prot_H-paniculata_contig15805.3373.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15805.3373.1
Unique Nameprot_H-paniculata_contig15805.3373.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
[Close]
BLAST of mRNA_H-paniculata_contig15805.3373.1 vs. uniprot
Match: A0A6H5KT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT97_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.590e-20
Identity = 43/83 (51.81%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:   18 ADRRRKKLQLPGLGGIAKGVAGLWDKVTEDHPAPLPVDKSLTHEERRRANVKLERQRRRSWQTNSIGEQHHVRAVLKLEEEKV 100
            ++RRR+ L    LGG+ KG+  +W+K++ DHP PLP+DK+LT E++R+ +++LERQRR  WQTNS+ EQH +R+VL+ +EEK+
Sbjct:  480 SERRRRGL----LGGLKKGMGVVWEKISADHPQPLPIDKTLTKEQQRQKHLRLERQRRNEWQTNSVAEQHVLRSVLQQQEEKI 558
[Close]
BLAST of mRNA_H-paniculata_contig15805.3373.1 vs. uniprot
Match: D7G224_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G224_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.140e-20
Identity = 44/83 (53.01%), Postives = 64/83 (77.11%), Query Frame = 0 
Query:   18 ADRRRKKLQLPGLGGIAKGVAGLWDKVTEDHPAPLPVDKSLTHEERRRANVKLERQRRRSWQTNSIGEQHHVRAVLKLEEEKV 100
            ++RRR+ L     GG+ KG+  +W+K+  DHP PLP+DK+LT E++R+ +++LERQRR  WQTNS+ EQH +R+VL+ EEEKV
Sbjct:  467 SERRRRGL----FGGLKKGMGVVWEKIAADHPQPLPIDKTLTKEQQRQKHLRLERQRRNEWQTNSVAEQHVLRSVLQQEEEKV 545
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15805.3373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KT97_9PHAE1.590e-2051.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G224_ECTSI2.140e-2053.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15805contigH-paniculata_contig15805:1131..5742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15805.3373.1mRNA_H-paniculata_contig15805.3373.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15805 891..5749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15805.3373.1 ID=prot_H-paniculata_contig15805.3373.1|Name=mRNA_H-paniculata_contig15805.3373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MRSRSLQSESGNSERESADRRRKKLQLPGLGGIAKGVAGLWDKVTEDHPA
PLPVDKSLTHEERRRANVKLERQRRRSWQTNSIGEQHHVRAVLKLEEEKV
YH*
back to top