRGDIS VLPWL+  T+AA+AR R +    +  D++++A   CR  G + +AARALL+D+ +P N++T+ ++ AKF  ED   +  A A A AAS      G    WRP+ E++P+ L+  + S+++ S AGNDG RFSH + I+NT  G+E F   + S WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+   R ++  LGV L AY+DD+ L   ++T EN++ I  LV EL  +G+ +N  K   + P        E   L   G+ +AE  G  VVG PIG DA+V+  A+ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++ +LER ++ +L   AC   DN  +W+L
Sbjct:  147 PGADNRATRNGGVGGSMEPGATGNR----SEHPRSSTRCGVCSGPALDDVSMDDLSLRFQTVKKVQPRFASDHACLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIECTKAASARSRGSAREDTPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGINHKLVRGACERLDNMVMWVL 774          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 1.160e-131
Identity = 247/701 (35.24%), Postives = 366/701 (52.21%), Query Frame = 3
Query:  354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QC-ILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTD-------------------------------------------------------AFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            GCG +H  +  L+   + DP  + R E L      +   ARP   + W+Q S G+   LD  ++ D   R++ V +V+         L  H   L+N +++     +    TPLS +R +KL ++LP                     G IS VLPWL+ YT+AA+AR R      +  D++++A   CR  G + +AARALL+D+ +P N++T+ ++ AKF  ED   +  A A AIAAS      G    WRP+ E++P+ L+  + S+++ S AGNDG  FSH    I+NT  G+E F   + S WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVA +G  E + + A+  HQ GHW++  DC++                                                       AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+   R ++  LGV L AY+DD+ L   ++T E ++ I  LV EL  +G+ +N  K   +PP  H  T  E   L   G+ +AE  G  VVG PI  DA+V+  A+ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++  +ER ++ EL    C   DN  +W+L
Sbjct:  103 GCGDQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLP---------------------GVISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGCIERGINHELVRGVCERPDNMVMWVL 779          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 2.520e-120
Identity = 220/645 (34.11%), Postives = 338/645 (52.40%), Query Frame = 3
Query:  354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            GC A+H  +  L+   + DP  + R E L      +   ARP   + W+Q S G+   LD  ++ D   R++ V +V+         L  H   L+N +++     +    TPLS +R +KL ++LP +L S DG+++R+ R+   KRGDIS  LPWL+ YT+AA+AR R      +  D++++A   CR  G + +AARALL+D+ +P N++T+ ++ AKF +ED   +  A A AIAAS      G    WRP+ E++P  L+  + S+++   AGNDG RFSH + I+NT  G+E F   + S WRR +  P+AFPPEFW L+   ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GE   I   +G+ QGDG+GP L    + PI+   R ++  LG                                +                                                     +V+  ++ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   DN  +W+L
Sbjct:  119 GCEAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNWFKRGDISSALPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFTREDPVQVEQANAEAIAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASS---------------------------------------------------SXYVEDISMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVL 710          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 5.880e-117
Identity = 182/421 (43.23%), Postives = 262/421 (62.23%), Query Frame = 3
Query:  891 YRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPD 2153
            +++A   CR  G + +AARALL+D+ +P N++T+ ++ AKF  ED   +  A A AIAAS      G    WRP+ E++P+ L+  +  +++ S AGNDG RFSH + I+N   G+E F   +   WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+G R  I    G+ QGDG+GP L    + PI+   R ++  LGV L AY+DD+ L   ++T EN++ I  LV EL  +G+ +N  K   +PP  H  T  E   L   G+ +AE  G  VVG PIG DA+V+  A+ V+ E GAD LAR+L  MPD
Sbjct:   13 FKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPD 432          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 1.280e-112
Identity = 218/643 (33.90%), Postives = 325/643 (50.54%), Query Frame = 3
Query:  354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRHRTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            GCGA+H  +  L+   + +P  + R E L  +R  +         + W+Q SLG+   LD  ++ D   R++                                  G   PLS   +              DG+++R+ RF    RGDIS VLPWL+ YT+AA+AR R      +  D++++A   CR  G + +AA A L+D+ +P N++T+ ++ AKF  ED   +  A A AI AS      G    WRP+ E++P+  +  +  +++ S A NDG RFSH   I+NT  G+E F   + S WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A + P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+       K     LL          GD                                                 G+ +AE  G  +VG PIG DA+V+  A+ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   DN  +W+L
Sbjct:  103 GCGAQHSRKDSLEVAVQANPVLQLRAERL--IRGLNDEPHGARSLYIWNQDSLGIGPALDNISMDDLTLRFQT---------------------------------GPHFPLS--GSSNFGTSYQVFCTPFDGRIARKKRF----RGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAASAPLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAITASRTEEEEGSAPRWRPETEFDPQVFLQVINRRSSNSGADNDGQRFSHLTSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV------LKLRAKRLL----------GD------------------------------------------------AGLPIAE-EGITIVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVL 639          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 1.840e-109
Identity = 198/499 (39.68%), Postives = 286/499 (57.31%), Query Frame = 3
Query:  786 KRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            KRGDIS VLPWL+ YT+AA+AR R      +  D++++A   CR  G + +AARALL D+ +P N++T+ ++ AKF  ED   +  A A AIAAS      G    WRP+ E++P+ L+  + S+++ S AGNDG RFSH + I+NT  G+E F   + S WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVA +GG E + + A+  HQ GHW++  DC++AFN  KR A   + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+   R ++  +G               D+T                                   P ER +  L   G+ +AE  G  VVG  IG DA+V+  A+ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++ ++ER ++  L   AC L DN  +W+L
Sbjct:  264 KRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLVDQTSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHIG--------------HDVT-----------------------------------PAERRL--LGDPGLPIAE-EGITVVGVLIGTDAYVEDFAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHNLVRGACELLDNMVMWVL 710          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 1.020e-101
Identity = 166/379 (43.80%), Postives = 242/379 (63.85%), Query Frame = 3
Query: 1149 VRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLL-LEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
            + S+++ S AGNDG RFSH + I+NT  G+E F   + S WRR +  P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+   R ++  LGV L AY+DD++ L   ++T EN++ I  LV EL  +G+ +N  K   +PP  H  T  E   L   G+ +AE  G  VVG PIG DA+V+  A+ V+ E GAD LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   +N  +W+L
Sbjct:    8 INSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACERLENMVMWVL 385          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKQ2_9PHAE1.950e-15839.84Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE6.600e-15840.62Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE5.400e-15642.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE4.560e-14839.65Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE1.160e-13135.24Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KA96_9PHAE2.520e-12034.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR59_9PHAE5.880e-11743.23Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KAK8_9PHAE1.280e-11233.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K195_9PHAE1.840e-10939.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL14_9PHAE1.020e-10143.80Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15824contigH-paniculata_contig15824:3835..6116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size2282
Cds size402
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15824.3384.1prot_H-paniculata_contig15824.3384.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15824 5220..5621 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929263.1325727-UTR-H-paniculata_contig15824:3834..52191622929263.1325727-UTR-H-paniculata_contig15824:3834..5219Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15824 3835..5219 +
1691480792.529318-UTR-H-paniculata_contig15824:3834..52191691480792.529318-UTR-H-paniculata_contig15824:3834..5219Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15824 3835..5219 +
1622929263.16363-UTR-H-paniculata_contig15824:5621..61161622929263.16363-UTR-H-paniculata_contig15824:5621..6116Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15824 5622..6116 +
1691480792.5490036-UTR-H-paniculata_contig15824:5621..61161691480792.5490036-UTR-H-paniculata_contig15824:5621..6116Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15824 5622..6116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929263.148964-CDS-H-paniculata_contig15824:5219..56211622929263.148964-CDS-H-paniculata_contig15824:5219..5621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15824 5220..5621 +
1691480792.5392642-CDS-H-paniculata_contig15824:5219..56211691480792.5392642-CDS-H-paniculata_contig15824:5219..5621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15824 5220..5621 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15824.3384.1

>prot_H-paniculata_contig15824.3384.1 ID=prot_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGH
WLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMD
TGERSRISSNTGIHQGDGLGPALSYIPVGPILR*
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mRNA from alignment at H-paniculata_contig15824:3835..6116+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15824.3384.1 ID=mRNA_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2282bp|location=Sequence derived from alignment at H-paniculata_contig15824:3835..6116+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAGGGGGAGGCATTAATGACGTACCAGGTTCCCCGGGACTTAGTCCCTC CAGGAGGGGCGTCGGAGGACGCCTTCGACAGACCTCGCCGACGGCACGGG CAGCTGGACAGGGGAAAGGAGCAAGACGCCAAGACGGACGAGGACAAGGG CATGGTATTGGACGCGGACGTGGCAGCGAGCTTCCGAGGCTGGTCTTACG AGGAGCTCGCTGCGCCTGTTTTTCGACGGAGGTGGTGCGCGGGGTACGGG CTGTGGGGTTGCCATGCACTCACGCCCTGCACACCGTGTGCGTGCTTAAC ATAACATACTGGAACGCTCTCCGGCGCCGGGCCCGCTTTGCTGCCCGTAC CCAGGGTGCGGGGCGAGACATGACTATCAACTAGTGCTGGATTACGTCGC GCGGGAAGACCCAAGCAGCCGTGAGAGGGTAGAGACGCTCGGCGGGGTGC GCGCCGGCGATAGCCCCGCAGCCAGGCCGGGACGCTTCTTTGACTGGGAC CAACATAGCCTGGGTATGGCAGGACCTCTGGATCGCTACACGGTCGCCGA CTTCAAACAACGATACGAGATGGTCGTCCAGGTGAAGCACGGTCTCCAAC ACCACCTAGTATAACTCTTTTTGCACTGCACGGACCTCCTCAACCACGAA GTGAGCCGGCACCGGACGCCGGGAGCGGAGACGCCGCTATCCTTGCTGCG GGCAGTGAAGCTCAACCATGTTCTCCCGGCGTTGCTTCTATCTACCGACG GACAATTGTCCAGGAGGGACAGGTTCCTCGCAGTGAAGAGAGGGGACATC AGCGTCGTGCTCCCGTGGCTCATGGCGTACACGGAGGCCGCAGCCGCCCG CCGCCGGTCGACGACAGGGCGCAGGTCTACGGCGGACAGATACAGGAAGG CGATAGCTACGTGCAGGCGCCAAGGGGAGATCTCTAACGCGGCGAGAGCG TTGTTGTCGGACGAAGTCGCGCCTGCCAACGAGGATACATTTGGCAAAGT CAACGCGAAATTCGGCCAGGAGGATGCGCCCGCGCTGGCAGCGGCGAAAG CAGCGGCCATAGCGGCAAGCCTGGATTCTCTCGCTGCGGGCGGAGATGCC GCCTGGAGGCCAGACGACGAGTATAACCCCGAAACGCTGATAGCAGCTGT GAGGTCGAAGAACGCCCTGTCCGCGGCGGGTAACGATGGCCTACGTTTCT CCCATTAGCAGTGCATCCTGAACACCTCGGCCGGGAAGGAAGGTTTTGGC CCCGTGGTCGGGTCTTTCTGGCGGCGCTCCATGGAACAACCCGACGCCTT CCCGCCGGAGTTCTGGGAGCTGTTCCTCCAAAGAAACATCATGTCGCTCG GGTAGAAGTGCCGCCCGATCTACGTGGGATCTACGATGCGGCGTACTTTG GCCGCTGGGGTGGTCAGGCAATACAGGCCGAAACTGGAGGAGGTAAACTT GTCGGAGCGGCAGTACGGGGTAGCGGTCTCGGGCGGCGCGGAGCTCATGG GCCTCCGCGCGAAAGCACACCACCAACTGGGGCATTGGCTTATCGCCCTT GATTGTACCGATGCCTTCAACTCCGTCAAGCGGGCGGCGATCTGGGAAGA AGTGGCAATCCACACCCCGGGACTGACATCCTTCGTTGCCAAATGCTACG GGGAGAAGCCGGCAGATACCATTTTCCAGATGGACACCGGCGAACGCAGT AGAATCTCCTCGAACACGGGAATCCACCAGGGCGACGGACTGGGACCCGC CCTCTCCTACATACCCGTGGGACCGATCTTGCGCTAGTGCCGAGAACAAT TCAAGGCTCTAGGGGTGGAGCTATTGGCCTACCTGGACGATCTGCTGCTG GAAATAGGGGACCTGACGGAAGAAAATTTACGGGCGATCCATTTCCTCGT GCAAGAGTTAGCACGCATAGGAGTGCAGATCAACAACACCAAGATGAAGG TGGTGCCCCCAATGAACCATATCCCCACCGAAAGAGAGATCGCTGCGCTG GCAGCGATGGGCATCAGCGTCGCAGAGGGAAGGGGCGCGGTGGTGGTGGG TACACCGATTGGGGTCGATGCATTCGTTCAGCAGCACGCCGTCACTGTAG TCAAGGAAAACGGGGCAGATCACCTCGCGCGCCTACTAGCGCATATGCCC GACAAACAAGCAGCGATGCTGATCGCCACAAAGTCCAGGGCCCTCAAGAC CTGCTTCCTGGAGAGGGTGATGGATGCTGAACTCTCCGACCAAGCCTGCA CACTAACCGACAATGGCGGACTATGGATGTTG
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Coding sequence (CDS) from alignment at H-paniculata_contig15824:3835..6116+

>mRNA_H-paniculata_contig15824.3384.1 ID=mRNA_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig15824:3835..6116+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCGTACTTTGGCCGCTGGGGTGGTCAGGCAATACAGGCCGAAACT
GGAGGAGGTAAACTTGTCGGAGCGGCAGTACGGGGTAGCGGTCTCGGGCG
GCGCGGAGCTCATGGGCCTCCGCGCGAAAGCACACCACCAACTGGGGCAT
TGGCTTATCGCCCTTGATTGTACCGATGCCTTCAACTCCGTCAAGCGGGC
GGCGATCTGGGAAGAAGTGGCAATCCACACCCCGGGACTGACATCCTTCG
TTGCCAAATGCTACGGGGAGAAGCCGGCAGATACCATTTTCCAGATGGAC
ACCGGCGAACGCAGTAGAATCTCCTCGAACACGGGAATCCACCAGGGCGA
CGGACTGGGACCCGCCCTCTCCTACATACCCGTGGGACCGATCTTGCGCT
AGATGCGGCGTACTTTGGCCGCTGGGGTGGTCAGGCAATACAGGCCGAAA
CTGGAGGAGGTAAACTTGTCGGAGCGGCAGTACGGGGTAGCGGTCTCGGG
CGGCGCGGAGCTCATGGGCCTCCGCGCGAAAGCACACCACCAACTGGGGC
ATTGGCTTATCGCCCTTGATTGTACCGATGCCTTCAACTCCGTCAAGCGG
GCGGCGATCTGGGAAGAAGTGGCAATCCACACCCCGGGACTGACATCCTT
CGTTGCCAAATGCTACGGGGAGAAGCCGGCAGATACCATTTTCCAGATGG
ACACCGGCGAACGCAGTAGAATCTCCTCGAACACGGGAATCCACCAGGGC
GACGGACTGGGACCCGCCCTCTCCTACATACCCGTGGGACCGATCTTGCG
CTAG
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