mRNA_H-paniculata_contig15824.3384.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 488 bits (1255), Expect = 1.950e-158 Identity = 257/645 (39.84%), Postives = 386/645 (59.84%), Query Frame = 3
Query: 354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
GCGA+H + L+ + DP + R E+L +R + + W+Q S G+ LD ++ D R++ V +V+ L H L+N +++ + TPLS +R +KL ++LP +L DG+++R+ R+ ++KR DIS VLPWL+ YT+AA+AR R D++++A CR G + +AARALL+D+ +P N++T+ ++ AKF ED + A A AIAAS G WRP+ E++P+ L+ V +++ S AGNDG RFSH + I+NT G+E F + S WRR ++ P AFPPEFW L Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + + P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ R ++ LGV L AY+DD+ L D+T EN++ LV EL +G+ +N K +PP H T E L G+ +AE G VVG PIG DA+V+ A+ V+ E GA+ LARLL MPDKQ A L+ ++S ++ ++ER ++ +L AC DN +W+L
Sbjct: 111 GCGAQHSRRDSLEAAVQADPGLQLRAESL--IRGLNDEPHGARSLYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHFFDGRIARKHRYKSLKREDISSVLPWLIEYTKAASARSRGPAREDRPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVL 752
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 6.600e-158 Identity = 262/645 (40.62%), Postives = 392/645 (60.78%), Query Frame = 3
Query: 354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
GCGA+H + L+ + DP + R E L + ARP + W+Q S G+ LD ++ D R++ V +V+ L H L+N +++ + TPLS +R +KL ++LP +L S DG+++R+ R+ ++KRGDIS VLPWL+ YT+AA+AR R + D++++A CR G + +AARALL+D+ +P N++T+ ++ AKF ED + A A AIAAS G WRP+ E++P+ L+ + S+++ S AGNDG RFSH + I+NT G+E F + S WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + A P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ R ++ LGV L AY+DD+ L ++T EN++ I LV EL +G+ +N K +PP H T E L G+ +AE G VVG PIG DA+V+ A+ V+ E GAD LAR+L MPDKQ A L+ ++S ++ ++ER ++ +L AC DN +W+L
Sbjct: 112 GCGAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACKRLDNMVMWVL 753
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 511 bits (1317), Expect = 5.400e-156 Identity = 261/617 (42.30%), Postives = 395/617 (64.02%), Query Frame = 3
Query: 438 LGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRHRT--PGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
+GG+ S A G + W+Q+S G+ LD T+ D R+E V ++K L L H +L+N E++ R P + TPLSLLRA+KL ++LPALL S DG+++R++R+ A+KRGDIS LPWLM Y +AA++R R + D++++A CR G + +AARALL++ +P N++T+ ++ AKF ED+ A+ A A AIA S+ G WRP++E++P+ LI + S+++ S AGNDG RFSH + I NT G+E F + S WRR + P+ FPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VRQ++PKLEE+ Q+GVAV+GG E + + A+ HQ G+W+I DC++AFN+ KR AI + A P L ++A+CY E PA +++MD+GER + +G+ QGDG+GP L + + PI+ ++++K LGV AY+DD+ L + DLTEE+++A+ LV ELA +G+ +N K +PP H+ T+++ L +G++VA G G VVG PIG D +V++ A+ V+ E GA+ LAR+L M D+Q A LI + S ++ ++ER +D L+ +AC DN W L
Sbjct: 311 VGGMSEESSEA---GMLYGWNQNSPGVGPALDEVTMEDLTLRFETVKKIKPWLASDHARLQTHALNLVNKELAERRELPPRSGTPLSLLRAIKLWYLLPALLHSFDGRITRKERYKALKRGDISSTLPWLMEYAKAASSRSRGPVQEETQEDKFKRAEQACRHSGGVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVA-GEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 4.560e-148 Identity = 251/633 (39.65%), Postives = 375/633 (59.24%), Query Frame = 3
Query: 411 PSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGM------AGP-LDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
P + R GGV P A R +H +GP LD ++ D R++ V +V+ L H L+N +++ + TPLS +R +KL ++LP +L S DG+++R+ R+ ++KRGDIS VLPWL+ T+AA+AR R + + D++++A CR G + +AARALL+D+ +P N++T+ ++ AKF ED + A A A AAS G WRP+ E++P+ L+ + S+++ S AGNDG RFSH + I+NT G+E F + S WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + A P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ R ++ LGV L AY+DD+ L ++T EN++ I LV EL +G+ +N K + P E L G+ +AE G VVG PIG DA+V+ A+ V+ E GAD LAR+L MPDKQ A L+ ++S ++ +LER ++ +L AC DN +W+L
Sbjct: 147 PGADNRATRNGGVGGSMEPGATGNR----SEHPRSSTRCGVCSGPALDDVSMDDLSLRFQTVKKVQPRFASDHACLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIECTKAASARSRGSAREDTPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGINHKLVRGACERLDNMVMWVL 774
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 1.160e-131 Identity = 247/701 (35.24%), Postives = 366/701 (52.21%), Query Frame = 3
Query: 354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QC-ILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTD-------------------------------------------------------AFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
GCG +H + L+ + DP + R E L + ARP + W+Q S G+ LD ++ D R++ V +V+ L H L+N +++ + TPLS +R +KL ++LP G IS VLPWL+ YT+AA+AR R + D++++A CR G + +AARALL+D+ +P N++T+ ++ AKF ED + A A AIAAS G WRP+ E++P+ L+ + S+++ S AGNDG FSH I+NT G+E F + S WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVA +G E + + A+ HQ GHW++ DC++ AFN+ KR AI + A P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ R ++ LGV L AY+DD+ L ++T E ++ I LV EL +G+ +N K +PP H T E L G+ +AE G VVG PI DA+V+ A+ V+ E GAD LAR+L MPDKQ A L+ ++S ++ +ER ++ EL C DN +W+L
Sbjct: 103 GCGDQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLP---------------------GVISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGCIERGINHELVRGVCERPDNMVMWVL 779
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE) HSP 1 Score: 390 bits (1002), Expect = 2.520e-120 Identity = 220/645 (34.11%), Postives = 338/645 (52.40%), Query Frame = 3
Query: 354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRH--RTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
GC A+H + L+ + DP + R E L + ARP + W+Q S G+ LD ++ D R++ V +V+ L H L+N +++ + TPLS +R +KL ++LP +L S DG+++R+ R+ KRGDIS LPWL+ YT+AA+AR R + D++++A CR G + +AARALL+D+ +P N++T+ ++ AKF +ED + A A AIAAS G WRP+ E++P L+ + S+++ AGNDG RFSH + I+NT G+E F + S WRR + P+AFPPEFW L+ ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + A P L ++A+CY E PA I+ MD+GE I +G+ QGDG+GP L + PI+ R ++ LG + +V+ ++ V+ E GAD LAR+L MPDKQ A L+ ++S ++ ++ER ++ +L AC DN +W+L
Sbjct: 119 GCEAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNWFKRGDISSALPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFTREDPVQVEQANAEAIAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASS---------------------------------------------------SXYVEDISMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVL 710
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE) HSP 1 Score: 369 bits (946), Expect = 5.880e-117 Identity = 182/421 (43.23%), Postives = 262/421 (62.23%), Query Frame = 3
Query: 891 YRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPD 2153
+++A CR G + +AARALL+D+ +P N++T+ ++ AKF ED + A A AIAAS G WRP+ E++P+ L+ + +++ S AGNDG RFSH + I+N G+E F + WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + A P L ++A+CY E PA I+ MD+G R I G+ QGDG+GP L + PI+ R ++ LGV L AY+DD+ L ++T EN++ I LV EL +G+ +N K +PP H T E L G+ +AE G VVG PIG DA+V+ A+ V+ E GAD LAR+L MPD
Sbjct: 13 FKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPD 432
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE) HSP 1 Score: 368 bits (945), Expect = 1.280e-112 Identity = 218/643 (33.90%), Postives = 325/643 (50.54%), Query Frame = 3
Query: 354 GCGARHDYQLVLDYVAREDPSSRERVETLGGVRAGDSPAARPGRFFDWDQHSLGMAGPLDRYTVADFKQRYEMVVQVKHGLQHHLV*LFLHCTDLLNHEVSRHRTPGAETPLSLLRAVKLNHVLPALLLSTDGQLSRRDRFLAVKRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
GCGA+H + L+ + +P + R E L +R + + W+Q SLG+ LD ++ D R++ G PLS + DG+++R+ RF RGDIS VLPWL+ YT+AA+AR R + D++++A CR G + +AA A L+D+ +P N++T+ ++ AKF ED + A A AI AS G WRP+ E++P+ + + +++ S A NDG RFSH I+NT G+E F + S WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + A + P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ K LL GD G+ +AE G +VG PIG DA+V+ A+ V+ E GAD LAR+L MPDKQ A L+ ++S ++ ++ER ++ +L AC DN +W+L
Sbjct: 103 GCGAQHSRKDSLEVAVQANPVLQLRAERL--IRGLNDEPHGARSLYIWNQDSLGIGPALDNISMDDLTLRFQT---------------------------------GPHFPLS--GSSNFGTSYQVFCTPFDGRIARKKRF----RGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAASAPLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAITASRTEEEEGSAPRWRPETEFDPQVFLQVINRRSSNSGADNDGQRFSHLTSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV------LKLRAKRLL----------GD------------------------------------------------AGLPIAE-EGITIVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVL 639
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE) HSP 1 Score: 369 bits (946), Expect = 1.840e-109 Identity = 198/499 (39.68%), Postives = 286/499 (57.31%), Query Frame = 3
Query: 786 KRGDISVVLPWLMAYTEAAAARRRSTTGRRSTADRYRKAIATCRRQGEISNAARALLSDEVAPANEDTFGKVNAKFGQEDAPALAAAKAAAIAASLDSLAAGGDAAWRPDDEYNPETLIAAVRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLLLEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
KRGDIS VLPWL+ YT+AA+AR R + D++++A CR G + +AARALL D+ +P N++T+ ++ AKF ED + A A AIAAS G WRP+ E++P+ L+ + S+++ S AGNDG RFSH + I+NT G+E F + S WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVA +GG E + + A+ HQ GHW++ DC++AFN KR A + A P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ R ++ +G D+T P ER + L G+ +AE G VVG IG DA+V+ A+ V+ E GAD LAR+L MPDKQ A L+ ++S ++ ++ER ++ L AC L DN +W+L
Sbjct: 264 KRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLVDQTSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHIG--------------HDVT-----------------------------------PAERRL--LGDPGLPIAE-EGITVVGVLIGTDAYVEDFAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHNLVRGACELLDNMVMWVL 710
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 337 bits (863), Expect = 1.020e-101 Identity = 166/379 (43.80%), Postives = 242/379 (63.85%), Query Frame = 3
Query: 1149 VRSKNALSAAGNDGLRFSH*QCILNTSAGKEGFGPVVGSFWRRSMEQPDAFPPEFWELFLQRNIMSLG*KCRPIYVGSTMRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPILR*CREQFKALGVELLAYLDDLL-LEIGDLTEENLRAIHFLVQELARIGVQINNTKMKVVPPMNHIPTEREIAALAAMGISVAEGRGAVVVGTPIGVDAFVQQHAVTVVKENGADHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELSDQACTLTDNGGLWML 2282
+ S+++ S AGNDG RFSH + I+NT G+E F + S WRR + P+AFPPEFW L+ Q ++++LG KCRP+ +G T RR +AAG VR+++PKLEE+ Q+GVAV+GG E + + A+ HQ GHW++ DC++AFN+ KR AI + A P L ++A+CY E PA I+ MD+GER I +G+ QGDG+GP L + PI+ R ++ LGV L AY+DD++ L ++T EN++ I LV EL +G+ +N K +PP H T E L G+ +AE G VVG PIG DA+V+ A+ V+ E GAD LAR+L MPDKQ A L+ ++S ++ ++ER ++ +L AC +N +W+L
Sbjct: 8 INSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACERLENMVMWVL 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15824.3384.1 >prot_H-paniculata_contig15824.3384.1 ID=prot_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp MRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHback to top mRNA from alignment at H-paniculata_contig15824:3835..6116+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15824.3384.1 ID=mRNA_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2282bp|location=Sequence derived from alignment at H-paniculata_contig15824:3835..6116+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15824:3835..6116+ >mRNA_H-paniculata_contig15824.3384.1 ID=mRNA_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig15824:3835..6116+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |